RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 WSB2Q9NYS7 404 aaPredicted RBP11.18□□□□□ -0.62
SMPD4-213ENST00000454468 DOCK8Q8NF50 2099 aa11.18□□□□□ -0.62
SMPD4-213ENST00000454468 A0A1W2PQL4 384 aaPredicted RBP11.17□□□□□ -0.62
SMPD4-213ENST00000454468 CDC14CA4D256 554 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 SH3D21A4FU49 640 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 METTL15A6NJ78 407 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 GSTM3P21266 225 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.17□□□□□ -0.62
SMPD4-213ENST00000454468 PRPF38BQ5VTL8 546 aaKnown RBP11.17□□□□□ -0.62
SMPD4-213ENST00000454468 SLX4IPQ5VYV7 408 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 MFSD12Q6NUT3 480 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 TMEM64Q6YI46 380 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 AKAP14Q86UN6 197 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 CELF2-AS1Q8N7Q2 184 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 OR52R1Q8NGF1 315 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 OR13C2Q8NGS9 318 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 OR4C6Q8NH72 309 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 FANK1Q8TC84 345 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 ELSPBP1Q96BH3 223 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 MS4A4EQ96PG1 132 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 PINK1Q9BXM7 581 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 OR8D2Q9GZM6 311 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 LMAN2LQ9H0V9 348 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 AKIP1Q9NQ31 210 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 ZSCAN32Q9NX65 697 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 FBXL21Q9UKT6 434 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 LIPT1Q9Y234 373 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 A0A1B0GVT2 93 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 BLOC1S5-TXNDC5H3BN57 136 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 SSX4O60224 188 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 STX11O75558 287 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 MYF5P13349 255 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 BNC1Q01954 994 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 CRYZQ08257 329 aaKnown RBP11.17□□□□□ -0.62
SMPD4-213ENST00000454468 DEFB133Q30KQ1 61 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 ASB18Q6ZVZ8 466 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 KRT74Q7RTS7 529 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 GDF7Q7Z4P5 450 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 PRR22Q8IZ63 422 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 TSTD1Q8NFU3 115 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 OR4N2Q8NGD1 307 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 OR5M3Q8NGP4 307 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 ENKURQ8TC29 256 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 OPALINQ96PE5 141 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 COQ7Q99807 217 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 RSPO3Q9BXY4 272 aaPredicted RBP11.17□□□□□ -0.62
SMPD4-213ENST00000454468 GSDMCQ9BYG8 508 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 MTHFD2LQ9H903 347 aaPredicted RBP11.17□□□□□ -0.62
SMPD4-213ENST00000454468 QPCTLQ9NXS2 382 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 ADAM29Q9UKF5 820 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 ZNF443Q9Y2A4 671 aaPredicted RBP11.17□□□□□ -0.62
SMPD4-213ENST00000454468 WBP11Q9Y2W2 641 aaKnown RBP11.17□□□□□ -0.62
SMPD4-213ENST00000454468 PCDHGB1Q9Y5G3 927 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 MDC1Q14676 2089 aaKnown RBP11.17□□□□□ -0.62
SMPD4-213ENST00000454468 FAM86C2PA6NEL3 165 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 C12orf71A8MTZ7 269 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 DSCR3O14972 297 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 UPK1BO75841 260 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 FCER2P06734 321 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 HBQ1P09105 142 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 INHBBP09529 407 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 ST6GAL1P15907 406 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 POU6F2P78424 691 aaPredicted RBP11.17□□□□□ -0.62
SMPD4-213ENST00000454468 TNFRSF17Q02223 184 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 SSX1Q16384 188 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 ZNF658BQ4V348 819 aaPredicted RBP11.17□□□□□ -0.62
SMPD4-213ENST00000454468 CCDC157Q569K6 752 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 DCST2Q5T1A1 773 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 IL20RBQ6UXL0 311 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 CXXC5Q7LFL8 322 aaKnown RBP11.17□□□□□ -0.62
SMPD4-213ENST00000454468 OAFQ86UD1 273 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 OR2T33Q8NG76 320 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 OR4K13Q8NH42 304 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 MMP28Q9H239 520 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 TBCCD1Q9NVR7 557 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 SEC14L4Q9UDX3 406 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 DAPP1Q9UN19 280 aa11.17□□□□□ -0.62
SMPD4-213ENST00000454468 A6NL46 340 aa11.16□□□□□ -0.62
SMPD4-213ENST00000454468 GTPBP1O00178 669 aaKnown RBP11.16□□□□□ -0.62
SMPD4-213ENST00000454468 SULT1C4O75897 302 aa11.16□□□□□ -0.62
SMPD4-213ENST00000454468 RECKO95980 971 aa11.16□□□□□ -0.62
SMPD4-213ENST00000454468 ENDOUP21128 410 aaKnown RBP11.16□□□□□ -0.62
SMPD4-213ENST00000454468 MAPK14Q16539 360 aa11.16□□□□□ -0.62
SMPD4-213ENST00000454468 DDI2Q5TDH0 399 aa11.16□□□□□ -0.62
SMPD4-213ENST00000454468 GPR155Q7Z3F1 870 aa11.16□□□□□ -0.62
SMPD4-213ENST00000454468 POLMQ9NP87 494 aaPredicted RBP11.16□□□□□ -0.62
SMPD4-213ENST00000454468 REV1Q9UBZ9 1251 aa11.16□□□□□ -0.62
SMPD4-213ENST00000454468 NCOR1O75376 2440 aa11.16□□□□□ -0.62
SMPD4-213ENST00000454468 RTTNQ86VV8 2226 aa11.16□□□□□ -0.62
SMPD4-213ENST00000454468 UBXN7O94888 489 aa11.16□□□□□ -0.62
SMPD4-213ENST00000454468 PPP1R3DO95685 299 aa11.16□□□□□ -0.62
SMPD4-213ENST00000454468 HCCSP53701 268 aa11.16□□□□□ -0.62
SMPD4-213ENST00000454468 EOGTQ5NDL2 527 aa11.16□□□□□ -0.62
SMPD4-213ENST00000454468 NKAIN2Q5VXU1 208 aa11.16□□□□□ -0.62
SMPD4-213ENST00000454468 OTPQ5XKR4 325 aa11.16□□□□□ -0.62
SMPD4-213ENST00000454468 ATP6V1C2Q8NEY4 427 aa11.16□□□□□ -0.62
SMPD4-213ENST00000454468 OR8D4Q8NGM9 314 aa11.16□□□□□ -0.62
SMPD4-213ENST00000454468 ZDHHC1Q8WTX9 485 aa11.16□□□□□ -0.62
SMPD4-213ENST00000454468 SPRYD4Q8WW59 207 aaPredicted RBP11.16□□□□□ -0.62
SMPD4-213ENST00000454468 RFKQ969G6 155 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms