RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 ART3Q13508 389 aa18.14■□□□□ 0.49
COL9A3-202ENST00000452372 EMC4Q5J8M3 183 aa18.14■□□□□ 0.49
COL9A3-202ENST00000452372 TNFAIP8L2Q6P589 184 aaPredicted RBP18.14■□□□□ 0.49
COL9A3-202ENST00000452372 RNF130Q86XS8 419 aa18.14■□□□□ 0.49
COL9A3-202ENST00000452372 FADS6Q8N9I5 356 aa18.14■□□□□ 0.49
COL9A3-202ENST00000452372 FAM83FQ8NEG4 500 aaPredicted RBP18.14■□□□□ 0.49
COL9A3-202ENST00000452372 ZFP90Q8TF47 636 aa18.14■□□□□ 0.49
COL9A3-202ENST00000452372 XAGE5Q8WWM1 108 aa18.14■□□□□ 0.49
COL9A3-202ENST00000452372 HHATLQ9HCP6 504 aa18.14■□□□□ 0.49
COL9A3-202ENST00000452372 SPRR3Q9UBC9 169 aa18.14■□□□□ 0.49
COL9A3-202ENST00000452372 SH3BGRL2Q9UJC5 107 aa18.14■□□□□ 0.49
COL9A3-202ENST00000452372 TACC2O95359 2948 aa18.13■□□□□ 0.49
COL9A3-202ENST00000452372 IGLV3-32A0A0A0MS00 114 aa18.13■□□□□ 0.49
COL9A3-202ENST00000452372 A0A1W2PQD3 144 aa18.13■□□□□ 0.49
COL9A3-202ENST00000452372 CCL21O00585 134 aa18.13■□□□□ 0.49
COL9A3-202ENST00000452372 NDUFB5O43674 189 aa18.13■□□□□ 0.49
COL9A3-202ENST00000452372 GUSBP08236 651 aa18.13■□□□□ 0.49
COL9A3-202ENST00000452372 HPGDP15428 266 aa18.13■□□□□ 0.49
COL9A3-202ENST00000452372 SRD5A2P31213 254 aa18.13■□□□□ 0.49
COL9A3-202ENST00000452372 MAGEA8P43361 318 aa18.13■□□□□ 0.49
COL9A3-202ENST00000452372 ATP12AP54707 1039 aa18.13■□□□□ 0.49
COL9A3-202ENST00000452372 GXYLT1Q4G148 440 aa18.13■□□□□ 0.49
COL9A3-202ENST00000452372 FLYWCH1Q4VC44 716 aa18.13■□□□□ 0.49
COL9A3-202ENST00000452372 EIPR1Q53HC9 387 aa18.13■□□□□ 0.49
COL9A3-202ENST00000452372 C6orf10Q5SRN2 563 aa18.13■□□□□ 0.49
COL9A3-202ENST00000452372 ATAD3BQ5T9A4 648 aa18.13■□□□□ 0.49
COL9A3-202ENST00000452372 AP1ARQ63HQ0 302 aa18.13■□□□□ 0.49
COL9A3-202ENST00000452372 SLC2A7Q6PXP3 512 aa18.13■□□□□ 0.49
COL9A3-202ENST00000452372 DNAJC14Q6Y2X3 702 aaPredicted RBP18.13■□□□□ 0.49
COL9A3-202ENST00000452372 CD163Q86VB7 1156 aa18.13■□□□□ 0.49
COL9A3-202ENST00000452372 OR2M3Q8NG83 312 aa18.13■□□□□ 0.49
COL9A3-202ENST00000452372 OR4K17Q8NGC6 315 aa18.13■□□□□ 0.49
COL9A3-202ENST00000452372 RAB8BQ92930 207 aa18.13■□□□□ 0.49
COL9A3-202ENST00000452372 MARVELD3Q96A59 401 aa18.13■□□□□ 0.49
COL9A3-202ENST00000452372 OR2B2Q9GZK3 357 aa18.13■□□□□ 0.49
COL9A3-202ENST00000452372 DSN1Q9H410 356 aa18.13■□□□□ 0.49
COL9A3-202ENST00000452372 MED11Q9P086 117 aa18.13■□□□□ 0.49
COL9A3-202ENST00000452372 ACAD8Q9UKU7 415 aa18.13■□□□□ 0.49
COL9A3-202ENST00000452372 MED12Q93074 2177 aa18.13■□□□□ 0.49
COL9A3-202ENST00000452372 CACNA1CQ13936 2221 aa18.13■□□□□ 0.49
COL9A3-202ENST00000452372 PRSS44E7EML9 344 aa18.12■□□□□ 0.49
COL9A3-202ENST00000452372 NPIPB9F8W1W9 429 aa18.12■□□□□ 0.49
COL9A3-202ENST00000452372 HMGN4O00479 90 aa18.12■□□□□ 0.49
COL9A3-202ENST00000452372 NR5A2O00482 541 aa18.12■□□□□ 0.49
COL9A3-202ENST00000452372 SCDO00767 359 aa18.12■□□□□ 0.49
COL9A3-202ENST00000452372 HNRNPRO43390 633 aaKnown RBP18.12■□□□□ 0.49
COL9A3-202ENST00000452372 STX11O75558 287 aa18.12■□□□□ 0.49
COL9A3-202ENST00000452372 CD1EP15812 388 aa18.12■□□□□ 0.49
COL9A3-202ENST00000452372 CAPN3P20807 821 aa18.12■□□□□ 0.49
COL9A3-202ENST00000452372 DPP4P27487 766 aa18.12■□□□□ 0.49
COL9A3-202ENST00000452372 ANXA11P50995 505 aaKnown RBP18.12■□□□□ 0.49
COL9A3-202ENST00000452372 DSCR4P56555 118 aaPredicted RBP18.12■□□□□ 0.49
COL9A3-202ENST00000452372 STX5Q13190 355 aa18.12■□□□□ 0.49
COL9A3-202ENST00000452372 NHSL2Q5HYW2 709 aa18.12■□□□□ 0.49
COL9A3-202ENST00000452372 WIPI1Q5MNZ9 446 aaPredicted RBP18.12■□□□□ 0.49
COL9A3-202ENST00000452372 MTFR2Q6P444 385 aa18.12■□□□□ 0.49
COL9A3-202ENST00000452372 C16orf62Q7Z3J2 963 aa18.12■□□□□ 0.49
COL9A3-202ENST00000452372 YRDCQ86U90 279 aaKnown RBP18.12■□□□□ 0.49
COL9A3-202ENST00000452372 MISPQ8IVT2 679 aa18.12■□□□□ 0.49
COL9A3-202ENST00000452372 PAIP1Q9H074 479 aaKnown RBP18.12■□□□□ 0.49
COL9A3-202ENST00000452372 TPT1P8Q9HAU6 139 aa18.12■□□□□ 0.49
COL9A3-202ENST00000452372 KLHL14Q9P2G3 628 aa18.12■□□□□ 0.49
COL9A3-202ENST00000452372 TNFRSF10DQ9UBN6 386 aa18.12■□□□□ 0.49
COL9A3-202ENST00000452372 PCDHB14Q9Y5E9 798 aa18.12■□□□□ 0.49
COL9A3-202ENST00000452372 TEP1Q99973 2627 aaKnown RBP18.11■□□□□ 0.49
COL9A3-202ENST00000452372 A0A096LPI6 279 aa18.11■□□□□ 0.49
COL9A3-202ENST00000452372 C15orf38-AP3S2A0A0A6YYH1 394 aa18.11■□□□□ 0.49
COL9A3-202ENST00000452372 A0A1W2PP18 115 aa18.11■□□□□ 0.49
COL9A3-202ENST00000452372 E9PLN8 166 aa18.11■□□□□ 0.49
COL9A3-202ENST00000452372 ZIC3O60481 467 aa18.11■□□□□ 0.49
COL9A3-202ENST00000452372 FCMRO60667 390 aa18.11■□□□□ 0.49
COL9A3-202ENST00000452372 ESRRAP11474 423 aaPredicted RBP18.11■□□□□ 0.49
COL9A3-202ENST00000452372 MVDP53602 400 aa18.11■□□□□ 0.49
COL9A3-202ENST00000452372 ADORA2A-AS1P86434 159 aa18.11■□□□□ 0.49
COL9A3-202ENST00000452372 KLHL26Q53HC5 615 aa18.11■□□□□ 0.49
COL9A3-202ENST00000452372 WLSQ5T9L3 541 aa18.11■□□□□ 0.49
COL9A3-202ENST00000452372 VASNQ6EMK4 673 aa18.11■□□□□ 0.49
COL9A3-202ENST00000452372 MRGPRGQ86SM5 289 aa18.11■□□□□ 0.49
COL9A3-202ENST00000452372 EID3Q8N140 333 aa18.11■□□□□ 0.49
COL9A3-202ENST00000452372 ZNF527Q8NB42 609 aa18.11■□□□□ 0.49
COL9A3-202ENST00000452372 OR14L1PQ8NHC6 308 aa18.11■□□□□ 0.49
COL9A3-202ENST00000452372 PNPT1Q8TCS8 783 aaKnown RBP18.11■□□□□ 0.49
COL9A3-202ENST00000452372 ROPN1LQ96C74 230 aa18.11■□□□□ 0.49
COL9A3-202ENST00000452372 VKORC1Q9BQB6 163 aa18.11■□□□□ 0.49
COL9A3-202ENST00000452372 NMUR2Q9GZQ4 415 aa18.11■□□□□ 0.49
COL9A3-202ENST00000452372 ZNF350Q9GZX5 532 aa18.11■□□□□ 0.49
COL9A3-202ENST00000452372 TP63Q9H3D4 680 aaPredicted RBP18.11■□□□□ 0.49
COL9A3-202ENST00000452372 PTGES2Q9H7Z7 377 aa18.11■□□□□ 0.49
COL9A3-202ENST00000452372 PNPLA3Q9NST1 481 aa18.11■□□□□ 0.49
COL9A3-202ENST00000452372 TAS2R10Q9NYW0 307 aa18.11■□□□□ 0.49
COL9A3-202ENST00000452372 SUCOQ9UBS9 1254 aaKnown RBP18.11■□□□□ 0.49
COL9A3-202ENST00000452372 LIPT1Q9Y234 373 aa18.11■□□□□ 0.49
COL9A3-202ENST00000452372 MEMO1Q9Y316 297 aa18.11■□□□□ 0.49
COL9A3-202ENST00000452372 SLC6A5Q9Y345 797 aa18.11■□□□□ 0.49
COL9A3-202ENST00000452372 KLF2Q9Y5W3 355 aaPredicted RBP18.11■□□□□ 0.49
COL9A3-202ENST00000452372 OTOGQ6ZRI0 2925 aa18.1■□□□□ 0.49
COL9A3-202ENST00000452372 NPIPA5A0A0B4J1W7 369 aa18.1■□□□□ 0.49
COL9A3-202ENST00000452372 PRAMEF27A3QJZ7 478 aa18.1■□□□□ 0.49
COL9A3-202ENST00000452372 NPIPA7E9PJI5 369 aa18.1■□□□□ 0.49
COL9A3-202ENST00000452372 NPIPA8P0DM63 369 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms