RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 SHC2P98077 582 aa12.12□□□□□ -0.47
PDZRN3-205ENST00000466780 SLC25A35Q3KQZ1 300 aa12.12□□□□□ -0.47
PDZRN3-205ENST00000466780 ARL9Q6T311 187 aa12.12□□□□□ -0.47
PDZRN3-205ENST00000466780 SLC39A5Q6ZMH5 540 aa12.12□□□□□ -0.47
PDZRN3-205ENST00000466780 FBXL6Q8N531 539 aa12.12□□□□□ -0.47
PDZRN3-205ENST00000466780 LINC01555Q8NAE3 123 aa12.12□□□□□ -0.47
PDZRN3-205ENST00000466780 OR2T33Q8NG76 320 aa12.12□□□□□ -0.47
PDZRN3-205ENST00000466780 OR6C4Q8NGE1 309 aa12.12□□□□□ -0.47
PDZRN3-205ENST00000466780 OR5K2Q8NHB8 316 aa12.12□□□□□ -0.47
PDZRN3-205ENST00000466780 SFXN5Q8TD22 340 aa12.12□□□□□ -0.47
PDZRN3-205ENST00000466780 NR4A3Q92570 626 aa12.12□□□□□ -0.47
PDZRN3-205ENST00000466780 ARRDC3Q96B67 414 aa12.12□□□□□ -0.47
PDZRN3-205ENST00000466780 OMA1Q96E52 524 aa12.12□□□□□ -0.47
PDZRN3-205ENST00000466780 HCAR1Q9BXC0 346 aa12.12□□□□□ -0.47
PDZRN3-205ENST00000466780 UBQLN3Q9H347 655 aa12.12□□□□□ -0.47
PDZRN3-205ENST00000466780 DPAGT1Q9H3H5 408 aa12.12□□□□□ -0.47
PDZRN3-205ENST00000466780 EQTNQ9NQ60 294 aa12.12□□□□□ -0.47
PDZRN3-205ENST00000466780 SLC13A4Q9UKG4 626 aa12.12□□□□□ -0.47
PDZRN3-205ENST00000466780 ENTPD4Q9Y227 616 aa12.12□□□□□ -0.47
PDZRN3-205ENST00000466780 IGKV1-8A0A0C4DH67 115 aa12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 LRIT2A6NDA9 550 aa12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 MPC2O95563 127 aa12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 CD3GP09693 182 aa12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 UBL4AP11441 157 aa12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 GCGRP47871 477 aa12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 ANXA11P50995 505 aaKnown RBP12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 E2F1Q01094 437 aa12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 ARHGAP19Q14CB8 494 aa12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 ARHGEF6Q15052 776 aa12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 TEAD2Q15562 447 aa12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 LGALSLQ3ZCW2 172 aaPredicted RBP12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 RNASE12Q5GAN4 147 aaKnown RBP12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 PRAMEF8Q5VWM4 474 aa12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 PRAMEF7Q5VXH5 474 aa12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 PYHIN1Q6K0P9 492 aa12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 PLEKHM3Q6ZWE6 761 aa12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 MBOAT2Q6ZWT7 520 aa12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 BPHLQ86WA6 291 aaPredicted RBP12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 GJD3Q8N144 294 aa12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 TRMT10AQ8TBZ6 339 aaKnown RBP12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 NACC2Q96BF6 587 aa12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 AHCYL2Q96HN2 611 aaKnown RBP12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 OR2M2Q96R28 347 aa12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 TRMT61BQ9BVS5 477 aaKnown RBP12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 TEX12Q9BXU0 123 aa12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 EVA1BQ9NVM1 165 aa12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 NUP50Q9UKX7 468 aa12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 ATG4BQ9Y4P1 393 aa12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 NUBP2Q9Y5Y2 271 aa12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 HCFC2Q9Y5Z7 792 aa12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 IRAK3Q9Y616 596 aa12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 FCMRO60667 390 aa12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 FKTNO75072 461 aa12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 FZD7O75084 574 aa12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 NDUFV2P19404 249 aa12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 FUT1P19526 365 aa12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 GIFP27352 417 aa12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 EPHA5P54756 1037 aa12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 TGM3Q08188 693 aa12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 CAMK2DQ13557 499 aa12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 COL28A1Q2UY09 1125 aa12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 GPR139Q6DWJ6 353 aa12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 NIPAL3Q6P499 406 aa12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 ZNF765Q7L2R6 523 aa12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 SIAH3Q8IW03 269 aa12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 FAM20CQ8IXL6 584 aa12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 OR8K5Q8NH50 307 aa12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 OR5W2Q8NH69 310 aa12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 HGDQ93099 445 aa12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 YIPF5Q969M3 257 aa12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 SLC41A3Q96GZ6 507 aa12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 MCHR1Q99705 422 aa12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 DPCDQ9BVM2 203 aaPredicted RBP12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 ENKD1Q9H0I2 346 aa12.11□□□□□ -0.47
PDZRN3-205ENST00000466780 I3L521 148 aa12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 MOSPD3O75425 235 aa12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 HMGN1P05114 100 aa12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 SSTR2P30874 369 aa12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 CCR6P51684 374 aa12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 CLCNKAP51800 687 aa12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 RGS8P57771 180 aaPredicted RBP12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 FXYD6P3P58550 94 aa12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 FGFBP1Q14512 234 aa12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 ST3GAL2Q16842 350 aa12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 LILRA6Q6PI73 481 aa12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 BHLHB9Q6PI77 547 aa12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 ADCK2Q7Z695 626 aa12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 AMZ2Q86W34 360 aa12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 OR56A1Q8NGH5 318 aa12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 KISS1RQ969F8 398 aaPredicted RBP12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 FAIM2Q9BWQ8 316 aa12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 UCKL1Q9NWZ5 548 aa12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 PRKAG2Q9UGJ0 569 aa12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 VEGFDO43915 354 aa12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 CLEC3AO75596 197 aa12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 HOXB3P14651 431 aaPredicted RBP12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 POLR2CP19387 275 aaPredicted RBP12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 F8A1P23610 371 aa12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 MC3RP41968 323 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms