RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 A0A1W2PRB8 838 aa11.2□□□□□ -0.62
TRAF4-209ENST00000473421 FAM234BA2RU67 622 aa11.2□□□□□ -0.62
TRAF4-209ENST00000473421 OIP5O43482 229 aa11.2□□□□□ -0.62
TRAF4-209ENST00000473421 ADAP00813 363 aa11.2□□□□□ -0.62
TRAF4-209ENST00000473421 CD3EP07766 207 aa11.2□□□□□ -0.62
TRAF4-209ENST00000473421 RBP1P09455 135 aa11.2□□□□□ -0.62
TRAF4-209ENST00000473421 ADH6P28332 368 aa11.2□□□□□ -0.62
TRAF4-209ENST00000473421 TIA1P31483 386 aaKnown RBP eCLIP11.2□□□□□ -0.62
TRAF4-209ENST00000473421 PAFAH1B1P43034 410 aa11.2□□□□□ -0.62
TRAF4-209ENST00000473421 NCBP2P52298 156 aaKnown RBP eCLIP11.2□□□□□ -0.62
TRAF4-209ENST00000473421 CLCQ05315 142 aa11.2□□□□□ -0.62
TRAF4-209ENST00000473421 C17orf67Q0P5P2 114 aa11.2□□□□□ -0.62
TRAF4-209ENST00000473421 ETFDHQ16134 617 aa11.2□□□□□ -0.62
TRAF4-209ENST00000473421 DECR1Q16698 335 aa11.2□□□□□ -0.62
TRAF4-209ENST00000473421 PLPPR5Q32ZL2 321 aa11.2□□□□□ -0.62
TRAF4-209ENST00000473421 SFRP5Q5T4F7 317 aa11.2□□□□□ -0.62
TRAF4-209ENST00000473421 IL17RELQ6ZVW7 336 aa11.2□□□□□ -0.62
TRAF4-209ENST00000473421 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.2□□□□□ -0.62
TRAF4-209ENST00000473421 CCDC91Q7Z6B0 441 aa11.2□□□□□ -0.62
TRAF4-209ENST00000473421 OR2L13Q8N349 312 aa11.2□□□□□ -0.62
TRAF4-209ENST00000473421 GTPBP8Q8N3Z3 284 aaPredicted RBP11.2□□□□□ -0.62
TRAF4-209ENST00000473421 OR10H5Q8NGA6 315 aa11.2□□□□□ -0.62
TRAF4-209ENST00000473421 OR2V1Q8NHB1 315 aa11.2□□□□□ -0.62
TRAF4-209ENST00000473421 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.2□□□□□ -0.62
TRAF4-209ENST00000473421 PIWIL2Q8TC59 973 aaKnown RBP11.2□□□□□ -0.62
TRAF4-209ENST00000473421 ELP4Q96EB1 424 aa11.2□□□□□ -0.62
TRAF4-209ENST00000473421 BBS4Q96RK4 519 aa11.2□□□□□ -0.62
TRAF4-209ENST00000473421 LMF2Q9BU23 707 aaKnown RBP11.2□□□□□ -0.62
TRAF4-209ENST00000473421 C1QTNF3Q9BXJ4 246 aa11.2□□□□□ -0.62
TRAF4-209ENST00000473421 TBL1XR1Q9BZK7 514 aa11.2□□□□□ -0.62
TRAF4-209ENST00000473421 MED17Q9NVC6 651 aa11.2□□□□□ -0.62
TRAF4-209ENST00000473421 NPAP1Q9NZP6 1156 aa11.2□□□□□ -0.62
TRAF4-209ENST00000473421 SENP1Q9P0U3 644 aa11.2□□□□□ -0.62
TRAF4-209ENST00000473421 ANK2Q01484 3957 aa11.19□□□□□ -0.62
TRAF4-209ENST00000473421 A0A087WV62 115 aa11.19□□□□□ -0.62
TRAF4-209ENST00000473421 UQCRHLA0A096LP55 91 aa11.19□□□□□ -0.62
TRAF4-209ENST00000473421 C9JVG2 144 aa11.19□□□□□ -0.62
TRAF4-209ENST00000473421 SMIM24O75264 130 aa11.19□□□□□ -0.62
TRAF4-209ENST00000473421 OXSR1O95747 527 aaPredicted RBP11.19□□□□□ -0.62
TRAF4-209ENST00000473421 MPIP34949 423 aa11.19□□□□□ -0.62
TRAF4-209ENST00000473421 SFTPDP35247 375 aa11.19□□□□□ -0.62
TRAF4-209ENST00000473421 MAP3K8P41279 467 aa11.19□□□□□ -0.62
TRAF4-209ENST00000473421 FOXA1P55317 472 aa11.19□□□□□ -0.62
TRAF4-209ENST00000473421 MRPS22P82650 360 aaKnown RBP11.19□□□□□ -0.62
TRAF4-209ENST00000473421 SLC7A5Q01650 507 aa11.19□□□□□ -0.62
TRAF4-209ENST00000473421 SLC18A2Q05940 514 aa11.19□□□□□ -0.62
TRAF4-209ENST00000473421 C2orf80Q0P641 193 aa11.19□□□□□ -0.62
TRAF4-209ENST00000473421 TMEM249Q2WGJ8 235 aa11.19□□□□□ -0.62
TRAF4-209ENST00000473421 HBMQ6B0K9 141 aa11.19□□□□□ -0.62
TRAF4-209ENST00000473421 DNAJC14Q6Y2X3 702 aaPredicted RBP11.19□□□□□ -0.62
TRAF4-209ENST00000473421 ZNF551Q7Z340 670 aaPredicted RBP11.19□□□□□ -0.62
TRAF4-209ENST00000473421 STEAP2Q8NFT2 490 aa11.19□□□□□ -0.62
TRAF4-209ENST00000473421 CDC26Q8NHZ8 85 aa11.19□□□□□ -0.62
TRAF4-209ENST00000473421 FBXO30Q8TB52 745 aa11.19□□□□□ -0.62
TRAF4-209ENST00000473421 ZNF775Q96BV0 537 aaPredicted RBP11.19□□□□□ -0.62
TRAF4-209ENST00000473421 DTNBP1Q96EV8 351 aa11.19□□□□□ -0.62
TRAF4-209ENST00000473421 OTUB1Q96FW1 271 aaPredicted RBP11.19□□□□□ -0.62
TRAF4-209ENST00000473421 SH3YL1Q96HL8 342 aaPredicted RBP11.19□□□□□ -0.62
TRAF4-209ENST00000473421 AMDHD1Q96NU7 426 aa11.19□□□□□ -0.62
TRAF4-209ENST00000473421 TMEM237Q96Q45 408 aa11.19□□□□□ -0.62
TRAF4-209ENST00000473421 TACO1Q9BSH4 297 aaKnown RBP11.19□□□□□ -0.62
TRAF4-209ENST00000473421 C19orf24Q9BVV8 132 aa11.19□□□□□ -0.62
TRAF4-209ENST00000473421 OR10A4Q9H209 315 aa11.19□□□□□ -0.62
TRAF4-209ENST00000473421 EQTNQ9NQ60 294 aa11.19□□□□□ -0.62
TRAF4-209ENST00000473421 ZDHHC18Q9NUE0 388 aa11.19□□□□□ -0.62
TRAF4-209ENST00000473421 NINJ2Q9NZG7 142 aa11.19□□□□□ -0.62
TRAF4-209ENST00000473421 PRSS50Q9UI38 385 aa11.19□□□□□ -0.62
TRAF4-209ENST00000473421 ING1Q9UK53 422 aaPredicted RBP11.19□□□□□ -0.62
TRAF4-209ENST00000473421 MCTS1Q9ULC4 181 aaKnown RBP11.19□□□□□ -0.62
TRAF4-209ENST00000473421 PLCE1Q9P212 2302 aa11.18□□□□□ -0.62
TRAF4-209ENST00000473421 IGHV3-15A0A0B4J1V0 119 aa11.18□□□□□ -0.62
TRAF4-209ENST00000473421 DLX3O60479 287 aa11.18□□□□□ -0.62
TRAF4-209ENST00000473421 COQ9O75208 318 aa11.18□□□□□ -0.62
TRAF4-209ENST00000473421 SYNGR4O95473 234 aa11.18□□□□□ -0.62
TRAF4-209ENST00000473421 TUBBP07437 444 aa11.18□□□□□ -0.62
TRAF4-209ENST00000473421 ANXA4P09525 319 aaPredicted RBP11.18□□□□□ -0.62
TRAF4-209ENST00000473421 ZNF17P17021 662 aa11.18□□□□□ -0.62
TRAF4-209ENST00000473421 DDCP20711 480 aa11.18□□□□□ -0.62
TRAF4-209ENST00000473421 ENPP1P22413 925 aa11.18□□□□□ -0.62
TRAF4-209ENST00000473421 RAC1P63000 192 aa11.18□□□□□ -0.62
TRAF4-209ENST00000473421 SPOCK1Q08629 439 aa11.18□□□□□ -0.62
TRAF4-209ENST00000473421 ACSM2AQ08AH3 577 aa11.18□□□□□ -0.62
TRAF4-209ENST00000473421 HEPACAMQ14CZ8 416 aa11.18□□□□□ -0.62
TRAF4-209ENST00000473421 CD226Q15762 336 aa11.18□□□□□ -0.62
TRAF4-209ENST00000473421 ZNF239Q16600 458 aaKnown RBP11.18□□□□□ -0.62
TRAF4-209ENST00000473421 CPTPQ5TA50 214 aa11.18□□□□□ -0.62
TRAF4-209ENST00000473421 ACSM2BQ68CK6 577 aa11.18□□□□□ -0.62
TRAF4-209ENST00000473421 FAM71E1Q6IPT2 247 aa11.18□□□□□ -0.62
TRAF4-209ENST00000473421 ANKRD26P1Q6NSI1 321 aa11.18□□□□□ -0.62
TRAF4-209ENST00000473421 GALNT18Q6P9A2 607 aa11.18□□□□□ -0.62
TRAF4-209ENST00000473421 DTX2Q86UW9 622 aa11.18□□□□□ -0.62
TRAF4-209ENST00000473421 WDR75Q8IWA0 830 aaKnown RBP11.18□□□□□ -0.62
TRAF4-209ENST00000473421 RNF128Q8TEB7 428 aa11.18□□□□□ -0.62
TRAF4-209ENST00000473421 EGLN2Q96KS0 407 aa11.18□□□□□ -0.62
TRAF4-209ENST00000473421 HS6ST2Q96MM7 605 aa11.18□□□□□ -0.62
TRAF4-209ENST00000473421 Q9N2J8 555 aa11.18□□□□□ -0.62
TRAF4-209ENST00000473421 DDX18Q9NVP1 670 aaKnown RBP11.18□□□□□ -0.62
TRAF4-209ENST00000473421 CISD1Q9NZ45 108 aaKnown RBP11.18□□□□□ -0.62
TRAF4-209ENST00000473421 SLC35F4A4IF30 521 aa11.17□□□□□ -0.62
TRAF4-209ENST00000473421 ALG1L2C9J202 215 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms