RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 PHPT1Q9NRX4 125 aaPredicted RBP3.61□□□□□ -1.83
UBR3-206ENST00000444475 USE1Q9NZ43 259 aa3.61□□□□□ -1.83
UBR3-206ENST00000444475 SAE1Q9UBE0 346 aaPredicted RBP3.61□□□□□ -1.83
UBR3-206ENST00000444475 ZNF282Q9UDV7 671 aaPredicted RBP3.61□□□□□ -1.83
UBR3-206ENST00000444475 OPN4Q9UHM6 478 aa3.61□□□□□ -1.83
UBR3-206ENST00000444475 BCAP29Q9UHQ4 241 aa3.61□□□□□ -1.83
UBR3-206ENST00000444475 MROH1Q8NDA8 1641 aa3.61□□□□□ -1.83
UBR3-206ENST00000444475 UQCRHLA0A096LP55 91 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 M0QZ24 198 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 CCRL2O00421 344 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 LDOC1O95751 146 aaPredicted RBP3.6□□□□□ -1.83
UBR3-206ENST00000444475 IGHV2-70P01814 119 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 UQCRHP07919 91 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 CBSLP0DN79 551 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 ZNF23P17027 643 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 ZP3P21754 424 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 COMTP21964 271 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 CBSP35520 551 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 KIR2DL3P43628 341 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 RPL21P46778 160 aaKnown RBP3.6□□□□□ -1.83
UBR3-206ENST00000444475 NPY2RP49146 381 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 SP3Q02447 781 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 CHRNEQ04844 493 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 KLC1Q07866 573 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 DUOXA2Q1HG44 320 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 LY6G6FQ5SQ64 297 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 C1orf220Q5T0J3 134 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 FAM46CQ5VWP2 391 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.6□□□□□ -1.83
UBR3-206ENST00000444475 CENPUQ71F23 418 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 SMIM15Q7Z3B0 74 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 DCP2Q8IU60 420 aaKnown RBP3.6□□□□□ -1.83
UBR3-206ENST00000444475 CNBD1Q8NA66 436 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 MFSD9Q8NBP5 474 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 OR4D5Q8NGN0 318 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 MRGPRDQ8TDS7 321 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 NEK7Q8TDX7 302 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 GIPC3Q8TF64 312 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 TMBIM1Q969X1 311 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 ZNF837Q96EG3 531 aaPredicted RBP3.6□□□□□ -1.83
UBR3-206ENST00000444475 WDR34Q96EX3 536 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 GUCD1Q96NT3 240 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 SEPHS2Q99611 448 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 UCK2Q9BZX2 261 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 ZNF703Q9H7S9 590 aaPredicted RBP3.6□□□□□ -1.83
UBR3-206ENST00000444475 TBC1D17Q9HA65 648 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 UBTD1Q9HAC8 227 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 THUMPD1Q9NXG2 353 aaKnown RBP3.6□□□□□ -1.83
UBR3-206ENST00000444475 EPHA6Q9UF33 1036 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 CCNL1Q9UK58 526 aaPredicted RBP3.6□□□□□ -1.83
UBR3-206ENST00000444475 MEMO1Q9Y316 297 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 CROCC2H7BZ55 1655 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 DISP2A7MBM2 1401 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 PRAG1Q86YV5 1406 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 A0A1B0GUS0 222 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 A0A1W2PNV4 684 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 M0R296 226 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 PRKAB2O43741 272 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 GATBO75879 557 aaKnown RBP3.6□□□□□ -1.83
UBR3-206ENST00000444475 TNNC2P02585 160 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 SAGP10523 405 aaPredicted RBP3.6□□□□□ -1.83
UBR3-206ENST00000444475 CD8BP10966 210 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 GP9P14770 177 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 ITPKBP27987 946 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 GKP32189 559 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 GDNFP39905 211 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 UQCRFS1P47985 274 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 DYNC1I2Q13409 638 aaKnown RBP3.6□□□□□ -1.83
UBR3-206ENST00000444475 CTTNQ14247 550 aaKnown RBP3.6□□□□□ -1.83
UBR3-206ENST00000444475 GANABQ14697 944 aaKnown RBP3.6□□□□□ -1.83
UBR3-206ENST00000444475 GPNMBQ14956 572 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 LY6KQ17RY6 165 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 HLA-BQ31612 363 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 DDI2Q5TDH0 399 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 FAM71F2Q6NXP2 309 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 TMPRSS11AQ6ZMR5 421 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 PRR23BQ6ZRT6 265 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 TGIF2LXQ8IUE1 241 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 PUSL1Q8N0Z8 303 aaKnown RBP3.6□□□□□ -1.83
UBR3-206ENST00000444475 OR5T2Q8NGG2 359 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 VANGL1Q8TAA9 524 aaPredicted RBP3.6□□□□□ -1.83
UBR3-206ENST00000444475 FAR1Q8WVX9 515 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 ERGIC1Q969X5 290 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 SLC35C1Q96A29 364 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 CTTNBP2NLQ9P2B4 639 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 ZNF490Q9ULM2 529 aaPredicted RBP3.6□□□□□ -1.83
UBR3-206ENST00000444475 FAM96BQ9Y3D0 163 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 NR2E1Q9Y466 385 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 NME7Q9Y5B8 376 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 HEY1Q9Y5J3 304 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 ALG6Q9Y672 507 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 AFF2P51816 1311 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 NKTRP30414 1462 aaKnown RBP3.6□□□□□ -1.83
UBR3-206ENST00000444475 ABCA6Q8N139 1617 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 NUP155O75694 1391 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 CEMIPQ8WUJ3 1361 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 PPIAL4CA0A0B4J2A2 164 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 A0A1B0GTI1 187 aa3.6□□□□□ -1.83
UBR3-206ENST00000444475 A0A1W2PQ45 241 aaPredicted RBP3.6□□□□□ -1.83
UBR3-206ENST00000444475 A0A1W2PQY0 241 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms