RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 IFNA8P32881 189 aa19.69■□□□□ 0.74
COL18A1-207ENST00000473212 PRMT2P55345 433 aa19.69■□□□□ 0.74
COL18A1-207ENST00000473212 RGS8P57771 180 aaPredicted RBP19.69■□□□□ 0.74
COL18A1-207ENST00000473212 STXBP1P61764 594 aaKnown RBP19.69■□□□□ 0.74
COL18A1-207ENST00000473212 ZNF620Q6ZNG0 422 aa19.69■□□□□ 0.74
COL18A1-207ENST00000473212 DNAJC5GQ8N7S2 189 aa19.69■□□□□ 0.74
COL18A1-207ENST00000473212 KCT2Q8NC54 265 aa19.69■□□□□ 0.74
COL18A1-207ENST00000473212 OR52E1Q8NGJ3 308 aa19.69■□□□□ 0.74
COL18A1-207ENST00000473212 COL26A1Q96A83 441 aa19.69■□□□□ 0.74
COL18A1-207ENST00000473212 NACC2Q96BF6 587 aa19.69■□□□□ 0.74
COL18A1-207ENST00000473212 SAMD8Q96LT4 415 aa19.69■□□□□ 0.74
COL18A1-207ENST00000473212 TBX5Q99593 518 aa19.69■□□□□ 0.74
COL18A1-207ENST00000473212 MED20Q9H944 212 aa19.69■□□□□ 0.74
COL18A1-207ENST00000473212 MRPS30Q9NP92 439 aaKnown RBP19.69■□□□□ 0.74
COL18A1-207ENST00000473212 CES1P1Q9UKY3 287 aa19.69■□□□□ 0.74
COL18A1-207ENST00000473212 DNAJB6O75190 326 aa19.69■□□□□ 0.74
COL18A1-207ENST00000473212 RAB28P51157 221 aa19.69■□□□□ 0.74
COL18A1-207ENST00000473212 PRR5P85299 388 aa19.69■□□□□ 0.74
COL18A1-207ENST00000473212 C19orf57Q0VDD7 668 aa19.69■□□□□ 0.74
COL18A1-207ENST00000473212 ZIC1Q15915 447 aa19.69■□□□□ 0.74
COL18A1-207ENST00000473212 AGBL4Q5VU57 503 aa19.69■□□□□ 0.74
COL18A1-207ENST00000473212 GDF7Q7Z4P5 450 aa19.69■□□□□ 0.74
COL18A1-207ENST00000473212 OR4N5Q8IXE1 308 aa19.69■□□□□ 0.74
COL18A1-207ENST00000473212 GJD3Q8N144 294 aa19.69■□□□□ 0.74
COL18A1-207ENST00000473212 SLC16A11Q8NCK7 471 aa19.69■□□□□ 0.74
COL18A1-207ENST00000473212 CREB3L1Q96BA8 519 aa19.69■□□□□ 0.74
COL18A1-207ENST00000473212 RGS9O75916 674 aaPredicted RBP19.68■□□□□ 0.74
COL18A1-207ENST00000473212 TFPIP10646 304 aa19.68■□□□□ 0.74
COL18A1-207ENST00000473212 AHRP35869 848 aa19.68■□□□□ 0.74
COL18A1-207ENST00000473212 DECR1Q16698 335 aa19.68■□□□□ 0.74
COL18A1-207ENST00000473212 TMEM44Q2T9K0 475 aa19.68■□□□□ 0.74
COL18A1-207ENST00000473212 CEP78Q5JTW2 689 aa19.68■□□□□ 0.74
COL18A1-207ENST00000473212 C16orf62Q7Z3J2 963 aa19.68■□□□□ 0.74
COL18A1-207ENST00000473212 OR5H6Q8NGV6 325 aa19.68■□□□□ 0.74
COL18A1-207ENST00000473212 MCHR1Q99705 422 aa19.68■□□□□ 0.74
COL18A1-207ENST00000473212 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.68■□□□□ 0.74
COL18A1-207ENST00000473212 A0A1W2PP55 124 aa19.68■□□□□ 0.74
COL18A1-207ENST00000473212 C12orf71A8MTZ7 269 aa19.68■□□□□ 0.74
COL18A1-207ENST00000473212 EMC8O43402 210 aa19.68■□□□□ 0.74
COL18A1-207ENST00000473212 MYOGP15173 224 aa19.68■□□□□ 0.74
COL18A1-207ENST00000473212 PRAMEF8Q5VWM4 474 aa19.68■□□□□ 0.74
COL18A1-207ENST00000473212 PRAMEF7Q5VXH5 474 aa19.68■□□□□ 0.74
COL18A1-207ENST00000473212 MRM1Q6IN84 353 aaKnown RBP19.68■□□□□ 0.74
COL18A1-207ENST00000473212 SMARCD3Q6STE5 483 aa19.68■□□□□ 0.74
COL18A1-207ENST00000473212 CREB3L2Q70SY1 520 aa19.68■□□□□ 0.74
COL18A1-207ENST00000473212 OR2T33Q8NG76 320 aa19.68■□□□□ 0.74
COL18A1-207ENST00000473212 NR4A3Q92570 626 aa19.68■□□□□ 0.74
COL18A1-207ENST00000473212 SLC41A3Q96GZ6 507 aa19.68■□□□□ 0.74
COL18A1-207ENST00000473212 ENKD1Q9H0I2 346 aa19.68■□□□□ 0.74
COL18A1-207ENST00000473212 PPIL3Q9H2H8 161 aaKnown RBP19.68■□□□□ 0.74
COL18A1-207ENST00000473212 WDR26Q9H7D7 661 aa19.68■□□□□ 0.74
COL18A1-207ENST00000473212 TMEM74BQ9NUR3 256 aa19.68■□□□□ 0.74
COL18A1-207ENST00000473212 KNL1Q8NG31 2342 aa19.68■□□□□ 0.74
COL18A1-207ENST00000473212 F3P13726 295 aa19.67■□□□□ 0.74
COL18A1-207ENST00000473212 CSNK2A2P19784 350 aaPredicted RBP19.67■□□□□ 0.74
COL18A1-207ENST00000473212 SLC6A1P30531 599 aa19.67■□□□□ 0.74
COL18A1-207ENST00000473212 OR3A3P47888 321 aa19.67■□□□□ 0.74
COL18A1-207ENST00000473212 KRT33BQ14525 404 aa19.67■□□□□ 0.74
COL18A1-207ENST00000473212 ARHGEF6Q15052 776 aa19.67■□□□□ 0.74
COL18A1-207ENST00000473212 TMEM35AQ53FP2 167 aa19.67■□□□□ 0.74
COL18A1-207ENST00000473212 CCNJQ5T5M9 372 aa19.67■□□□□ 0.74
COL18A1-207ENST00000473212 C1orf53Q5VUE5 145 aa19.67■□□□□ 0.74
COL18A1-207ENST00000473212 PLBD1Q6P4A8 553 aa19.67■□□□□ 0.74
COL18A1-207ENST00000473212 CXXC5Q7LFL8 322 aaKnown RBP19.67■□□□□ 0.74
COL18A1-207ENST00000473212 ELP4Q96EB1 424 aa19.67■□□□□ 0.74
COL18A1-207ENST00000473212 SLC35A4Q96G79 324 aa19.67■□□□□ 0.74
COL18A1-207ENST00000473212 THAP7Q9BT49 309 aaPredicted RBP19.67■□□□□ 0.74
COL18A1-207ENST00000473212 MED17Q9NVC6 651 aa19.67■□□□□ 0.74
COL18A1-207ENST00000473212 KLHL28Q9NXS3 571 aa19.67■□□□□ 0.74
COL18A1-207ENST00000473212 TEKT2Q9UIF3 430 aa19.67■□□□□ 0.74
COL18A1-207ENST00000473212 KLF4O43474 513 aa19.67■□□□□ 0.74
COL18A1-207ENST00000473212 HYAL3O43820 417 aaPredicted RBP19.67■□□□□ 0.74
COL18A1-207ENST00000473212 EIF4EP06730 217 aaKnown RBP19.67■□□□□ 0.74
COL18A1-207ENST00000473212 IFI30P13284 250 aa19.67■□□□□ 0.74
COL18A1-207ENST00000473212 GCGRP47871 477 aa19.67■□□□□ 0.74
COL18A1-207ENST00000473212 ATP12AP54707 1039 aa19.67■□□□□ 0.74
COL18A1-207ENST00000473212 SLC48A1Q6P1K1 146 aa19.67■□□□□ 0.74
COL18A1-207ENST00000473212 OR5M3Q8NGP4 307 aa19.67■□□□□ 0.74
COL18A1-207ENST00000473212 SMAP2Q8WU79 429 aaPredicted RBP19.67■□□□□ 0.74
COL18A1-207ENST00000473212 ACOT12Q8WYK0 555 aa19.67■□□□□ 0.74
COL18A1-207ENST00000473212 ANKRD19PQ9H560 264 aa19.67■□□□□ 0.74
COL18A1-207ENST00000473212 SLC23A1Q9UHI7 598 aa19.67■□□□□ 0.74
COL18A1-207ENST00000473212 GIMAP1-GIMAP5A0A087WTJ2 511 aa19.66■□□□□ 0.74
COL18A1-207ENST00000473212 A0A0A6YYJ9 748 aa19.66■□□□□ 0.74
COL18A1-207ENST00000473212 GSAPA4D1B5 854 aa19.66■□□□□ 0.74
COL18A1-207ENST00000473212 C1QTNF3-AMACRE9PGA6 284 aa19.66■□□□□ 0.74
COL18A1-207ENST00000473212 TSC22D2O75157 780 aa19.66■□□□□ 0.74
COL18A1-207ENST00000473212 NDUFV2P19404 249 aa19.66■□□□□ 0.74
COL18A1-207ENST00000473212 SHC1P29353 583 aa19.66■□□□□ 0.74
COL18A1-207ENST00000473212 FAM27D1Q5T7N8 215 aa19.66■□□□□ 0.74
COL18A1-207ENST00000473212 FAM205BPQ63HN1 556 aa19.66■□□□□ 0.74
COL18A1-207ENST00000473212 MBOAT2Q6ZWT7 520 aa19.66■□□□□ 0.74
COL18A1-207ENST00000473212 ZNF767PQ75MW2 155 aa19.66■□□□□ 0.74
COL18A1-207ENST00000473212 ADGRD2Q7Z7M1 963 aa19.66■□□□□ 0.74
COL18A1-207ENST00000473212 MOAP1Q96BY2 351 aa19.66■□□□□ 0.74
COL18A1-207ENST00000473212 GIMAP5Q96F15 307 aa19.66■□□□□ 0.74
COL18A1-207ENST00000473212 HDAC8Q9BY41 377 aa19.66■□□□□ 0.74
COL18A1-207ENST00000473212 SYNDIG1Q9H7V2 258 aa19.66■□□□□ 0.74
COL18A1-207ENST00000473212 ENAMQ9NRM1 1142 aa19.66■□□□□ 0.74
COL18A1-207ENST00000473212 CYSLTR2Q9NS75 346 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms