RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 SMN1Q16637 294 aaKnown RBP4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 DUOXA1Q1HG43 343 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 DEFB133Q30KQ1 61 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 AARDQ4LEZ3 155 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 ATP6AP1LQ52LC2 224 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 RFTN2Q52LD8 501 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 SOWAHCQ53LP3 525 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 PAGE2BQ5JRK9 111 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 ADNP2Q6IQ32 1131 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 OGFOD2Q6N063 350 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 MED27Q6P2C8 311 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 TMEM26Q6ZUK4 368 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 TMPRSS11BQ86T26 416 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 TBC1D26Q86UD7 250 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 RNF175Q8N4F7 328 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 ARL14Q8N4G2 192 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 OR2L3Q8NG85 312 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 OR8K5Q8NH50 307 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 HUS1BQ8NHY5 278 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 FLVCR1-AS1Q8TAF5 88 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 C9orf43Q8TAL5 461 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 WDR20Q8TBZ3 569 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 SELENOMQ8WWX9 145 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 THRSPQ92748 146 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 BCL2L2Q92843 193 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 UBE2E3Q969T4 207 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 SPSB1Q96BD6 273 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 REPS1Q96D71 796 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 SPACA9Q96E40 222 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 MARK4Q96L34 752 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 PPP3R2Q96LZ3 170 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 PRAP1Q96NZ9 151 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 CATSPER2Q96P56 530 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 PRR25Q96S07 402 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 HBEGFQ99075 208 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 MTERF1Q99551 399 aaKnown RBP4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 AIF1LQ9BQI0 150 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 C1QTNF5Q9BXJ0 243 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 ACPTQ9BZG2 426 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 TRIM2Q9C040 744 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 SPNS1Q9H2V7 528 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 RHBGQ9H310 441 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 RIBC2Q9H4K1 309 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 NT5DC2Q9H857 520 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 UCK1Q9HA47 277 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 LRTM1Q9HBL6 345 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 MSL2Q9HCI7 577 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 TMEM184CQ9NVA4 438 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 ATAD3AQ9NVI7 634 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 C1orf109Q9NX04 203 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 VPS29Q9UBQ0 182 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 KCNE5Q9UJ90 142 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 TSC22D4Q9Y3Q8 395 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 SCN2AQ99250 2005 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 MYO15AQ9UKN7 3530 aa4.83□□□□□ -1.64
HMGB1P4-201ENST00000455362 PTPRZ1P23471 2315 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P4-201ENST00000455362 LOC100653049A0A140TA62 436 aa4.82□□□□□ -1.64
HMGB1P4-201ENST00000455362 A0A1B0GTQ1 180 aa4.82□□□□□ -1.64
HMGB1P4-201ENST00000455362 MYOCOSA0A1B0GUC4 107 aa4.82□□□□□ -1.64
HMGB1P4-201ENST00000455362 PIPSLA2A3N6 862 aa4.82□□□□□ -1.64
HMGB1P4-201ENST00000455362 C9orf118A6NHY6 69 aa4.82□□□□□ -1.64
HMGB1P4-201ENST00000455362 CGB1A6NKQ9 187 aa4.82□□□□□ -1.64
HMGB1P4-201ENST00000455362 ST8SIA3O43173 380 aa4.82□□□□□ -1.64
HMGB1P4-201ENST00000455362 GMFGO60234 142 aa4.82□□□□□ -1.64
HMGB1P4-201ENST00000455362 LCMT2O60294 686 aaKnown RBP4.82□□□□□ -1.64
HMGB1P4-201ENST00000455362 DFNA5O60443 496 aa4.82□□□□□ -1.64
HMGB1P4-201ENST00000455362 KRT34O76011 436 aa4.82□□□□□ -1.64
HMGB1P4-201ENST00000455362 ETHE1O95571 254 aa4.82□□□□□ -1.64
HMGB1P4-201ENST00000455362 THRAP10827 490 aa4.82□□□□□ -1.64
HMGB1P4-201ENST00000455362 PCNAP12004 261 aa4.82□□□□□ -1.64
HMGB1P4-201ENST00000455362 BCKDHAP12694 445 aa4.82□□□□□ -1.64
HMGB1P4-201ENST00000455362 COX4I1P13073 169 aa4.82□□□□□ -1.64
HMGB1P4-201ENST00000455362 IDO1P14902 403 aa4.82□□□□□ -1.64
HMGB1P4-201ENST00000455362 POLR2CP19387 275 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P4-201ENST00000455362 PIK3R1P27986 724 aa4.82□□□□□ -1.64
HMGB1P4-201ENST00000455362 PRDX6P30041 224 aa4.82□□□□□ -1.64
HMGB1P4-201ENST00000455362 CMPK1P30085 196 aa4.82□□□□□ -1.64
HMGB1P4-201ENST00000455362 GRIA3P42263 894 aa4.82□□□□□ -1.64
HMGB1P4-201ENST00000455362 MRPL19P49406 292 aaKnown RBP4.82□□□□□ -1.64
HMGB1P4-201ENST00000455362 ARRB1P49407 418 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P4-201ENST00000455362 ACADVLP49748 655 aa4.82□□□□□ -1.64
HMGB1P4-201ENST00000455362 MNAT1P51948 309 aa4.82□□□□□ -1.64
HMGB1P4-201ENST00000455362 GTF2A1P52655 376 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P4-201ENST00000455362 GBX2P52951 348 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P4-201ENST00000455362 TRA2BP62995 288 aaKnown RBP4.82□□□□□ -1.64
HMGB1P4-201ENST00000455362 IRX1P78414 480 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P4-201ENST00000455362 REEP5Q00765 189 aa4.82□□□□□ -1.64
HMGB1P4-201ENST00000455362 E2F1Q01094 437 aa4.82□□□□□ -1.64
HMGB1P4-201ENST00000455362 HHEXQ03014 270 aa4.82□□□□□ -1.64
HMGB1P4-201ENST00000455362 GRIK2Q13002 908 aa4.82□□□□□ -1.64
HMGB1P4-201ENST00000455362 RIPK1Q13546 671 aa4.82□□□□□ -1.64
HMGB1P4-201ENST00000455362 DDX39BQ13838 428 aaKnown RBP4.82□□□□□ -1.64
HMGB1P4-201ENST00000455362 SQLEQ14534 574 aa4.82□□□□□ -1.64
HMGB1P4-201ENST00000455362 RBBP5Q15291 538 aaKnown RBP4.82□□□□□ -1.64
HMGB1P4-201ENST00000455362 IMPG1Q17R60 797 aa4.82□□□□□ -1.64
HMGB1P4-201ENST00000455362 SLC5A12Q1EHB4 618 aa4.82□□□□□ -1.64
HMGB1P4-201ENST00000455362 HLA-BQ31612 363 aa4.82□□□□□ -1.64
HMGB1P4-201ENST00000455362 CDONQ4KMG0 1287 aa4.82□□□□□ -1.64
HMGB1P4-201ENST00000455362 C14orf28Q4W4Y0 310 aa4.82□□□□□ -1.64
HMGB1P4-201ENST00000455362 AGKQ53H12 422 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms