RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 ABCD3P28288 659 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 SLC6A6P31641 620 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 THBS4P35443 961 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 EIF1P41567 113 aaKnown RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 PTGER3P43115 390 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 CEBPAP49715 358 aaPredicted RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 MMP15P51511 669 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 HNRNPA3P51991 378 aaKnown RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 UBE2MP61081 183 aaKnown RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 ISL1P61371 349 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 UFM1P61960 85 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 SIM1P81133 766 aaPredicted RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 PIGFQ07326 219 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 PJVKQ0ZLH3 352 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 AQP6Q13520 282 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 ZNF266Q14584 549 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 ARHGAP19Q14CB8 494 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 ATP6V1FQ16864 119 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 COX19Q49B96 90 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 CT45A2Q5DJT8 189 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 ADGRF1Q5T601 910 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 LYRM7Q5U5X0 104 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 WDR74Q6RFH5 385 aaPredicted RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 DBX2Q6ZNG2 339 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 USP53Q70EK8 1073 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 SLC16A13Q7RTY0 426 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 OVCH1Q7RTY7 1134 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 ZNF551Q7Z340 670 aaPredicted RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 CEACAM19Q7Z692 300 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 ZNF433Q8N7K0 673 aaPredicted RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 DNAJC5GQ8N7S2 189 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 HUS1BQ8NHY5 278 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 WDR20Q8TBZ3 569 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 GPX8Q8TED1 209 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 HPSE2Q8WWQ2 592 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 PIGBQ92521 554 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 FAM46BQ96A09 425 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 TIFAQ96CG3 184 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 RNF170Q96K19 258 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 KCNJ15Q99712 375 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 MAP3K3Q99759 626 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 SLC35A5Q9BS91 424 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 TAPBPLQ9BX59 468 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 CIPCQ9C0C6 399 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 SLC25A51Q9H1U9 297 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 ARV1Q9H2C2 271 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 ACTL8Q9H568 366 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 ELP3Q9H9T3 547 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 TMEM27Q9HBJ8 222 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 APMAPQ9HDC9 416 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 ACKR4Q9NPB9 350 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 ARL15Q9NXU5 204 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 TAS2R5Q9NYW4 299 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 ZMYM5Q9UJ78 669 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 KCNG2Q9UJ96 466 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 PITPNC1Q9UKF7 332 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 NDRG4Q9ULP0 352 aaKnown RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 FZD10Q9ULW2 581 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 PSAT1Q9Y617 370 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 TMEM265A0A087WTH1 108 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 A0A0B4J293 547 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 TCRBV5S2A0A599 114 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 TRBC2A0A5B9 178 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 MEGF11A6BM72 1044 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 LRIT2A6NDA9 550 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 HSPB2A8KAH6 182 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 F5H5T6 163 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 H0YIN7 160 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 MFNGO00587 321 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 DVL1O14640 695 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 SCAMP3O14828 347 aaKnown RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 SYN3O14994 580 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 SLC16A5O15375 505 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 TRAF3IP2O43734 574 aaPredicted RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 GRAP2O75791 330 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 OPN1MWP04001 364 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 HEXAP06865 529 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 FHP07954 510 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 ALDOCP09972 364 aaKnown RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 SFTA3P0C7M3 94 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 OPN1MW2P0DN77 364 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 OPN1MW3P0DN78 364 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 PTNP21246 168 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 UQCRC2P22695 453 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 ATP5A1P25705 553 aaKnown RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 CMPK1P30085 196 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 OXTRP30559 389 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 ICAM3P32942 547 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 EPHX2P34913 555 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 MAP3K8P41279 467 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 KCNJ3P48549 501 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 CX3CR1P49238 355 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 MAN2A2P49641 1150 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 STK19P49842 368 aaPredicted RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 OR4D2P58180 307 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 C21orf58P58505 322 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 IL13RA1P78552 427 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 IRF8Q02556 426 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 MBTD1Q05BQ5 628 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms