RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 GBX2P52951 348 aaPredicted RBP13.16□□□□□ -0.3
SMARCA4-204ENST00000444061 ATP6AP1Q15904 470 aa13.16□□□□□ -0.3
SMARCA4-204ENST00000444061 GOLM1Q8NBJ4 401 aa13.16□□□□□ -0.3
SMARCA4-204ENST00000444061 HDHD2Q9H0R4 259 aa13.16□□□□□ -0.3
SMARCA4-204ENST00000444061 TUBB1Q9H4B7 451 aa13.16□□□□□ -0.3
SMARCA4-204ENST00000444061 CXorf36Q9H7Y0 433 aa13.16□□□□□ -0.3
SMARCA4-204ENST00000444061 CNOT1A5YKK6 2376 aaKnown RBP13.16□□□□□ -0.3
SMARCA4-204ENST00000444061 SEC16AO15027 2179 aa13.16□□□□□ -0.3
SMARCA4-204ENST00000444061 GXYLT2A0PJZ3 443 aa13.16□□□□□ -0.3
SMARCA4-204ENST00000444061 G3V3Y1 287 aa13.16□□□□□ -0.3
SMARCA4-204ENST00000444061 TMPRSS11DO60235 418 aa13.16□□□□□ -0.3
SMARCA4-204ENST00000444061 NADKO95544 446 aaPredicted RBP13.16□□□□□ -0.3
SMARCA4-204ENST00000444061 GPR4P46093 362 aa13.16□□□□□ -0.3
SMARCA4-204ENST00000444061 CPEB2Q7Z5Q1 589 aaKnown RBP13.16□□□□□ -0.3
SMARCA4-204ENST00000444061 NRMQ8IXM6 262 aa13.16□□□□□ -0.3
SMARCA4-204ENST00000444061 ALDH16A1Q8IZ83 802 aa13.16□□□□□ -0.3
SMARCA4-204ENST00000444061 ZNF676Q8N7Q3 588 aa13.16□□□□□ -0.3
SMARCA4-204ENST00000444061 TCEANCQ8N8B7 351 aa13.16□□□□□ -0.3
SMARCA4-204ENST00000444061 TMEM165Q9HC07 324 aa13.16□□□□□ -0.3
SMARCA4-204ENST00000444061 CARD8Q9Y2G2 431 aa13.16□□□□□ -0.3
SMARCA4-204ENST00000444061 AHCTF1Q8WYP5 2266 aa13.16□□□□□ -0.3
SMARCA4-204ENST00000444061 SH3PXD2BA1X283 911 aa13.16□□□□□ -0.3
SMARCA4-204ENST00000444061 CLDN25C9JDP6 229 aa13.16□□□□□ -0.3
SMARCA4-204ENST00000444061 MKRN2OSH3BPM6 223 aa13.16□□□□□ -0.3
SMARCA4-204ENST00000444061 DEFB109BQ30KR1 87 aa13.16□□□□□ -0.3
SMARCA4-204ENST00000444061 CMPK2Q5EBM0 449 aa13.16□□□□□ -0.3
SMARCA4-204ENST00000444061 STPG1Q5TH74 334 aa13.16□□□□□ -0.3
SMARCA4-204ENST00000444061 UEVLDQ8IX04 471 aa13.16□□□□□ -0.3
SMARCA4-204ENST00000444061 CA13Q8N1Q1 262 aa13.16□□□□□ -0.3
SMARCA4-204ENST00000444061 DUSP19Q8WTR2 217 aa13.16□□□□□ -0.3
SMARCA4-204ENST00000444061 ZNF597Q96LX8 424 aa13.16□□□□□ -0.3
SMARCA4-204ENST00000444061 SPAARA0A1B0GVQ0 90 aa13.16□□□□□ -0.3
SMARCA4-204ENST00000444061 EIF1AYO14602 144 aaKnown RBP13.16□□□□□ -0.3
SMARCA4-204ENST00000444061 SLC30A4O14863 429 aa13.16□□□□□ -0.3
SMARCA4-204ENST00000444061 ZNF264O43296 627 aa13.16□□□□□ -0.3
SMARCA4-204ENST00000444061 CSNK2A1P68400 391 aaPredicted RBP13.16□□□□□ -0.3
SMARCA4-204ENST00000444061 PIN1Q13526 163 aaPredicted RBP13.16□□□□□ -0.3
SMARCA4-204ENST00000444061 TSLPQ969D9 159 aa13.16□□□□□ -0.3
SMARCA4-204ENST00000444061 NRSN2Q9GZP1 204 aa13.16□□□□□ -0.3
SMARCA4-204ENST00000444061 CXorf21Q9HAI6 301 aa13.16□□□□□ -0.3
SMARCA4-204ENST00000444061 ANKRD10Q9NXR5 420 aa13.16□□□□□ -0.3
SMARCA4-204ENST00000444061 FGF17O60258 216 aa13.15□□□□□ -0.3
SMARCA4-204ENST00000444061 DDAH2O95865 285 aa13.15□□□□□ -0.3
SMARCA4-204ENST00000444061 ARAFP10398 606 aa13.15□□□□□ -0.3
SMARCA4-204ENST00000444061 DBTP11182 482 aaKnown RBP13.15□□□□□ -0.3
SMARCA4-204ENST00000444061 PSPHP78330 225 aa13.15□□□□□ -0.3
SMARCA4-204ENST00000444061 VLDLRP98155 873 aa13.15□□□□□ -0.3
SMARCA4-204ENST00000444061 CHRNEQ04844 493 aa13.15□□□□□ -0.3
SMARCA4-204ENST00000444061 MRPL49Q13405 166 aaKnown RBP13.15□□□□□ -0.3
SMARCA4-204ENST00000444061 PIGGQ5H8A4 983 aa13.15□□□□□ -0.3
SMARCA4-204ENST00000444061 MED25Q71SY5 747 aa13.15□□□□□ -0.3
SMARCA4-204ENST00000444061 SLCO6A1Q86UG4 719 aa13.15□□□□□ -0.3
SMARCA4-204ENST00000444061 MISPQ8IVT2 679 aa13.15□□□□□ -0.3
SMARCA4-204ENST00000444061 EVA1AQ9H8M9 152 aa13.15□□□□□ -0.3
SMARCA4-204ENST00000444061 MBD2Q9UBB5 411 aa13.15□□□□□ -0.3
SMARCA4-204ENST00000444061 MRPS7Q9Y2R9 242 aaKnown RBP13.15□□□□□ -0.3
SMARCA4-204ENST00000444061 DLL1O00548 723 aa13.15□□□□□ -0.3
SMARCA4-204ENST00000444061 SOCS2O14508 198 aa13.15□□□□□ -0.3
SMARCA4-204ENST00000444061 CASKO14936 926 aa13.15□□□□□ -0.3
SMARCA4-204ENST00000444061 HRO43593 1189 aa13.15□□□□□ -0.3
SMARCA4-204ENST00000444061 TSPAN9O75954 239 aa13.15□□□□□ -0.3
SMARCA4-204ENST00000444061 FMO3P31513 532 aa13.15□□□□□ -0.3
SMARCA4-204ENST00000444061 RASGEF1BQ0VAM2 473 aa13.15□□□□□ -0.3
SMARCA4-204ENST00000444061 QPRTQ15274 297 aa13.15□□□□□ -0.3
SMARCA4-204ENST00000444061 WDR20Q8TBZ3 569 aa13.15□□□□□ -0.3
SMARCA4-204ENST00000444061 LMF2Q9BU23 707 aaKnown RBP13.15□□□□□ -0.3
SMARCA4-204ENST00000444061 D6RAR5 112 aa13.15□□□□□ -0.3
SMARCA4-204ENST00000444061 NRG2O14511 850 aaPredicted RBP13.15□□□□□ -0.3
SMARCA4-204ENST00000444061 SLC15A1P46059 708 aa13.15□□□□□ -0.3
SMARCA4-204ENST00000444061 XKR7Q5GH72 579 aa13.15□□□□□ -0.3
SMARCA4-204ENST00000444061 HMBOX1Q6NT76 420 aa13.15□□□□□ -0.3
SMARCA4-204ENST00000444061 C1orf94Q6P1W5 598 aa13.15□□□□□ -0.3
SMARCA4-204ENST00000444061 TMPPEQ6ZT21 453 aa13.15□□□□□ -0.3
SMARCA4-204ENST00000444061 TREX2Q9BQ50 279 aaPredicted RBP13.15□□□□□ -0.3
SMARCA4-204ENST00000444061 ITPAQ9BY32 194 aa13.15□□□□□ -0.3
SMARCA4-204ENST00000444061 ASIC5Q9NY37 505 aa13.15□□□□□ -0.3
SMARCA4-204ENST00000444061 ASXL3Q9C0F0 2248 aa13.15□□□□□ -0.3
SMARCA4-204ENST00000444061 LOC100130705A0A1B0GUX0 176 aa13.15□□□□□ -0.3
SMARCA4-204ENST00000444061 ARPC4P59998 168 aa13.15□□□□□ -0.3
SMARCA4-204ENST00000444061 C17orf67Q0P5P2 114 aa13.15□□□□□ -0.3
SMARCA4-204ENST00000444061 AGERQ15109 404 aa13.15□□□□□ -0.3
SMARCA4-204ENST00000444061 FCRLBQ6BAA4 426 aa13.15□□□□□ -0.3
SMARCA4-204ENST00000444061 ADNP2Q6IQ32 1131 aa13.15□□□□□ -0.3
SMARCA4-204ENST00000444061 KLHL36Q8N4N3 616 aa13.15□□□□□ -0.3
SMARCA4-204ENST00000444061 OR4C15Q8NGM1 316 aa13.15□□□□□ -0.3
SMARCA4-204ENST00000444061 RAB2BQ8WUD1 216 aa13.15□□□□□ -0.3
SMARCA4-204ENST00000444061 SLC7A7Q9UM01 511 aa13.15□□□□□ -0.3
SMARCA4-204ENST00000444061 TMA7Q9Y2S6 64 aaKnown RBP13.15□□□□□ -0.3
SMARCA4-204ENST00000444061 GPC6Q9Y625 555 aaPredicted RBP13.15□□□□□ -0.3
SMARCA4-204ENST00000444061 SPTBN2O15020 2390 aa13.15□□□□□ -0.3
SMARCA4-204ENST00000444061 FOLR1P15328 257 aa13.14□□□□□ -0.31
SMARCA4-204ENST00000444061 BTG2P78543 158 aa13.14□□□□□ -0.31
SMARCA4-204ENST00000444061 ZNF423Q2M1K9 1284 aa13.14□□□□□ -0.31
SMARCA4-204ENST00000444061 TMEM201Q5SNT2 666 aa13.14□□□□□ -0.31
SMARCA4-204ENST00000444061 LRIF1Q5T3J3 769 aa13.14□□□□□ -0.31
SMARCA4-204ENST00000444061 ZNF57Q68EA5 555 aaPredicted RBP13.14□□□□□ -0.31
SMARCA4-204ENST00000444061 MFSD12Q6NUT3 480 aa13.14□□□□□ -0.31
SMARCA4-204ENST00000444061 ULK3Q6PHR2 472 aa13.14□□□□□ -0.31
SMARCA4-204ENST00000444061 VRK2Q86Y07 508 aa13.14□□□□□ -0.31
SMARCA4-204ENST00000444061 OR6N2Q8NGY6 317 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms