RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 NFKBIZQ9BYH8 718 aa2.71□□□□□ -1.98
SMC4-207ENST00000467263 GLIPR2Q9H4G4 154 aa2.71□□□□□ -1.98
SMC4-207ENST00000467263 RPAP3Q9H6T3 665 aaPredicted RBP2.71□□□□□ -1.98
SMC4-207ENST00000467263 CAB39LQ9H9S4 337 aa2.71□□□□□ -1.98
SMC4-207ENST00000467263 GPN2Q9H9Y4 310 aaPredicted RBP2.71□□□□□ -1.98
SMC4-207ENST00000467263 ONECUT1Q9UBC0 465 aa2.71□□□□□ -1.98
SMC4-207ENST00000467263 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.71□□□□□ -1.98
SMC4-207ENST00000467263 CDC42BPBQ9Y5S2 1711 aa2.71□□□□□ -1.98
SMC4-207ENST00000467263 TUBAL3A6NHL2 446 aa2.7□□□□□ -1.98
SMC4-207ENST00000467263 LGALS8O00214 317 aa2.7□□□□□ -1.98
SMC4-207ENST00000467263 TRIM3O75382 744 aaPredicted RBP2.7□□□□□ -1.98
SMC4-207ENST00000467263 HPNP05981 417 aa2.7□□□□□ -1.98
SMC4-207ENST00000467263 XRCC1P18887 633 aaPredicted RBP2.7□□□□□ -1.98
SMC4-207ENST00000467263 GABRR1P24046 479 aa2.7□□□□□ -1.98
SMC4-207ENST00000467263 GNPDA1P46926 289 aa2.7□□□□□ -1.98
SMC4-207ENST00000467263 SLC26A5P58743 744 aa2.7□□□□□ -1.98
SMC4-207ENST00000467263 MRPS11P82912 194 aaKnown RBP2.7□□□□□ -1.98
SMC4-207ENST00000467263 PDIA5Q14554 519 aa2.7□□□□□ -1.98
SMC4-207ENST00000467263 LDLRAP1Q5SW96 308 aa2.7□□□□□ -1.98
SMC4-207ENST00000467263 METTL11BQ5VVY1 283 aa2.7□□□□□ -1.98
SMC4-207ENST00000467263 KHDRBS2Q5VWX1 349 aaKnown RBP2.7□□□□□ -1.98
SMC4-207ENST00000467263 VPS36Q86VN1 386 aa2.7□□□□□ -1.98
SMC4-207ENST00000467263 SERPINA9Q86WD7 417 aa2.7□□□□□ -1.98
SMC4-207ENST00000467263 ZNF100Q8IYN0 542 aa2.7□□□□□ -1.98
SMC4-207ENST00000467263 ENTHD1Q8IYW4 607 aa2.7□□□□□ -1.98
SMC4-207ENST00000467263 ALLCQ8N6M5 410 aa2.7□□□□□ -1.98
SMC4-207ENST00000467263 ZBTB44Q8NCP5 570 aa2.7□□□□□ -1.98
SMC4-207ENST00000467263 DQX1Q8TE96 717 aaKnown RBP2.7□□□□□ -1.98
SMC4-207ENST00000467263 FCGR1BQ92637 280 aa2.7□□□□□ -1.98
SMC4-207ENST00000467263 NCLNQ969V3 563 aa2.7□□□□□ -1.98
SMC4-207ENST00000467263 SMIM14Q96QK8 99 aa2.7□□□□□ -1.98
SMC4-207ENST00000467263 COMMD4Q9H0A8 199 aa2.7□□□□□ -1.98
SMC4-207ENST00000467263 ATG10Q9H0Y0 220 aa2.7□□□□□ -1.98
SMC4-207ENST00000467263 FANCFQ9NPI8 374 aa2.7□□□□□ -1.98
SMC4-207ENST00000467263 ANO10Q9NW15 660 aa2.7□□□□□ -1.98
SMC4-207ENST00000467263 MARCH5Q9NX47 278 aa2.7□□□□□ -1.98
SMC4-207ENST00000467263 ANKMY1Q9P2S6 941 aa2.7□□□□□ -1.98
SMC4-207ENST00000467263 IL19Q9UHD0 177 aa2.7□□□□□ -1.98
SMC4-207ENST00000467263 SAMD4AQ9UPU9 718 aaKnown RBP2.7□□□□□ -1.98
SMC4-207ENST00000467263 GMPPBQ9Y5P6 360 aa2.7□□□□□ -1.98
SMC4-207ENST00000467263 NACAE9PAV3 2078 aa2.7□□□□□ -1.98
SMC4-207ENST00000467263 SMIM28A0A1B0GU29 152 aa2.69□□□□□ -1.98
SMC4-207ENST00000467263 ABCD4O14678 606 aa2.69□□□□□ -1.98
SMC4-207ENST00000467263 ASNSP08243 561 aa2.69□□□□□ -1.98
SMC4-207ENST00000467263 ZNF853P0CG23 659 aa2.69□□□□□ -1.98
SMC4-207ENST00000467263 CCDC192P0DO97 292 aa2.69□□□□□ -1.98
SMC4-207ENST00000467263 IGLL1P15814 213 aa2.69□□□□□ -1.98
SMC4-207ENST00000467263 MECOMQ03112 1051 aa2.69□□□□□ -1.98
SMC4-207ENST00000467263 GABPB1Q06547 395 aaPredicted RBP2.69□□□□□ -1.98
SMC4-207ENST00000467263 EGFEM1PQ0D2K5 195 aa2.69□□□□□ -1.98
SMC4-207ENST00000467263 WASHC5Q12768 1159 aa2.69□□□□□ -1.98
SMC4-207ENST00000467263 EXOSC2Q13868 293 aaKnown RBP2.69□□□□□ -1.98
SMC4-207ENST00000467263 PDK1Q15118 436 aa2.69□□□□□ -1.98
SMC4-207ENST00000467263 AANATQ16613 207 aa2.69□□□□□ -1.98
SMC4-207ENST00000467263 CDKN3Q16667 212 aa2.69□□□□□ -1.98
SMC4-207ENST00000467263 LRRC36Q1X8D7 754 aa2.69□□□□□ -1.98
SMC4-207ENST00000467263 ZNF630Q2M218 657 aaPredicted RBP2.69□□□□□ -1.98
SMC4-207ENST00000467263 SLC10A5Q5PT55 438 aa2.69□□□□□ -1.98
SMC4-207ENST00000467263 OR8G2PQ6IF36 304 aa2.69□□□□□ -1.98
SMC4-207ENST00000467263 SCYL2Q6P3W7 929 aa2.69□□□□□ -1.98
SMC4-207ENST00000467263 PPP1R27Q86WC6 154 aa2.69□□□□□ -1.98
SMC4-207ENST00000467263 DCUN1D4Q92564 292 aa2.69□□□□□ -1.98
SMC4-207ENST00000467263 FAM104AQ969W3 186 aa2.69□□□□□ -1.98
SMC4-207ENST00000467263 TMEM186Q96B77 213 aa2.69□□□□□ -1.98
SMC4-207ENST00000467263 UPRTQ96BW1 309 aa2.69□□□□□ -1.98
SMC4-207ENST00000467263 EBF4Q9BQW3 602 aa2.69□□□□□ -1.98
SMC4-207ENST00000467263 POLR3FQ9H1D9 316 aaPredicted RBP2.69□□□□□ -1.98
SMC4-207ENST00000467263 SLC25A51Q9H1U9 297 aa2.69□□□□□ -1.98
SMC4-207ENST00000467263 COG4Q9H9E3 785 aa2.69□□□□□ -1.98
SMC4-207ENST00000467263 NANOGQ9H9S0 305 aa2.69□□□□□ -1.98
SMC4-207ENST00000467263 GALPQ9UBC7 116 aa2.69□□□□□ -1.98
SMC4-207ENST00000467263 EIF3LQ9Y262 564 aaKnown RBP2.69□□□□□ -1.98
SMC4-207ENST00000467263 RNF222A6NCQ9 220 aa2.68□□□□□ -1.98
SMC4-207ENST00000467263 TRIM64A6NGJ6 449 aa2.68□□□□□ -1.98
SMC4-207ENST00000467263 TRIM64BA6NI03 449 aa2.68□□□□□ -1.98
SMC4-207ENST00000467263 WASHC1A8K0Z3 465 aa2.68□□□□□ -1.98
SMC4-207ENST00000467263 TMEM110-MUSTN1A8MSY1 372 aa2.68□□□□□ -1.98
SMC4-207ENST00000467263 MT-ATP6P00846 226 aa2.68□□□□□ -1.98
SMC4-207ENST00000467263 IGKV3-11P04433 115 aa2.68□□□□□ -1.98
SMC4-207ENST00000467263 ALPPP05187 535 aa2.68□□□□□ -1.98
SMC4-207ENST00000467263 ALPPL2P10696 532 aa2.68□□□□□ -1.98
SMC4-207ENST00000467263 ANXA3P12429 323 aa2.68□□□□□ -1.98
SMC4-207ENST00000467263 CCNE1P24864 410 aa2.68□□□□□ -1.98
SMC4-207ENST00000467263 GCKP35557 465 aa2.68□□□□□ -1.98
SMC4-207ENST00000467263 TLE4Q04727 773 aa2.68□□□□□ -1.98
SMC4-207ENST00000467263 ST3GAL3Q11203 375 aa2.68□□□□□ -1.98
SMC4-207ENST00000467263 DCST2Q5T1A1 773 aa2.68□□□□□ -1.98
SMC4-207ENST00000467263 PVRIGQ6DKI7 326 aa2.68□□□□□ -1.98
SMC4-207ENST00000467263 TMEM110Q86TL2 294 aa2.68□□□□□ -1.98
SMC4-207ENST00000467263 RNF148Q8N7C7 305 aa2.68□□□□□ -1.98
SMC4-207ENST00000467263 Q8N9L7 120 aa2.68□□□□□ -1.98
SMC4-207ENST00000467263 ZSCAN4Q8NAM6 433 aaPredicted RBP2.68□□□□□ -1.98
SMC4-207ENST00000467263 MINDY2Q8NBR6 621 aa2.68□□□□□ -1.98
SMC4-207ENST00000467263 NMNAT2Q9BZQ4 307 aa2.68□□□□□ -1.98
SMC4-207ENST00000467263 MYOZ2Q9NPC6 264 aa2.68□□□□□ -1.98
SMC4-207ENST00000467263 PAK1IP1Q9NWT1 392 aaPredicted RBP2.68□□□□□ -1.98
SMC4-207ENST00000467263 CD274Q9NZQ7 290 aa2.68□□□□□ -1.98
SMC4-207ENST00000467263 SPASTQ9UBP0 616 aa2.68□□□□□ -1.98
SMC4-207ENST00000467263 MAB21L2Q9Y586 359 aa2.68□□□□□ -1.98
SMC4-207ENST00000467263 USP16Q9Y5T5 823 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms