RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 HOXD1Q9GZZ0 328 aa17.72■□□□□ 0.43
SEMA3B-206ENST00000439487 SLC25A37Q9NYZ2 338 aa17.72■□□□□ 0.43
SEMA3B-206ENST00000439487 SPRR3Q9UBC9 169 aa17.72■□□□□ 0.43
SEMA3B-206ENST00000439487 LEF1Q9UJU2 399 aaPredicted RBP17.72■□□□□ 0.43
SEMA3B-206ENST00000439487 TINAGQ9UJW2 476 aa17.72■□□□□ 0.43
SEMA3B-206ENST00000439487 MKLN1Q9UL63 735 aa17.72■□□□□ 0.43
SEMA3B-206ENST00000439487 SLC6A5Q9Y345 797 aa17.72■□□□□ 0.43
SEMA3B-206ENST00000439487 NDUFAF1Q9Y375 327 aa17.72■□□□□ 0.43
SEMA3B-206ENST00000439487 GMNCA6NCL1 334 aa17.71■□□□□ 0.43
SEMA3B-206ENST00000439487 NPIPB9F8W1W9 429 aa17.71■□□□□ 0.43
SEMA3B-206ENST00000439487 CLIC1O00299 241 aa17.71■□□□□ 0.43
SEMA3B-206ENST00000439487 LRRTM2O43300 516 aa17.71■□□□□ 0.43
SEMA3B-206ENST00000439487 GMFGO60234 142 aa17.71■□□□□ 0.43
SEMA3B-206ENST00000439487 ETFAP13804 333 aa17.71■□□□□ 0.43
SEMA3B-206ENST00000439487 TCEA1P23193 301 aaKnown RBP17.71■□□□□ 0.43
SEMA3B-206ENST00000439487 CRATP43155 626 aa17.71■□□□□ 0.43
SEMA3B-206ENST00000439487 CA7P43166 264 aa17.71■□□□□ 0.43
SEMA3B-206ENST00000439487 TXNL4AP83876 142 aaKnown RBP17.71■□□□□ 0.43
SEMA3B-206ENST00000439487 C17orf67Q0P5P2 114 aa17.71■□□□□ 0.43
SEMA3B-206ENST00000439487 KLF10Q13118 480 aa17.71■□□□□ 0.43
SEMA3B-206ENST00000439487 SYPL1Q16563 259 aa17.71■□□□□ 0.43
SEMA3B-206ENST00000439487 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.71■□□□□ 0.43
SEMA3B-206ENST00000439487 GPAT3Q53EU6 434 aa17.71■□□□□ 0.43
SEMA3B-206ENST00000439487 C4orf17Q53FE4 359 aa17.71■□□□□ 0.43
SEMA3B-206ENST00000439487 SPATA21Q7Z572 469 aa17.71■□□□□ 0.43
SEMA3B-206ENST00000439487 FJX1Q86VR8 437 aa17.71■□□□□ 0.43
SEMA3B-206ENST00000439487 DOLPP1Q86YN1 238 aa17.71■□□□□ 0.43
SEMA3B-206ENST00000439487 ZNF614Q8N883 585 aa17.71■□□□□ 0.43
SEMA3B-206ENST00000439487 ANKFN1Q8N957 763 aa17.71■□□□□ 0.43
SEMA3B-206ENST00000439487 FAM57AQ8TBR7 257 aa17.71■□□□□ 0.43
SEMA3B-206ENST00000439487 OR2B2Q9GZK3 357 aa17.71■□□□□ 0.43
SEMA3B-206ENST00000439487 ZNF350Q9GZX5 532 aa17.71■□□□□ 0.43
SEMA3B-206ENST00000439487 VAPAQ9P0L0 249 aa17.71■□□□□ 0.43
SEMA3B-206ENST00000439487 ERRFI1Q9UJM3 462 aaPredicted RBP17.71■□□□□ 0.43
SEMA3B-206ENST00000439487 DKKL1Q9UK85 242 aa17.71■□□□□ 0.43
SEMA3B-206ENST00000439487 SLC5A6Q9Y289 635 aa17.71■□□□□ 0.43
SEMA3B-206ENST00000439487 NCOA6Q14686 2063 aaPredicted RBP17.7■□□□□ 0.42
SEMA3B-206ENST00000439487 A0A1W2PQD3 144 aa17.7■□□□□ 0.42
SEMA3B-206ENST00000439487 CLEC18AA5D8T8 446 aa17.7■□□□□ 0.42
SEMA3B-206ENST00000439487 PRRG2O14669 202 aa17.7■□□□□ 0.42
SEMA3B-206ENST00000439487 ANGPT2O15123 496 aa17.7■□□□□ 0.42
SEMA3B-206ENST00000439487 AGFG2O95081 481 aa17.7■□□□□ 0.42
SEMA3B-206ENST00000439487 DPP4P27487 766 aa17.7■□□□□ 0.42
SEMA3B-206ENST00000439487 SRD5A2P31213 254 aa17.7■□□□□ 0.42
SEMA3B-206ENST00000439487 CASP6P55212 293 aa17.7■□□□□ 0.42
SEMA3B-206ENST00000439487 CD226Q15762 336 aa17.7■□□□□ 0.42
SEMA3B-206ENST00000439487 KLHL26Q53HC5 615 aa17.7■□□□□ 0.42
SEMA3B-206ENST00000439487 TYW3Q6IPR3 259 aaKnown RBP17.7■□□□□ 0.42
SEMA3B-206ENST00000439487 CLEC18BQ6UXF7 455 aa17.7■□□□□ 0.42
SEMA3B-206ENST00000439487 DLEU7Q6UYE1 221 aa17.7■□□□□ 0.42
SEMA3B-206ENST00000439487 CPLX4Q7Z7G2 160 aa17.7■□□□□ 0.42
SEMA3B-206ENST00000439487 CD163Q86VB7 1156 aa17.7■□□□□ 0.42
SEMA3B-206ENST00000439487 RETREG3Q86VR2 466 aa17.7■□□□□ 0.42
SEMA3B-206ENST00000439487 FAM26EQ8N5C1 309 aa17.7■□□□□ 0.42
SEMA3B-206ENST00000439487 ZNF527Q8NB42 609 aa17.7■□□□□ 0.42
SEMA3B-206ENST00000439487 CLEC18CQ8NCF0 446 aa17.7■□□□□ 0.42
SEMA3B-206ENST00000439487 OR5M9Q8NGP3 310 aa17.7■□□□□ 0.42
SEMA3B-206ENST00000439487 OR14L1PQ8NHC6 308 aa17.7■□□□□ 0.42
SEMA3B-206ENST00000439487 PHOSPHO1Q8TCT1 267 aa17.7■□□□□ 0.42
SEMA3B-206ENST00000439487 TSPEARQ8WU66 669 aa17.7■□□□□ 0.42
SEMA3B-206ENST00000439487 RELTQ969Z4 430 aa17.7■□□□□ 0.42
SEMA3B-206ENST00000439487 NMUR2Q9GZQ4 415 aa17.7■□□□□ 0.42
SEMA3B-206ENST00000439487 NSRP1Q9H0G5 558 aaKnown RBP17.7■□□□□ 0.42
SEMA3B-206ENST00000439487 KCNE5Q9UJ90 142 aa17.7■□□□□ 0.42
SEMA3B-206ENST00000439487 ACAD8Q9UKU7 415 aa17.7■□□□□ 0.42
SEMA3B-206ENST00000439487 WDR45Q9Y484 360 aa17.7■□□□□ 0.42
SEMA3B-206ENST00000439487 DTNAQ9Y4J8 743 aa17.7■□□□□ 0.42
SEMA3B-206ENST00000439487 ICE1Q9Y2F5 2266 aa17.69■□□□□ 0.42
SEMA3B-206ENST00000439487 SPTAN1Q13813 2472 aaKnown RBP17.69■□□□□ 0.42
SEMA3B-206ENST00000439487 IGLV3-32A0A0A0MS00 114 aa17.69■□□□□ 0.42
SEMA3B-206ENST00000439487 TRBV5-3A0A0A0MS03 114 aa17.69■□□□□ 0.42
SEMA3B-206ENST00000439487 C15orf38-AP3S2A0A0A6YYH1 394 aa17.69■□□□□ 0.42
SEMA3B-206ENST00000439487 CENPVL1A0A0U1RR11 272 aa17.69■□□□□ 0.42
SEMA3B-206ENST00000439487 A0A1B0GUH1 482 aa17.69■□□□□ 0.42
SEMA3B-206ENST00000439487 OR14I1A6ND48 311 aa17.69■□□□□ 0.42
SEMA3B-206ENST00000439487 CCL21O00585 134 aa17.69■□□□□ 0.42
SEMA3B-206ENST00000439487 H6PDO95479 791 aa17.69■□□□□ 0.42
SEMA3B-206ENST00000439487 MAGEA8P43361 318 aa17.69■□□□□ 0.42
SEMA3B-206ENST00000439487 DSCR4P56555 118 aaPredicted RBP17.69■□□□□ 0.42
SEMA3B-206ENST00000439487 DSTNP60981 165 aa17.69■□□□□ 0.42
SEMA3B-206ENST00000439487 CHRNEQ04844 493 aa17.69■□□□□ 0.42
SEMA3B-206ENST00000439487 RGNQ15493 299 aa17.69■□□□□ 0.42
SEMA3B-206ENST00000439487 GXYLT1Q4G148 440 aa17.69■□□□□ 0.42
SEMA3B-206ENST00000439487 PDZK1Q5T2W1 519 aa17.69■□□□□ 0.42
SEMA3B-206ENST00000439487 C3P1Q6ZMU1 363 aa17.69■□□□□ 0.42
SEMA3B-206ENST00000439487 FRRS1Q6ZNA5 592 aa17.69■□□□□ 0.42
SEMA3B-206ENST00000439487 SARAFQ96BY9 339 aa17.69■□□□□ 0.42
SEMA3B-206ENST00000439487 SH3YL1Q96HL8 342 aaPredicted RBP17.69■□□□□ 0.42
SEMA3B-206ENST00000439487 PNPLA3Q9NST1 481 aa17.69■□□□□ 0.42
SEMA3B-206ENST00000439487 MRGBPQ9NV56 204 aa17.69■□□□□ 0.42
SEMA3B-206ENST00000439487 TAS2R10Q9NYW0 307 aa17.69■□□□□ 0.42
SEMA3B-206ENST00000439487 ARMCX1Q9P291 453 aa17.69■□□□□ 0.42
SEMA3B-206ENST00000439487 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.69■□□□□ 0.42
SEMA3B-206ENST00000439487 LIPT1Q9Y234 373 aa17.69■□□□□ 0.42
SEMA3B-206ENST00000439487 FBP2O00757 339 aa17.68■□□□□ 0.42
SEMA3B-206ENST00000439487 OIP5O43482 229 aa17.68■□□□□ 0.42
SEMA3B-206ENST00000439487 KIAA0513O60268 411 aa17.68■□□□□ 0.42
SEMA3B-206ENST00000439487 ZIC3O60481 467 aa17.68■□□□□ 0.42
SEMA3B-206ENST00000439487 TNFRSF21O75509 655 aa17.68■□□□□ 0.42
SEMA3B-206ENST00000439487 UGT2B17O75795 530 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms