RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 IL17FQ96PD4 163 aa13.05□□□□□ -0.32
VPS52-212ENST00000445902 NPAS1Q99742 590 aa13.05□□□□□ -0.32
VPS52-212ENST00000445902 FAIM2Q9BWQ8 316 aa13.05□□□□□ -0.32
VPS52-212ENST00000445902 LRRN3Q9H3W5 708 aa13.05□□□□□ -0.32
VPS52-212ENST00000445902 SEMA4GQ9NTN9 838 aa13.05□□□□□ -0.32
VPS52-212ENST00000445902 HPF1Q9NWY4 346 aa13.05□□□□□ -0.32
VPS52-212ENST00000445902 BABAM2Q9NXR7 383 aa13.05□□□□□ -0.32
VPS52-212ENST00000445902 COPZ2Q9P299 210 aa13.05□□□□□ -0.32
VPS52-212ENST00000445902 GMEB2Q9UKD1 530 aa13.05□□□□□ -0.32
VPS52-212ENST00000445902 PLAGL1Q9UM63 463 aa13.05□□□□□ -0.32
VPS52-212ENST00000445902 ADRB1P08588 477 aa13.04□□□□□ -0.32
VPS52-212ENST00000445902 GDNFP39905 211 aa13.04□□□□□ -0.32
VPS52-212ENST00000445902 DEFA5Q01523 94 aa13.04□□□□□ -0.32
VPS52-212ENST00000445902 LMAN2Q12907 356 aa13.04□□□□□ -0.32
VPS52-212ENST00000445902 HIST2H2AA3Q6FI13 130 aa13.04□□□□□ -0.32
VPS52-212ENST00000445902 LINC01599Q8WXQ3 324 aa13.04□□□□□ -0.32
VPS52-212ENST00000445902 VOPP1Q96AW1 172 aa13.04□□□□□ -0.32
VPS52-212ENST00000445902 F2RL3Q96RI0 385 aa13.04□□□□□ -0.32
VPS52-212ENST00000445902 PTPN18Q99952 460 aa13.04□□□□□ -0.32
VPS52-212ENST00000445902 DPH7Q9BTV6 452 aa13.04□□□□□ -0.32
VPS52-212ENST00000445902 RIOK2Q9BVS4 552 aaKnown RBP13.04□□□□□ -0.32
VPS52-212ENST00000445902 SYNDIG1Q9H7V2 258 aa13.04□□□□□ -0.32
VPS52-212ENST00000445902 NANSQ9NR45 359 aa13.04□□□□□ -0.32
VPS52-212ENST00000445902 P2RX2Q9UBL9 471 aa13.04□□□□□ -0.32
VPS52-212ENST00000445902 GPR55Q9Y2T6 319 aaPredicted RBP13.04□□□□□ -0.32
VPS52-212ENST00000445902 ZNF175Q9Y473 711 aa13.04□□□□□ -0.32
VPS52-212ENST00000445902 NPTNQ9Y639 398 aa13.04□□□□□ -0.32
VPS52-212ENST00000445902 MTCL1Q9Y4B5 1905 aaKnown RBP13.04□□□□□ -0.32
VPS52-212ENST00000445902 A8MXK9 166 aa13.04□□□□□ -0.32
VPS52-212ENST00000445902 TMEM189-UBE2V1I3L0A0 370 aa13.04□□□□□ -0.32
VPS52-212ENST00000445902 NFATC1O95644 943 aa13.04□□□□□ -0.32
VPS52-212ENST00000445902 IGHA1P01876 353 aa13.04□□□□□ -0.32
VPS52-212ENST00000445902 ATF1P18846 271 aa13.04□□□□□ -0.32
VPS52-212ENST00000445902 FUT1P19526 365 aa13.04□□□□□ -0.32
VPS52-212ENST00000445902 PAICSP22234 425 aaKnown RBP13.04□□□□□ -0.32
VPS52-212ENST00000445902 NFYAP23511 347 aaPredicted RBP13.04□□□□□ -0.32
VPS52-212ENST00000445902 OR1D2P34982 312 aa13.04□□□□□ -0.32
VPS52-212ENST00000445902 ZNF169Q14929 603 aaPredicted RBP13.04□□□□□ -0.32
VPS52-212ENST00000445902 ZNF783Q6ZMS7 281 aa13.04□□□□□ -0.32
VPS52-212ENST00000445902 UBE2Q1Q7Z7E8 422 aa13.04□□□□□ -0.32
VPS52-212ENST00000445902 NKAIN4Q8IVV8 208 aa13.04□□□□□ -0.32
VPS52-212ENST00000445902 RASGEF1AQ8N9B8 481 aa13.04□□□□□ -0.32
VPS52-212ENST00000445902 NLGN2Q8NFZ4 835 aa13.04□□□□□ -0.32
VPS52-212ENST00000445902 KAT2AQ92830 837 aa13.04□□□□□ -0.32
VPS52-212ENST00000445902 DPYSL5Q9BPU6 564 aa13.04□□□□□ -0.32
VPS52-212ENST00000445902 ZCCHC4Q9H5U6 513 aa13.04□□□□□ -0.32
VPS52-212ENST00000445902 PLSCR5A0PG75 271 aa13.03□□□□□ -0.32
VPS52-212ENST00000445902 SYNDIG1LA6NDD5 238 aa13.03□□□□□ -0.32
VPS52-212ENST00000445902 LINC01387J3KSC0 135 aa13.03□□□□□ -0.32
VPS52-212ENST00000445902 FOXE1O00358 373 aaPredicted RBP13.03□□□□□ -0.32
VPS52-212ENST00000445902 PLPP1O14494 284 aa13.03□□□□□ -0.32
VPS52-212ENST00000445902 CHRM4P08173 479 aa13.03□□□□□ -0.32
VPS52-212ENST00000445902 PTHLHP12272 177 aa13.03□□□□□ -0.32
VPS52-212ENST00000445902 UGT2B7P16662 529 aa13.03□□□□□ -0.32
VPS52-212ENST00000445902 CCR8P51685 355 aa13.03□□□□□ -0.32
VPS52-212ENST00000445902 KLF9Q13886 244 aaPredicted RBP13.03□□□□□ -0.32
VPS52-212ENST00000445902 MORN1Q5T089 497 aa13.03□□□□□ -0.32
VPS52-212ENST00000445902 CDC73Q6P1J9 531 aa13.03□□□□□ -0.32
VPS52-212ENST00000445902 FUT10Q6P4F1 479 aa13.03□□□□□ -0.32
VPS52-212ENST00000445902 IKBIPQ70UQ0 350 aa13.03□□□□□ -0.32
VPS52-212ENST00000445902 LINGO2Q7L985 606 aa13.03□□□□□ -0.32
VPS52-212ENST00000445902 ZNF454Q8N9F8 522 aa13.03□□□□□ -0.32
VPS52-212ENST00000445902 CHST14Q8NCH0 376 aa13.03□□□□□ -0.32
VPS52-212ENST00000445902 SLAIN1Q8ND83 568 aa13.03□□□□□ -0.32
VPS52-212ENST00000445902 BVESQ8NE79 360 aa13.03□□□□□ -0.32
VPS52-212ENST00000445902 GNPDA2Q8TDQ7 276 aa13.03□□□□□ -0.32
VPS52-212ENST00000445902 OR5P2Q8WZ92 322 aa13.03□□□□□ -0.32
VPS52-212ENST00000445902 SLC35G5Q96KT7 338 aa13.03□□□□□ -0.32
VPS52-212ENST00000445902 LYSMD1Q96S90 227 aa13.03□□□□□ -0.32
VPS52-212ENST00000445902 PIPOXQ9P0Z9 390 aa13.03□□□□□ -0.32
VPS52-212ENST00000445902 SPTBP11277 2137 aa13.03□□□□□ -0.32
VPS52-212ENST00000445902 DAPL1A0PJW8 107 aa13.03□□□□□ -0.32
VPS52-212ENST00000445902 GLOD5A6NK44 160 aa13.03□□□□□ -0.32
VPS52-212ENST00000445902 PRKRAO75569 313 aaKnown RBP13.03□□□□□ -0.32
VPS52-212ENST00000445902 UBL3O95164 117 aa13.03□□□□□ -0.32
VPS52-212ENST00000445902 HMGA1P17096 107 aaKnown RBP13.03□□□□□ -0.32
VPS52-212ENST00000445902 ANXA7P20073 488 aaKnown RBP13.03□□□□□ -0.32
VPS52-212ENST00000445902 TSPAN31Q12999 210 aa13.03□□□□□ -0.32
VPS52-212ENST00000445902 HLXQ14774 488 aaPredicted RBP13.03□□□□□ -0.32
VPS52-212ENST00000445902 SERPINA12Q8IW75 414 aa13.03□□□□□ -0.32
VPS52-212ENST00000445902 ACBD7Q8N6N7 88 aa13.03□□□□□ -0.32
VPS52-212ENST00000445902 ARL14EPQ8N8R7 260 aaPredicted RBP13.03□□□□□ -0.32
VPS52-212ENST00000445902 ZG16BQ96DA0 208 aa13.03□□□□□ -0.32
VPS52-212ENST00000445902 SAMD8Q96LT4 415 aa13.03□□□□□ -0.32
VPS52-212ENST00000445902 TIMP4Q99727 224 aa13.03□□□□□ -0.32
VPS52-212ENST00000445902 USB1Q9BQ65 265 aaKnown RBP13.03□□□□□ -0.32
VPS52-212ENST00000445902 HCAR1Q9BXC0 346 aa13.03□□□□□ -0.32
VPS52-212ENST00000445902 MARCH5Q9NX47 278 aa13.03□□□□□ -0.32
VPS52-212ENST00000445902 NTMQ9P121 344 aa13.03□□□□□ -0.32
VPS52-212ENST00000445902 ING1Q9UK53 422 aaPredicted RBP13.03□□□□□ -0.32
VPS52-212ENST00000445902 PCDHGA9Q9Y5G4 932 aaKnown RBP13.03□□□□□ -0.32
VPS52-212ENST00000445902 BACE2Q9Y5Z0 518 aa13.03□□□□□ -0.32
VPS52-212ENST00000445902 FRMPD3Q5JV73 1810 aa13.02□□□□□ -0.32
VPS52-212ENST00000445902 J3QLW9 94 aa13.02□□□□□ -0.32
VPS52-212ENST00000445902 MAGEB4O15481 346 aaPredicted RBP13.02□□□□□ -0.32
VPS52-212ENST00000445902 SUSD5O60279 629 aa13.02□□□□□ -0.32
VPS52-212ENST00000445902 STATHP02808 62 aa13.02□□□□□ -0.32
VPS52-212ENST00000445902 ZNF19P17023 458 aa13.02□□□□□ -0.32
VPS52-212ENST00000445902 PPP2R1BP30154 601 aa13.02□□□□□ -0.32
VPS52-212ENST00000445902 HTR1FP30939 366 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms