RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 DUSP2Q05923 314 aa8.18□□□□□ -1.1
CPSF4-211ENST00000471455 C17orf67Q0P5P2 114 aa8.18□□□□□ -1.1
CPSF4-211ENST00000471455 GUSBP1Q15486 140 aa8.18□□□□□ -1.1
CPSF4-211ENST00000471455 SH2D4BQ5SQS7 431 aa8.18□□□□□ -1.1
CPSF4-211ENST00000471455 ANKRD34AQ69YU3 496 aa8.18□□□□□ -1.1
CPSF4-211ENST00000471455 GTF2IRD2BQ6EKJ0 949 aa8.18□□□□□ -1.1
CPSF4-211ENST00000471455 LETMD1Q6P1Q0 360 aa8.18□□□□□ -1.1
CPSF4-211ENST00000471455 GTF2IRD2Q86UP8 949 aa8.18□□□□□ -1.1
CPSF4-211ENST00000471455 EXOC3L1Q86VI1 746 aa8.18□□□□□ -1.1
CPSF4-211ENST00000471455 WDR75Q8IWA0 830 aaKnown RBP8.18□□□□□ -1.1
CPSF4-211ENST00000471455 STEAP2Q8NFT2 490 aa8.18□□□□□ -1.1
CPSF4-211ENST00000471455 IGFBPL1Q8WX77 278 aa8.18□□□□□ -1.1
CPSF4-211ENST00000471455 PLPPR2Q96GM1 343 aa8.18□□□□□ -1.1
CPSF4-211ENST00000471455 C1QTNF3Q9BXJ4 246 aa8.18□□□□□ -1.1
CPSF4-211ENST00000471455 ACTR6Q9GZN1 396 aa8.18□□□□□ -1.1
CPSF4-211ENST00000471455 IQCGQ9H095 443 aaKnown RBP8.18□□□□□ -1.1
CPSF4-211ENST00000471455 ACSS3Q9H6R3 686 aa8.18□□□□□ -1.1
CPSF4-211ENST00000471455 MIEF1Q9NQG6 463 aa8.18□□□□□ -1.1
CPSF4-211ENST00000471455 PLSCR4Q9NRQ2 329 aa8.18□□□□□ -1.1
CPSF4-211ENST00000471455 FARSBQ9NSD9 589 aaKnown RBP8.18□□□□□ -1.1
CPSF4-211ENST00000471455 DDX18Q9NVP1 670 aaKnown RBP8.18□□□□□ -1.1
CPSF4-211ENST00000471455 MED11Q9P086 117 aa8.18□□□□□ -1.1
CPSF4-211ENST00000471455 GRID1Q9ULK0 1009 aa8.18□□□□□ -1.1
CPSF4-211ENST00000471455 IGLV3-32A0A0A0MS00 114 aa8.17□□□□□ -1.1
CPSF4-211ENST00000471455 RNF212BA8MTL3 300 aa8.17□□□□□ -1.1
CPSF4-211ENST00000471455 MANBAO00462 879 aa8.17□□□□□ -1.1
CPSF4-211ENST00000471455 EIF1AYO14602 144 aaKnown RBP8.17□□□□□ -1.1
CPSF4-211ENST00000471455 FADS1O60427 444 aa8.17□□□□□ -1.1
CPSF4-211ENST00000471455 DLX3O60479 287 aa8.17□□□□□ -1.1
CPSF4-211ENST00000471455 ALX3O95076 343 aa8.17□□□□□ -1.1
CPSF4-211ENST00000471455 KCNH1O95259 989 aa8.17□□□□□ -1.1
CPSF4-211ENST00000471455 IL33O95760 270 aa8.17□□□□□ -1.1
CPSF4-211ENST00000471455 ENO1P06733 434 aaKnown RBP8.17□□□□□ -1.1
CPSF4-211ENST00000471455 TUBBP07437 444 aa8.17□□□□□ -1.1
CPSF4-211ENST00000471455 PSMB1P20618 241 aaKnown RBP8.17□□□□□ -1.1
CPSF4-211ENST00000471455 IL11P20809 199 aa8.17□□□□□ -1.1
CPSF4-211ENST00000471455 ME2P23368 584 aa8.17□□□□□ -1.1
CPSF4-211ENST00000471455 TIA1P31483 386 aaKnown RBP eCLIP8.17□□□□□ -1.1
CPSF4-211ENST00000471455 MAGEA12P43365 314 aa8.17□□□□□ -1.1
CPSF4-211ENST00000471455 NCBP2P52298 156 aaKnown RBP eCLIP8.17□□□□□ -1.1
CPSF4-211ENST00000471455 SUCLG1P53597 346 aaKnown RBP8.17□□□□□ -1.1
CPSF4-211ENST00000471455 CLDN20P56880 219 aa8.17□□□□□ -1.1
CPSF4-211ENST00000471455 C2orf54Q08AI8 447 aa8.17□□□□□ -1.1
CPSF4-211ENST00000471455 TNK1Q13470 666 aa8.17□□□□□ -1.1
CPSF4-211ENST00000471455 CLEC12BQ2HXU8 276 aa8.17□□□□□ -1.1
CPSF4-211ENST00000471455 VPS26BQ4G0F5 336 aa8.17□□□□□ -1.1
CPSF4-211ENST00000471455 LGSNQ5TDP6 509 aa8.17□□□□□ -1.1
CPSF4-211ENST00000471455 FAM180BQ6P0A1 224 aa8.17□□□□□ -1.1
CPSF4-211ENST00000471455 STAC2Q6ZMT1 411 aa8.17□□□□□ -1.1
CPSF4-211ENST00000471455 GPRIN3Q6ZVF9 776 aa8.17□□□□□ -1.1
CPSF4-211ENST00000471455 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.17□□□□□ -1.1
CPSF4-211ENST00000471455 PLD6Q8N2A8 252 aaKnown RBP8.17□□□□□ -1.1
CPSF4-211ENST00000471455 MMGT1Q8N4V1 131 aa8.17□□□□□ -1.1
CPSF4-211ENST00000471455 CDYL2Q8N8U2 506 aa8.17□□□□□ -1.1
CPSF4-211ENST00000471455 OR7G2Q8NG99 324 aa8.17□□□□□ -1.1
CPSF4-211ENST00000471455 FBXW5Q969U6 566 aa8.17□□□□□ -1.1
CPSF4-211ENST00000471455 ZBTB8AQ96BR9 441 aa8.17□□□□□ -1.1
CPSF4-211ENST00000471455 REXO5Q96IC2 774 aaKnown RBP8.17□□□□□ -1.1
CPSF4-211ENST00000471455 ZNF382Q96SR6 550 aa8.17□□□□□ -1.1
CPSF4-211ENST00000471455 HBEGFQ99075 208 aa8.17□□□□□ -1.1
CPSF4-211ENST00000471455 TMEM204Q9BSN7 226 aa8.17□□□□□ -1.1
CPSF4-211ENST00000471455 HDHD5Q9BXW7 423 aa8.17□□□□□ -1.1
CPSF4-211ENST00000471455 TSPYL1Q9H0U9 437 aa8.17□□□□□ -1.1
CPSF4-211ENST00000471455 ESRP2Q9H6T0 727 aaKnown RBP8.17□□□□□ -1.1
CPSF4-211ENST00000471455 LRTM1Q9HBL6 345 aa8.17□□□□□ -1.1
CPSF4-211ENST00000471455 BARX1Q9HBU1 254 aaPredicted RBP8.17□□□□□ -1.1
CPSF4-211ENST00000471455 ADAM21Q9UKJ8 722 aa8.17□□□□□ -1.1
CPSF4-211ENST00000471455 WBP11Q9Y2W2 641 aaKnown RBP8.17□□□□□ -1.1
CPSF4-211ENST00000471455 RNF115Q9Y4L5 304 aa8.17□□□□□ -1.1
CPSF4-211ENST00000471455 ZANQ9Y493 2812 aa8.17□□□□□ -1.1
CPSF4-211ENST00000471455 ABCA1O95477 2261 aa8.17□□□□□ -1.1
CPSF4-211ENST00000471455 C7orf72A4D263 438 aa8.16□□□□□ -1.1
CPSF4-211ENST00000471455 A8MT66 165 aa8.16□□□□□ -1.1
CPSF4-211ENST00000471455 H0YC42 278 aa8.16□□□□□ -1.1
CPSF4-211ENST00000471455 KLF4O43474 513 aa8.16□□□□□ -1.1
CPSF4-211ENST00000471455 AQP8O94778 261 aa8.16□□□□□ -1.1
CPSF4-211ENST00000471455 SUPT7LO94864 414 aa8.16□□□□□ -1.1
CPSF4-211ENST00000471455 OR4F21O95013 312 aa8.16□□□□□ -1.1
CPSF4-211ENST00000471455 THBDP07204 575 aa8.16□□□□□ -1.1
CPSF4-211ENST00000471455 CD3EP07766 207 aa8.16□□□□□ -1.1
CPSF4-211ENST00000471455 IFI6P09912 130 aa8.16□□□□□ -1.1
CPSF4-211ENST00000471455 DDCP20711 480 aa8.16□□□□□ -1.1
CPSF4-211ENST00000471455 IL32P24001 234 aa8.16□□□□□ -1.1
CPSF4-211ENST00000471455 RFX3P48380 749 aa8.16□□□□□ -1.1
CPSF4-211ENST00000471455 ZNF41P51814 821 aaPredicted RBP8.16□□□□□ -1.1
CPSF4-211ENST00000471455 CDH13P55290 713 aa8.16□□□□□ -1.1
CPSF4-211ENST00000471455 TPD52P55327 224 aaPredicted RBP8.16□□□□□ -1.1
CPSF4-211ENST00000471455 PRR5P85299 388 aa8.16□□□□□ -1.1
CPSF4-211ENST00000471455 PSG6Q00889 435 aa8.16□□□□□ -1.1
CPSF4-211ENST00000471455 CLCQ05315 142 aa8.16□□□□□ -1.1
CPSF4-211ENST00000471455 ZNF763Q0D2J5 394 aa8.16□□□□□ -1.1
CPSF4-211ENST00000471455 TCHHL1Q5QJ38 904 aaPredicted RBP8.16□□□□□ -1.1
CPSF4-211ENST00000471455 HMBOX1Q6NT76 420 aa8.16□□□□□ -1.1
CPSF4-211ENST00000471455 ADAM5Q6NVV9 412 aa8.16□□□□□ -1.1
CPSF4-211ENST00000471455 GALNT18Q6P9A2 607 aa8.16□□□□□ -1.1
CPSF4-211ENST00000471455 TMEM107Q6UX40 140 aa8.16□□□□□ -1.1
CPSF4-211ENST00000471455 ZDHHC24Q6UX98 284 aa8.16□□□□□ -1.1
CPSF4-211ENST00000471455 ESPNLQ6ZVH7 1005 aa8.16□□□□□ -1.1
CPSF4-211ENST00000471455 SSX8Q7RTT4 187 aa8.16□□□□□ -1.1
CPSF4-211ENST00000471455 LCA5Q86VQ0 697 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms