RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 FAM120AOSQ5T036 256 aa16.84■□□□□ 0.29
NCKIPSD-209ENST00000470006 MROH9Q5TGP6 573 aa16.84■□□□□ 0.29
NCKIPSD-209ENST00000470006 FAM166AQ6J272 317 aa16.84■□□□□ 0.29
NCKIPSD-209ENST00000470006 TFAP2EQ6VUC0 442 aa16.84■□□□□ 0.29
NCKIPSD-209ENST00000470006 CYS1Q717R9 158 aa16.84■□□□□ 0.29
NCKIPSD-209ENST00000470006 CTAGE4Q8IX94 777 aa16.84■□□□□ 0.29
NCKIPSD-209ENST00000470006 TUSC5Q8IXB3 177 aa16.84■□□□□ 0.29
NCKIPSD-209ENST00000470006 PIAS4Q8N2W9 510 aaPredicted RBP16.84■□□□□ 0.29
NCKIPSD-209ENST00000470006 CDYL2Q8N8U2 506 aa16.84■□□□□ 0.29
NCKIPSD-209ENST00000470006 ABHD3Q8WU67 409 aa16.84■□□□□ 0.29
NCKIPSD-209ENST00000470006 MUCL1Q96DR8 90 aa16.84■□□□□ 0.29
NCKIPSD-209ENST00000470006 MRRFQ96E11 262 aaKnown RBP16.84■□□□□ 0.29
NCKIPSD-209ENST00000470006 ADGRG7Q96K78 797 aa16.84■□□□□ 0.29
NCKIPSD-209ENST00000470006 RNF145Q96MT1 663 aa16.84■□□□□ 0.29
NCKIPSD-209ENST00000470006 HBEGFQ99075 208 aa16.84■□□□□ 0.29
NCKIPSD-209ENST00000470006 USB1Q9BQ65 265 aaKnown RBP16.84■□□□□ 0.29
NCKIPSD-209ENST00000470006 SLC35C2Q9NQQ7 365 aa16.84■□□□□ 0.29
NCKIPSD-209ENST00000470006 SNX6Q9UNH7 406 aa16.84■□□□□ 0.29
NCKIPSD-209ENST00000470006 A0A087WZY1 265 aa16.83■□□□□ 0.28
NCKIPSD-209ENST00000470006 A0A0J9YW62 118 aa16.83■□□□□ 0.28
NCKIPSD-209ENST00000470006 LOC100289279A0A1B0GTE1 492 aa16.83■□□□□ 0.28
NCKIPSD-209ENST00000470006 SHISA9B4DS77 424 aa16.83■□□□□ 0.28
NCKIPSD-209ENST00000470006 ADAMDEC1O15204 470 aa16.83■□□□□ 0.28
NCKIPSD-209ENST00000470006 SPRY1O43609 319 aaPredicted RBP16.83■□□□□ 0.28
NCKIPSD-209ENST00000470006 KLHL2O95198 593 aa16.83■□□□□ 0.28
NCKIPSD-209ENST00000470006 IL33O95760 270 aa16.83■□□□□ 0.28
NCKIPSD-209ENST00000470006 GZMKP49863 264 aa16.83■□□□□ 0.28
NCKIPSD-209ENST00000470006 LSM11P83369 360 aaKnown RBP eCLIP16.83■□□□□ 0.28
NCKIPSD-209ENST00000470006 CALCOCO2Q13137 446 aa16.83■□□□□ 0.28
NCKIPSD-209ENST00000470006 ITGADQ13349 1161 aa16.83■□□□□ 0.28
NCKIPSD-209ENST00000470006 P2RY6Q15077 328 aa16.83■□□□□ 0.28
NCKIPSD-209ENST00000470006 CCDC91Q7Z6B0 441 aa16.83■□□□□ 0.28
NCKIPSD-209ENST00000470006 FBXL14Q8N1E6 418 aa16.83■□□□□ 0.28
NCKIPSD-209ENST00000470006 PLA2G12AQ9BZM1 189 aa16.83■□□□□ 0.28
NCKIPSD-209ENST00000470006 BRF2Q9HAW0 419 aa16.83■□□□□ 0.28
NCKIPSD-209ENST00000470006 TIGARQ9NQ88 270 aa16.83■□□□□ 0.28
NCKIPSD-209ENST00000470006 VPS29Q9UBQ0 182 aa16.83■□□□□ 0.28
NCKIPSD-209ENST00000470006 PCTPQ9UKL6 214 aa16.83■□□□□ 0.28
NCKIPSD-209ENST00000470006 A0A096LPK6 155 aa16.82■□□□□ 0.28
NCKIPSD-209ENST00000470006 KIAA0513O60268 411 aa16.82■□□□□ 0.28
NCKIPSD-209ENST00000470006 LYZL6O75951 148 aa16.82■□□□□ 0.28
NCKIPSD-209ENST00000470006 PGRP06401 933 aa16.82■□□□□ 0.28
NCKIPSD-209ENST00000470006 GSTA2P09210 222 aa16.82■□□□□ 0.28
NCKIPSD-209ENST00000470006 SFTPDP35247 375 aa16.82■□□□□ 0.28
NCKIPSD-209ENST00000470006 ZNF41P51814 821 aaPredicted RBP16.82■□□□□ 0.28
NCKIPSD-209ENST00000470006 SQLEQ14534 574 aa16.82■□□□□ 0.28
NCKIPSD-209ENST00000470006 HEPACAMQ14CZ8 416 aa16.82■□□□□ 0.28
NCKIPSD-209ENST00000470006 RNPS1Q15287 305 aaKnown RBP16.82■□□□□ 0.28
NCKIPSD-209ENST00000470006 CPTPQ5TA50 214 aa16.82■□□□□ 0.28
NCKIPSD-209ENST00000470006 TMEM107Q6UX40 140 aa16.82■□□□□ 0.28
NCKIPSD-209ENST00000470006 GTPBP8Q8N3Z3 284 aaPredicted RBP16.82■□□□□ 0.28
NCKIPSD-209ENST00000470006 NPAS1Q99742 590 aa16.82■□□□□ 0.28
NCKIPSD-209ENST00000470006 VPS11Q9H270 941 aa16.82■□□□□ 0.28
NCKIPSD-209ENST00000470006 DPH5Q9H2P9 285 aa16.82■□□□□ 0.28
NCKIPSD-209ENST00000470006 C12orf65Q9H3J6 166 aaKnown RBP16.82■□□□□ 0.28
NCKIPSD-209ENST00000470006 CBLN4Q9NTU7 201 aa16.82■□□□□ 0.28
NCKIPSD-209ENST00000470006 DMGDHQ9UI17 866 aaKnown RBP16.82■□□□□ 0.28
NCKIPSD-209ENST00000470006 MCM8Q9UJA3 840 aa16.82■□□□□ 0.28
NCKIPSD-209ENST00000470006 IGLV3-32A0A0A0MS00 114 aa16.81■□□□□ 0.28
NCKIPSD-209ENST00000470006 EIF3HO15372 352 aaKnown RBP eCLIP16.81■□□□□ 0.28
NCKIPSD-209ENST00000470006 PCDH7O60245 1069 aa16.81■□□□□ 0.28
NCKIPSD-209ENST00000470006 SMIM24O75264 130 aa16.81■□□□□ 0.28
NCKIPSD-209ENST00000470006 JUNP05412 331 aaKnown RBP16.81■□□□□ 0.28
NCKIPSD-209ENST00000470006 TCP1P17987 556 aaKnown RBP16.81■□□□□ 0.28
NCKIPSD-209ENST00000470006 TTKP33981 857 aa16.81■□□□□ 0.28
NCKIPSD-209ENST00000470006 NCBP2P52298 156 aaKnown RBP eCLIP16.81■□□□□ 0.28
NCKIPSD-209ENST00000470006 PRR5P85299 388 aa16.81■□□□□ 0.28
NCKIPSD-209ENST00000470006 GGTLC2Q14390 218 aa16.81■□□□□ 0.28
NCKIPSD-209ENST00000470006 GRAMD1BQ3KR37 738 aa16.81■□□□□ 0.28
NCKIPSD-209ENST00000470006 GGTA1PQ4G0N0 100 aa16.81■□□□□ 0.28
NCKIPSD-209ENST00000470006 APOOLQ6UXV4 268 aa16.81■□□□□ 0.28
NCKIPSD-209ENST00000470006 C12orf54Q6X4T0 127 aa16.81■□□□□ 0.28
NCKIPSD-209ENST00000470006 RPS27LQ71UM5 84 aaKnown RBP16.81■□□□□ 0.28
NCKIPSD-209ENST00000470006 LILRA2Q8N149 483 aa16.81■□□□□ 0.28
NCKIPSD-209ENST00000470006 GATSQ8NAP1 163 aa16.81■□□□□ 0.28
NCKIPSD-209ENST00000470006 FBF1Q8TES7 1133 aa16.81■□□□□ 0.28
NCKIPSD-209ENST00000470006 PROX1Q92786 737 aa16.81■□□□□ 0.28
NCKIPSD-209ENST00000470006 ZBTB8AQ96BR9 441 aa16.81■□□□□ 0.28
NCKIPSD-209ENST00000470006 KLHL15Q96M94 604 aa16.81■□□□□ 0.28
NCKIPSD-209ENST00000470006 C3orf14Q9HBI5 128 aa16.81■□□□□ 0.28
NCKIPSD-209ENST00000470006 KLHL13Q9P2N7 655 aa16.81■□□□□ 0.28
NCKIPSD-209ENST00000470006 PLCE1Q9P212 2302 aa16.81■□□□□ 0.28
NCKIPSD-209ENST00000470006 A0A1W2PRB8 838 aa16.8■□□□□ 0.28
NCKIPSD-209ENST00000470006 SLC35F4A4IF30 521 aa16.8■□□□□ 0.28
NCKIPSD-209ENST00000470006 PRKD3O94806 890 aa16.8■□□□□ 0.28
NCKIPSD-209ENST00000470006 KCNH1O95259 989 aa16.8■□□□□ 0.28
NCKIPSD-209ENST00000470006 OTCP00480 354 aa16.8■□□□□ 0.28
NCKIPSD-209ENST00000470006 TSPAN8P19075 237 aa16.8■□□□□ 0.28
NCKIPSD-209ENST00000470006 TYK2P29597 1187 aa16.8■□□□□ 0.28
NCKIPSD-209ENST00000470006 STX2P32856 288 aa16.8■□□□□ 0.28
NCKIPSD-209ENST00000470006 GABRA3P34903 492 aa16.8■□□□□ 0.28
NCKIPSD-209ENST00000470006 FABP6P51161 128 aa16.8■□□□□ 0.28
NCKIPSD-209ENST00000470006 MRPS25P82663 173 aaKnown RBP16.8■□□□□ 0.28
NCKIPSD-209ENST00000470006 UAP1Q16222 522 aaPredicted RBP16.8■□□□□ 0.28
NCKIPSD-209ENST00000470006 SLC22A25Q6T423 547 aa16.8■□□□□ 0.28
NCKIPSD-209ENST00000470006 MUC15Q8N387 334 aa16.8■□□□□ 0.28
NCKIPSD-209ENST00000470006 CDC26Q8NHZ8 85 aa16.8■□□□□ 0.28
NCKIPSD-209ENST00000470006 RNF128Q8TEB7 428 aa16.8■□□□□ 0.28
NCKIPSD-209ENST00000470006 C10orf105Q8TEF2 133 aa16.8■□□□□ 0.28
NCKIPSD-209ENST00000470006 C3orf49Q96BT1 292 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms