RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 PTBP1P26599 531 aaKnown RBP eCLIP4.07□□□□□ -1.767e-11■■■■■ 35.2
PTCD3-205ENST00000464541 PRDX6P30041 224 aa4.07□□□□□ -1.76
PTCD3-205ENST00000464541 ADSSP30520 456 aa4.07□□□□□ -1.76
PTCD3-205ENST00000464541 IFNAR2P48551 515 aa4.07□□□□□ -1.76
PTCD3-205ENST00000464541 SULT1E1P49888 294 aa4.07□□□□□ -1.76
PTCD3-205ENST00000464541 DIO3P55073 304 aa4.07□□□□□ -1.76
PTCD3-205ENST00000464541 YBEYP58557 167 aaPredicted RBP4.07□□□□□ -1.76
PTCD3-205ENST00000464541 RND3P61587 244 aa4.07□□□□□ -1.76
PTCD3-205ENST00000464541 DPYSQ14117 519 aa4.07□□□□□ -1.76
PTCD3-205ENST00000464541 KCNJ11Q14654 390 aa4.07□□□□□ -1.76
PTCD3-205ENST00000464541 UBE2V2Q15819 145 aa4.07□□□□□ -1.76
PTCD3-205ENST00000464541 TEX44Q53QW1 395 aa4.07□□□□□ -1.76
PTCD3-205ENST00000464541 C12orf60Q5U649 245 aa4.07□□□□□ -1.76
PTCD3-205ENST00000464541 SLX4IPQ5VYV7 408 aa4.07□□□□□ -1.76
PTCD3-205ENST00000464541 RUFY3Q7L099 469 aa4.07□□□□□ -1.76
PTCD3-205ENST00000464541 IFNEQ86WN2 208 aa4.07□□□□□ -1.76
PTCD3-205ENST00000464541 CEND1Q8N111 149 aa4.07□□□□□ -1.76
PTCD3-205ENST00000464541 CNNM3Q8NE01 707 aa4.07□□□□□ -1.76
PTCD3-205ENST00000464541 SLC25A38Q96DW6 304 aa4.07□□□□□ -1.76
PTCD3-205ENST00000464541 C16orf74Q96GX8 76 aa4.07□□□□□ -1.76
PTCD3-205ENST00000464541 FAM111AQ96PZ2 611 aa4.07□□□□□ -1.76
PTCD3-205ENST00000464541 TXN2Q99757 166 aa4.07□□□□□ -1.76
PTCD3-205ENST00000464541 Q9H3A6 140 aa4.07□□□□□ -1.76
PTCD3-205ENST00000464541 RWDD1Q9H446 243 aaPredicted RBP4.07□□□□□ -1.76
PTCD3-205ENST00000464541 PNO1Q9NRX1 252 aaKnown RBP4.07□□□□□ -1.76
PTCD3-205ENST00000464541 COX16Q9P0S2 106 aa4.07□□□□□ -1.76
PTCD3-205ENST00000464541 LAMP5Q9UJQ1 280 aa4.07□□□□□ -1.76
PTCD3-205ENST00000464541 SMC3Q9UQE7 1217 aa4.07□□□□□ -1.76
PTCD3-205ENST00000464541 METP08581 1390 aa4.06□□□□□ -1.76
PTCD3-205ENST00000464541 ATP8B3O60423 1300 aa4.06□□□□□ -1.76
PTCD3-205ENST00000464541 FAM25EA8MYX2 175 aa4.06□□□□□ -1.76
PTCD3-205ENST00000464541 E9PLD3 99 aa4.06□□□□□ -1.76
PTCD3-205ENST00000464541 H0YC42 278 aa4.06□□□□□ -1.76
PTCD3-205ENST00000464541 H0YL77 283 aa4.06□□□□□ -1.76
PTCD3-205ENST00000464541 UBXN8O00124 270 aa4.06□□□□□ -1.76
PTCD3-205ENST00000464541 CASQ2O14958 399 aaPredicted RBP4.06□□□□□ -1.76
PTCD3-205ENST00000464541 TRIM3O75382 744 aaPredicted RBP4.06□□□□□ -1.76
PTCD3-205ENST00000464541 KRT6AP02538 564 aa4.06□□□□□ -1.76
PTCD3-205ENST00000464541 KRT6BP04259 564 aa4.06□□□□□ -1.76
PTCD3-205ENST00000464541 CD55P08174 381 aa4.06□□□□□ -1.76
PTCD3-205ENST00000464541 STSP08842 583 aa4.06□□□□□ -1.76
PTCD3-205ENST00000464541 CCDC166P0CW27 439 aa4.06□□□□□ -1.76
PTCD3-205ENST00000464541 ACAA2P42765 397 aaKnown RBP4.06□□□□□ -1.76
PTCD3-205ENST00000464541 HTR5AP47898 357 aa4.06□□□□□ -1.76
PTCD3-205ENST00000464541 KRT6CP48668 564 aa4.06□□□□□ -1.76
PTCD3-205ENST00000464541 PLOD1Q02809 727 aaPredicted RBP4.06□□□□□ -1.76
PTCD3-205ENST00000464541 KYAT1Q16773 422 aa4.06□□□□□ -1.76
PTCD3-205ENST00000464541 OTPQ5XKR4 325 aa4.06□□□□□ -1.76
PTCD3-205ENST00000464541 OR5M10Q6IEU7 315 aa4.06□□□□□ -1.76
PTCD3-205ENST00000464541 TMEM184AQ6ZMB5 413 aa4.06□□□□□ -1.76
PTCD3-205ENST00000464541 TMEM26Q6ZUK4 368 aa4.06□□□□□ -1.76
PTCD3-205ENST00000464541 OTUD6AQ7L8S5 288 aa4.06□□□□□ -1.76
PTCD3-205ENST00000464541 KDM8Q8N371 416 aa4.06□□□□□ -1.76
PTCD3-205ENST00000464541 BPIFB2Q8N4F0 458 aa4.06□□□□□ -1.76
PTCD3-205ENST00000464541 GMCL1P1Q8NEA9 526 aa4.06□□□□□ -1.76
PTCD3-205ENST00000464541 OR52K2Q8NGK3 314 aa4.06□□□□□ -1.76
PTCD3-205ENST00000464541 MCHR2Q969V1 340 aa4.06□□□□□ -1.76
PTCD3-205ENST00000464541 PINX1Q96BK5 328 aaKnown RBP4.06□□□□□ -1.76
PTCD3-205ENST00000464541 C14orf79Q96F83 325 aa4.06□□□□□ -1.76
PTCD3-205ENST00000464541 ELMO2Q96JJ3 720 aa4.06□□□□□ -1.76
PTCD3-205ENST00000464541 IMMP1LQ96LU5 166 aa4.06□□□□□ -1.76
PTCD3-205ENST00000464541 TECTBQ96PL2 329 aa4.06□□□□□ -1.76
PTCD3-205ENST00000464541 FEM1AQ9BSK4 669 aa4.06□□□□□ -1.76
PTCD3-205ENST00000464541 HSD3B7Q9H2F3 369 aa4.06□□□□□ -1.76
PTCD3-205ENST00000464541 PLSCR3Q9NRY6 295 aa4.06□□□□□ -1.76
PTCD3-205ENST00000464541 NINJ2Q9NZG7 142 aa4.06□□□□□ -1.76
PTCD3-205ENST00000464541 P2RX2Q9UBL9 471 aa4.06□□□□□ -1.76
PTCD3-205ENST00000464541 GMPPBQ9Y5P6 360 aa4.06□□□□□ -1.76
PTCD3-205ENST00000464541 WI2-2373I1.2A0A1W2PRP0 233 aa4.05□□□□□ -1.76
PTCD3-205ENST00000464541 B4DXG7 233 aa4.05□□□□□ -1.76
PTCD3-205ENST00000464541 GPR89AB7ZAQ6 455 aa4.05□□□□□ -1.76
PTCD3-205ENST00000464541 AP3B1O00203 1094 aa4.05□□□□□ -1.76
PTCD3-205ENST00000464541 LGALS8O00214 317 aa4.05□□□□□ -1.76
PTCD3-205ENST00000464541 IGLV1-47P01700 117 aa4.05□□□□□ -1.76
PTCD3-205ENST00000464541 GPR89BP0CG08 455 aa4.05□□□□□ -1.76
PTCD3-205ENST00000464541 ZCCHC18P0CG32 403 aa4.05□□□□□ -1.76
PTCD3-205ENST00000464541 CCNA2P20248 432 aa4.05□□□□□ -1.76
PTCD3-205ENST00000464541 RPL4P36578 427 aaKnown RBP4.05□□□□□ -1.76
PTCD3-205ENST00000464541 TRPC1P48995 793 aa4.05□□□□□ -1.76
PTCD3-205ENST00000464541 EFNA3P52797 238 aa4.05□□□□□ -1.76
PTCD3-205ENST00000464541 ATXN3P54252 364 aaPredicted RBP4.05□□□□□ -1.76
PTCD3-205ENST00000464541 FUT7Q11130 342 aa4.05□□□□□ -1.76
PTCD3-205ENST00000464541 OR2B11Q5JQS5 317 aa4.05□□□□□ -1.76
PTCD3-205ENST00000464541 CCDC183Q5T5S1 534 aa4.05□□□□□ -1.76
PTCD3-205ENST00000464541 LPCAT2Q7L5N7 544 aa4.05□□□□□ -1.76
PTCD3-205ENST00000464541 MINDY2Q8NBR6 621 aa4.05□□□□□ -1.76
PTCD3-205ENST00000464541 OR56B1Q8NGI3 324 aa4.05□□□□□ -1.76
PTCD3-205ENST00000464541 KCNK16Q96T55 309 aa4.05□□□□□ -1.76
PTCD3-205ENST00000464541 TBC1D10AQ9BXI6 508 aa4.05□□□□□ -1.76
PTCD3-205ENST00000464541 NCOR1P1Q9H4R4 102 aa4.05□□□□□ -1.76
PTCD3-205ENST00000464541 KAT8Q9H7Z6 458 aaKnown RBP4.05□□□□□ -1.76
PTCD3-205ENST00000464541 SAMD4AQ9UPU9 718 aaKnown RBP4.05□□□□□ -1.76
PTCD3-205ENST00000464541 TDRD6O60522 2096 aaKnown RBP4.05□□□□□ -1.76
PTCD3-205ENST00000464541 RNF222A6NCQ9 220 aa4.04□□□□□ -1.76
PTCD3-205ENST00000464541 DHRS7CA6NNS2 312 aa4.04□□□□□ -1.76
PTCD3-205ENST00000464541 LYPLA1O75608 230 aaPredicted RBP4.04□□□□□ -1.76
PTCD3-205ENST00000464541 KIAA0754O94854 1291 aa4.04□□□□□ -1.76
PTCD3-205ENST00000464541 MT-ATP6P00846 226 aa4.04□□□□□ -1.76
PTCD3-205ENST00000464541 IFNB1P01574 187 aa4.04□□□□□ -1.76
PTCD3-205ENST00000464541 CCNCP24863 283 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms