RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 ZSCAN5BA6NJL1 495 aa3.84□□□□□ -1.79
GAPVD1-211ENST00000467707 OR6C65A6NJZ3 312 aa3.84□□□□□ -1.79
GAPVD1-211ENST00000467707 FAM74A7A6NL05 159 aa3.84□□□□□ -1.79
GAPVD1-211ENST00000467707 RHOBTB1O94844 696 aa3.84□□□□□ -1.79
GAPVD1-211ENST00000467707 UFL1O94874 794 aa3.84□□□□□ -1.79
GAPVD1-211ENST00000467707 MBD3O95983 291 aa3.84□□□□□ -1.79
GAPVD1-211ENST00000467707 UMPSP11172 480 aa3.84□□□□□ -1.79
GAPVD1-211ENST00000467707 DRD5P21918 477 aa3.84□□□□□ -1.79
GAPVD1-211ENST00000467707 IDSP22304 550 aa3.84□□□□□ -1.79
GAPVD1-211ENST00000467707 HNRNPA2B1P22626 353 aaKnown RBP3.84□□□□□ -1.79
GAPVD1-211ENST00000467707 IGHV1-2P23083 117 aa3.84□□□□□ -1.79
GAPVD1-211ENST00000467707 PSMA5P28066 241 aa3.84□□□□□ -1.79
GAPVD1-211ENST00000467707 NOVA1P51513 510 aaKnown RBP3.84□□□□□ -1.79
GAPVD1-211ENST00000467707 DSCR10P59022 87 aa3.84□□□□□ -1.79
GAPVD1-211ENST00000467707 RPL8P62917 257 aaKnown RBP3.84□□□□□ -1.79
GAPVD1-211ENST00000467707 PEX6Q13608 980 aa3.84□□□□□ -1.79
GAPVD1-211ENST00000467707 SERTAD2Q14140 314 aa3.84□□□□□ -1.79
GAPVD1-211ENST00000467707 MESDQ14696 234 aa3.84□□□□□ -1.79
GAPVD1-211ENST00000467707 TGIF1Q15583 401 aa3.84□□□□□ -1.79
GAPVD1-211ENST00000467707 PDK4Q16654 411 aa3.84□□□□□ -1.79
GAPVD1-211ENST00000467707 GLYR1Q49A26 553 aaPredicted RBP3.84□□□□□ -1.79
GAPVD1-211ENST00000467707 FAM74A3Q4VXF1 159 aa3.84□□□□□ -1.79
GAPVD1-211ENST00000467707 UTF1Q5T230 341 aa3.84□□□□□ -1.79
GAPVD1-211ENST00000467707 MARC1Q5VT66 337 aa3.84□□□□□ -1.79
GAPVD1-211ENST00000467707 SLC22A10Q63ZE4 541 aa3.84□□□□□ -1.79
GAPVD1-211ENST00000467707 ZNF774Q6NX45 483 aa3.84□□□□□ -1.79
GAPVD1-211ENST00000467707 GRAMD2AQ8IUY3 354 aa3.84□□□□□ -1.79
GAPVD1-211ENST00000467707 MCOLN2Q8IZK6 566 aa3.84□□□□□ -1.79
GAPVD1-211ENST00000467707 SPEM1Q8N4L4 309 aa3.84□□□□□ -1.79
GAPVD1-211ENST00000467707 KLHL30-AS1Q8NEE0 82 aa3.84□□□□□ -1.79
GAPVD1-211ENST00000467707 CCDC26Q8TAB7 109 aa3.84□□□□□ -1.79
GAPVD1-211ENST00000467707 TYMSOSQ8TAI1 123 aa3.84□□□□□ -1.79
GAPVD1-211ENST00000467707 AENQ8WTP8 325 aaKnown RBP3.84□□□□□ -1.79
GAPVD1-211ENST00000467707 RLN3Q8WXF3 142 aa3.84□□□□□ -1.79
GAPVD1-211ENST00000467707 TRIM44Q96DX7 344 aaPredicted RBP3.84□□□□□ -1.79
GAPVD1-211ENST00000467707 SENP8Q96LD8 212 aa3.84□□□□□ -1.79
GAPVD1-211ENST00000467707 OMDQ99983 421 aa3.84□□□□□ -1.79
GAPVD1-211ENST00000467707 RMND5AQ9H871 391 aa3.84□□□□□ -1.79
GAPVD1-211ENST00000467707 CALHM2Q9HA72 323 aa3.84□□□□□ -1.79
GAPVD1-211ENST00000467707 PNO1Q9NRX1 252 aaKnown RBP3.84□□□□□ -1.79
GAPVD1-211ENST00000467707 AATFQ9NY61 560 aaKnown RBP eCLIP3.84□□□□□ -1.79
GAPVD1-211ENST00000467707 SLC2A6Q9UGQ3 507 aa3.84□□□□□ -1.79
GAPVD1-211ENST00000467707 WDR45Q9Y484 360 aa3.84□□□□□ -1.79
GAPVD1-211ENST00000467707 ESYT2A0FGR8 921 aa3.83□□□□□ -1.8
GAPVD1-211ENST00000467707 B4DXG7 233 aa3.83□□□□□ -1.8
GAPVD1-211ENST00000467707 NUDT21O43809 227 aaKnown RBP3.83□□□□□ -1.8
GAPVD1-211ENST00000467707 CABYRO75952 493 aa3.83□□□□□ -1.8
GAPVD1-211ENST00000467707 ADCY5O95622 1261 aa3.83□□□□□ -1.8
GAPVD1-211ENST00000467707 THY1P04216 161 aa3.83□□□□□ -1.8
GAPVD1-211ENST00000467707 GCFC2P16383 781 aaKnown RBP3.83□□□□□ -1.8
GAPVD1-211ENST00000467707 NT5EP21589 574 aa3.83□□□□□ -1.8
GAPVD1-211ENST00000467707 CHI3L1P36222 383 aaPredicted RBP3.83□□□□□ -1.8
GAPVD1-211ENST00000467707 PRPHP41219 470 aa3.83□□□□□ -1.8
GAPVD1-211ENST00000467707 EFNA3P52797 238 aa3.83□□□□□ -1.8
GAPVD1-211ENST00000467707 RPL32P62910 135 aaKnown RBP3.83□□□□□ -1.8
GAPVD1-211ENST00000467707 CXCL6P80162 114 aa3.83□□□□□ -1.8
GAPVD1-211ENST00000467707 ZNF154Q13106 437 aa3.83□□□□□ -1.8
GAPVD1-211ENST00000467707 SNTB2Q13425 540 aaKnown RBP3.83□□□□□ -1.8
GAPVD1-211ENST00000467707 ASAH1Q13510 395 aa3.83□□□□□ -1.8
GAPVD1-211ENST00000467707 KCNJ11Q14654 390 aa3.83□□□□□ -1.8
GAPVD1-211ENST00000467707 MAPK6Q16659 721 aa3.83□□□□□ -1.8
GAPVD1-211ENST00000467707 ZNF57Q68EA5 555 aaPredicted RBP3.83□□□□□ -1.8
GAPVD1-211ENST00000467707 FAHD2BQ6P2I3 314 aaPredicted RBP3.83□□□□□ -1.8
GAPVD1-211ENST00000467707 BLOC1S2Q6QNY1 142 aa3.83□□□□□ -1.8
GAPVD1-211ENST00000467707 PAMR1Q6UXH9 720 aa3.83□□□□□ -1.8
GAPVD1-211ENST00000467707 VITQ6UXI7 678 aa3.83□□□□□ -1.8
GAPVD1-211ENST00000467707 CYS1Q717R9 158 aa3.83□□□□□ -1.8
GAPVD1-211ENST00000467707 APTXQ7Z2E3 356 aaKnown RBP3.83□□□□□ -1.8
GAPVD1-211ENST00000467707 SERPINA9Q86WD7 417 aa3.83□□□□□ -1.8
GAPVD1-211ENST00000467707 NAXDQ8IW45 347 aa3.83□□□□□ -1.8
GAPVD1-211ENST00000467707 ZNF540Q8NDQ6 660 aa3.83□□□□□ -1.8
GAPVD1-211ENST00000467707 OR9A4Q8NGU2 314 aa3.83□□□□□ -1.8
GAPVD1-211ENST00000467707 ADAMTS16Q8TE57 1224 aa3.83□□□□□ -1.8
GAPVD1-211ENST00000467707 C18orf25Q96B23 403 aaPredicted RBP3.83□□□□□ -1.8
GAPVD1-211ENST00000467707 FAHD2AQ96GK7 314 aa3.83□□□□□ -1.8
GAPVD1-211ENST00000467707 TXN2Q99757 166 aa3.83□□□□□ -1.8
GAPVD1-211ENST00000467707 PAXXQ9BUH6 204 aa3.83□□□□□ -1.8
GAPVD1-211ENST00000467707 ALG12Q9BV10 488 aa3.83□□□□□ -1.8
GAPVD1-211ENST00000467707 POLR1EQ9GZS1 481 aaKnown RBP3.83□□□□□ -1.8
GAPVD1-211ENST00000467707 RAB33BQ9H082 229 aa3.83□□□□□ -1.8
GAPVD1-211ENST00000467707 PPDPFQ9H3Y8 114 aa3.83□□□□□ -1.8
GAPVD1-211ENST00000467707 ZNF107Q9UII5 783 aaPredicted RBP3.83□□□□□ -1.8
GAPVD1-211ENST00000467707 SNX6Q9UNH7 406 aa3.83□□□□□ -1.8
GAPVD1-211ENST00000467707 L3MBTL1Q9Y468 752 aa3.83□□□□□ -1.8
GAPVD1-211ENST00000467707 MBLAC1A4D2B0 266 aaPredicted RBP3.82□□□□□ -1.8
GAPVD1-211ENST00000467707 NPIPA7E9PJI5 369 aa3.82□□□□□ -1.8
GAPVD1-211ENST00000467707 E9PLD3 99 aa3.82□□□□□ -1.8
GAPVD1-211ENST00000467707 STX7O15400 261 aaKnown RBP3.82□□□□□ -1.8
GAPVD1-211ENST00000467707 MAGEB3O15480 346 aa3.82□□□□□ -1.8
GAPVD1-211ENST00000467707 ZSCAN12O43309 604 aa3.82□□□□□ -1.8
GAPVD1-211ENST00000467707 TPST2O60704 377 aa3.82□□□□□ -1.8
GAPVD1-211ENST00000467707 BCAS1O75363 584 aaPredicted RBP3.82□□□□□ -1.8
GAPVD1-211ENST00000467707 IGF1P05019 195 aa3.82□□□□□ -1.8
GAPVD1-211ENST00000467707 NPIPA8P0DM63 369 aa3.82□□□□□ -1.8
GAPVD1-211ENST00000467707 PGCP20142 388 aa3.82□□□□□ -1.8
GAPVD1-211ENST00000467707 TPSB2P20231 275 aa3.82□□□□□ -1.8
GAPVD1-211ENST00000467707 MAGEA5P43359 124 aa3.82□□□□□ -1.8
GAPVD1-211ENST00000467707 HSD17B7P56937 341 aa3.82□□□□□ -1.8
GAPVD1-211ENST00000467707 VLDLRP98155 873 aa3.82□□□□□ -1.8
GAPVD1-211ENST00000467707 DPYSL3Q14195 570 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms