RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 H3BNH8 94 aa11.22□□□□□ -0.61
USP1-203ENST00000442679 FBP2O00757 339 aa11.22□□□□□ -0.61
USP1-203ENST00000442679 SLC19A2O60779 497 aa11.22□□□□□ -0.61
USP1-203ENST00000442679 ZIC2O95409 532 aaPredicted RBP11.22□□□□□ -0.61
USP1-203ENST00000442679 H6PDO95479 791 aa11.22□□□□□ -0.61
USP1-203ENST00000442679 ABOP16442 354 aa11.22□□□□□ -0.61
USP1-203ENST00000442679 HPCAP84074 193 aa11.22□□□□□ -0.61
USP1-203ENST00000442679 CHRNEQ04844 493 aa11.22□□□□□ -0.61
USP1-203ENST00000442679 NFYCQ13952 458 aa11.22□□□□□ -0.61
USP1-203ENST00000442679 CYLC2Q14093 348 aaPredicted RBP11.22□□□□□ -0.61
USP1-203ENST00000442679 RGNQ15493 299 aa11.22□□□□□ -0.61
USP1-203ENST00000442679 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.22□□□□□ -0.61
USP1-203ENST00000442679 MMEL1Q495T6 779 aa11.22□□□□□ -0.61
USP1-203ENST00000442679 EIPR1Q53HC9 387 aa11.22□□□□□ -0.61
USP1-203ENST00000442679 RUNDC3AQ59EK9 446 aa11.22□□□□□ -0.61
USP1-203ENST00000442679 WIPI1Q5MNZ9 446 aaPredicted RBP11.22□□□□□ -0.61
USP1-203ENST00000442679 PDZK1Q5T2W1 519 aa11.22□□□□□ -0.61
USP1-203ENST00000442679 AP1ARQ63HQ0 302 aa11.22□□□□□ -0.61
USP1-203ENST00000442679 TYW3Q6IPR3 259 aaKnown RBP11.22□□□□□ -0.61
USP1-203ENST00000442679 FRRS1Q6ZNA5 592 aa11.22□□□□□ -0.61
USP1-203ENST00000442679 LRRC74BQ6ZQY2 392 aa11.22□□□□□ -0.61
USP1-203ENST00000442679 SNX32Q86XE0 403 aa11.22□□□□□ -0.61
USP1-203ENST00000442679 MISPQ8IVT2 679 aa11.22□□□□□ -0.61
USP1-203ENST00000442679 ZNF614Q8N883 585 aa11.22□□□□□ -0.61
USP1-203ENST00000442679 FADS6Q8N9I5 356 aa11.22□□□□□ -0.61
USP1-203ENST00000442679 FAM83FQ8NEG4 500 aaPredicted RBP11.22□□□□□ -0.61
USP1-203ENST00000442679 OR2M3Q8NG83 312 aa11.22□□□□□ -0.61
USP1-203ENST00000442679 OR14L1PQ8NHC6 308 aa11.22□□□□□ -0.61
USP1-203ENST00000442679 PHOSPHO1Q8TCT1 267 aa11.22□□□□□ -0.61
USP1-203ENST00000442679 DTNBP1Q96EV8 351 aa11.22□□□□□ -0.61
USP1-203ENST00000442679 CCDC106Q9BWC9 280 aa11.22□□□□□ -0.61
USP1-203ENST00000442679 SAP130Q9H0E3 1048 aa11.22□□□□□ -0.61
USP1-203ENST00000442679 PTGES2Q9H7Z7 377 aa11.22□□□□□ -0.61
USP1-203ENST00000442679 MTHFD2LQ9H903 347 aaPredicted RBP11.22□□□□□ -0.61
USP1-203ENST00000442679 TAS2R10Q9NYW0 307 aa11.22□□□□□ -0.61
USP1-203ENST00000442679 P2RX2Q9UBL9 471 aa11.22□□□□□ -0.61
USP1-203ENST00000442679 DKKL1Q9UK85 242 aa11.22□□□□□ -0.61
USP1-203ENST00000442679 DTNAQ9Y4J8 743 aa11.22□□□□□ -0.61
USP1-203ENST00000442679 SHANK1Q9Y566 2161 aa11.21□□□□□ -0.61
USP1-203ENST00000442679 TRGV8A0A0C4DH27 118 aa11.21□□□□□ -0.61
USP1-203ENST00000442679 TMEM247A6NEH6 219 aa11.21□□□□□ -0.61
USP1-203ENST00000442679 BBIP1A8MTZ0 92 aa11.21□□□□□ -0.61
USP1-203ENST00000442679 NPIPA2E9PIF3 369 aa11.21□□□□□ -0.61
USP1-203ENST00000442679 NPIPA3F8WFD2 350 aa11.21□□□□□ -0.61
USP1-203ENST00000442679 GTPBP1O00178 669 aaKnown RBP11.21□□□□□ -0.61
USP1-203ENST00000442679 AQP7O14520 342 aa11.21□□□□□ -0.61
USP1-203ENST00000442679 GMFGO60234 142 aa11.21□□□□□ -0.61
USP1-203ENST00000442679 KIAA0513O60268 411 aa11.21□□□□□ -0.61
USP1-203ENST00000442679 ZIC3O60481 467 aa11.21□□□□□ -0.61
USP1-203ENST00000442679 UGT2B17O75795 530 aa11.21□□□□□ -0.61
USP1-203ENST00000442679 CHRM4P08173 479 aa11.21□□□□□ -0.61
USP1-203ENST00000442679 STSP08842 583 aa11.21□□□□□ -0.61
USP1-203ENST00000442679 NUDT7P0C024 238 aa11.21□□□□□ -0.61
USP1-203ENST00000442679 TFPTP0C1Z6 253 aa11.21□□□□□ -0.61
USP1-203ENST00000442679 DPP4P27487 766 aa11.21□□□□□ -0.61
USP1-203ENST00000442679 MSX1P28360 303 aa11.21□□□□□ -0.61
USP1-203ENST00000442679 SRD5A2P31213 254 aa11.21□□□□□ -0.61
USP1-203ENST00000442679 CASP6P55212 293 aa11.21□□□□□ -0.61
USP1-203ENST00000442679 DSCR4P56555 118 aaPredicted RBP11.21□□□□□ -0.61
USP1-203ENST00000442679 FADDQ13158 208 aa11.21□□□□□ -0.61
USP1-203ENST00000442679 CD226Q15762 336 aa11.21□□□□□ -0.61
USP1-203ENST00000442679 ZNF141Q15928 474 aa11.21□□□□□ -0.61
USP1-203ENST00000442679 COQ5Q5HYK3 327 aa11.21□□□□□ -0.61
USP1-203ENST00000442679 C1QL3Q5VWW1 255 aa11.21□□□□□ -0.61
USP1-203ENST00000442679 REP15Q6BDI9 236 aa11.21□□□□□ -0.61
USP1-203ENST00000442679 Q6ZPB1 254 aaPredicted RBP11.21□□□□□ -0.61
USP1-203ENST00000442679 MTERF4Q7Z6M4 381 aaKnown RBP11.21□□□□□ -0.61
USP1-203ENST00000442679 ZNF619Q8N2I2 560 aa11.21□□□□□ -0.61
USP1-203ENST00000442679 NEIL3Q8TAT5 605 aa11.21□□□□□ -0.61
USP1-203ENST00000442679 FAM57AQ8TBR7 257 aa11.21□□□□□ -0.61
USP1-203ENST00000442679 SLC38A5Q8WUX1 472 aa11.21□□□□□ -0.61
USP1-203ENST00000442679 ZG16BQ96DA0 208 aa11.21□□□□□ -0.61
USP1-203ENST00000442679 SH3YL1Q96HL8 342 aaPredicted RBP11.21□□□□□ -0.61
USP1-203ENST00000442679 ANKRD27Q96NW4 1050 aa11.21□□□□□ -0.61
USP1-203ENST00000442679 CCT8L2Q96SF2 557 aa11.21□□□□□ -0.61
USP1-203ENST00000442679 CGREF1Q99674 301 aa11.21□□□□□ -0.61
USP1-203ENST00000442679 CPPED1Q9BRF8 314 aaPredicted RBP11.21□□□□□ -0.61
USP1-203ENST00000442679 THUMPD3Q9BV44 507 aaKnown RBP11.21□□□□□ -0.61
USP1-203ENST00000442679 OR2B2Q9GZK3 357 aa11.21□□□□□ -0.61
USP1-203ENST00000442679 SLC38A1Q9H2H9 487 aa11.21□□□□□ -0.61
USP1-203ENST00000442679 TNFRSF10DQ9UBN6 386 aa11.21□□□□□ -0.61
USP1-203ENST00000442679 KCNE5Q9UJ90 142 aa11.21□□□□□ -0.61
USP1-203ENST00000442679 ADAM21Q9UKJ8 722 aa11.21□□□□□ -0.61
USP1-203ENST00000442679 CORO2BQ9UQ03 480 aa11.21□□□□□ -0.61
USP1-203ENST00000442679 ARL2BPQ9Y2Y0 163 aa11.21□□□□□ -0.61
USP1-203ENST00000442679 SLC6A5Q9Y345 797 aa11.21□□□□□ -0.61
USP1-203ENST00000442679 MRPS18CQ9Y3D5 142 aaKnown RBP11.21□□□□□ -0.61
USP1-203ENST00000442679 GMEB1Q9Y692 573 aa11.21□□□□□ -0.61
USP1-203ENST00000442679 NUP214P35658 2090 aaPredicted RBP11.21□□□□□ -0.62
USP1-203ENST00000442679 EXPH5Q8NEV8 1989 aa11.21□□□□□ -0.62
USP1-203ENST00000442679 C15orf38-AP3S2A0A0A6YYH1 394 aa11.2□□□□□ -0.62
USP1-203ENST00000442679 OR14I1A6ND48 311 aa11.2□□□□□ -0.62
USP1-203ENST00000442679 SERINC4A6NH21 518 aa11.2□□□□□ -0.62
USP1-203ENST00000442679 PRRG2O14669 202 aa11.2□□□□□ -0.62
USP1-203ENST00000442679 MRASO14807 208 aa11.2□□□□□ -0.62
USP1-203ENST00000442679 LRRTM2O43300 516 aa11.2□□□□□ -0.62
USP1-203ENST00000442679 HCRTR2O43614 444 aa11.2□□□□□ -0.62
USP1-203ENST00000442679 TNFRSF21O75509 655 aa11.2□□□□□ -0.62
USP1-203ENST00000442679 BCHEP06276 602 aa11.2□□□□□ -0.62
USP1-203ENST00000442679 TPOP07202 933 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms