RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 SEL1L2Q5TEA6 688 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 RAET1LQ5VY80 246 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 STEAP3Q658P3 488 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 NPSR1Q6W5P4 371 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 CNGA4Q8IV77 575 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 LAS2Q8IYD9 372 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 GABRG1Q8N1C3 465 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 METTL25Q8N6Q8 603 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 CEP112Q8N8E3 955 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 FADS6Q8N9I5 356 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 OR7G3Q8NG95 312 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 OR6K3Q8NGY3 331 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 PHOSPHO1Q8TCT1 267 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 CALML6Q8TD86 181 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 EFHD2Q96C19 240 aaPredicted RBP4.66□□□□□ -1.66
PTPN4-209ENST00000469511 PTCD3Q96EY7 689 aaKnown RBP4.66□□□□□ -1.66
PTPN4-209ENST00000469511 FOXN4Q96NZ1 517 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 TACO1Q9BSH4 297 aaKnown RBP4.66□□□□□ -1.66
PTPN4-209ENST00000469511 DESI2Q9BSY9 194 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 FAM167BQ9BTA0 163 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 ROGDIQ9GZN7 287 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 BARX1Q9HBU1 254 aaPredicted RBP4.66□□□□□ -1.66
PTPN4-209ENST00000469511 SMURF1Q9HCE7 757 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 MAT2BQ9NZL9 334 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 ASIC3Q9UHC3 531 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 BCAP29Q9UHQ4 241 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 ZNF639Q9UID6 485 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 PTBP2Q9UKA9 531 aaKnown RBP4.66□□□□□ -1.66
PTPN4-209ENST00000469511 PLLPQ9Y342 182 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 MRPS18CQ9Y3D5 142 aaKnown RBP4.66□□□□□ -1.66
PTPN4-209ENST00000469511 ZNF175Q9Y473 711 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 PCDHGB1Q9Y5G3 927 aa4.66□□□□□ -1.66
PTPN4-209ENST00000469511 A0A0J9YW62 118 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 SCO2A0A1W2PP80 73 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 A0A1W2PR80 420 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 MAGEB16A2A368 324 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 AP3B1O00203 1094 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 ABCD4O14678 606 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 CXCL13O43927 109 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 CCNT2O60583 730 aaKnown RBP4.65□□□□□ -1.67
PTPN4-209ENST00000469511 STK16O75716 305 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 WISP3O95389 354 aaPredicted RBP4.65□□□□□ -1.67
PTPN4-209ENST00000469511 SLU7O95391 586 aaKnown RBP4.65□□□□□ -1.67
PTPN4-209ENST00000469511 ADAP00813 363 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 DBHP09172 617 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 TPM1P09493 284 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 CT45A8P0DMV1 189 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 CT45A9P0DMV2 189 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 NR2F6P10588 404 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 MLNP12872 115 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 GSTM2P28161 218 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 SHC1P29353 583 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 AGTR1P30556 359 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 GGT5P36269 586 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 FEN1P39748 380 aaKnown RBP4.65□□□□□ -1.67
PTPN4-209ENST00000469511 COMPP49747 757 aaPredicted RBP4.65□□□□□ -1.67
PTPN4-209ENST00000469511 GZMKP49863 264 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 CDH11P55287 796 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 CTBP2P56545 445 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 DSCR4P56555 118 aaPredicted RBP4.65□□□□□ -1.67
PTPN4-209ENST00000469511 RPP38P78345 283 aaKnown RBP4.65□□□□□ -1.67
PTPN4-209ENST00000469511 IRF8Q02556 426 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 TGM3Q08188 693 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 STX5Q13190 355 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 BIKQ13323 160 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 SNTA1Q13424 505 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 E2F2Q14209 437 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 RAB35Q15286 201 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 NRF1Q16656 503 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 TMEM44Q2T9K0 475 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 MIDNQ504T8 468 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 CT45A2Q5DJT8 189 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 PRR31Q5SQ13 230 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 DRICH1Q6PGQ1 229 aaPredicted RBP4.65□□□□□ -1.67
PTPN4-209ENST00000469511 SCIMPQ6UWF3 145 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 DEF8Q6ZN54 512 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 GALNT10Q86SR1 603 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 CNTN4Q8IWV2 1026 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 LMNTD2Q8IXW0 634 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 CCDC170Q8IYT3 715 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 ZCCHC7Q8N3Z6 543 aaKnown RBP4.65□□□□□ -1.67
PTPN4-209ENST00000469511 NAT8LQ8N9F0 302 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 C17orf47Q8NEP4 570 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 OR52R1Q8NGF1 315 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 OR10D3Q8NH80 312 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 HUS1BQ8NHY5 278 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 PROX1Q92786 737 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 TAF15Q92804 592 aaKnown RBP eCLIP4.65□□□□□ -1.67
PTPN4-209ENST00000469511 EXT2Q93063 718 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 RGMAQ96B86 450 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 SLC35A4Q96G79 324 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 KIRREL1Q96J84 757 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 ADGRG7Q96K78 797 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 COL21A1Q96P44 957 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 FRMD8P1Q9BZ68 369 aaPredicted RBP4.65□□□□□ -1.67
PTPN4-209ENST00000469511 PRRG4Q9BZD6 226 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 PITHD1Q9GZP4 211 aaPredicted RBP4.65□□□□□ -1.67
PTPN4-209ENST00000469511 IFT22Q9H7X7 185 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 CAB39LQ9H9S4 337 aa4.65□□□□□ -1.67
PTPN4-209ENST00000469511 SMYD2Q9NRG4 433 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms