RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 TIMM29Q9BSF4 260 aa15.29■□□□□ 0.04
CLCNKA-203ENST00000439316 ACTRT3Q9BYD9 372 aa15.29■□□□□ 0.04
CLCNKA-203ENST00000439316 TRIM45Q9H8W5 580 aaPredicted RBP15.29■□□□□ 0.04
CLCNKA-203ENST00000439316 SYNPO2LQ9H987 977 aa15.29■□□□□ 0.04
CLCNKA-203ENST00000439316 ACOXLQ9NUZ1 547 aa15.29■□□□□ 0.04
CLCNKA-203ENST00000439316 ADAM30Q9UKF2 790 aa15.29■□□□□ 0.04
CLCNKA-203ENST00000439316 COL4A2P08572 1712 aa15.29■□□□□ 0.04
CLCNKA-203ENST00000439316 PSKH1P11801 424 aa15.29■□□□□ 0.04
CLCNKA-203ENST00000439316 TEAD1P28347 426 aa15.29■□□□□ 0.04
CLCNKA-203ENST00000439316 PDX1P52945 283 aa15.29■□□□□ 0.04
CLCNKA-203ENST00000439316 BDH1Q02338 343 aa15.29■□□□□ 0.04
CLCNKA-203ENST00000439316 SMAD4Q13485 552 aaKnown RBP15.29■□□□□ 0.04
CLCNKA-203ENST00000439316 EFR3AQ14156 821 aa15.29■□□□□ 0.04
CLCNKA-203ENST00000439316 INSL4Q14641 139 aa15.29■□□□□ 0.04
CLCNKA-203ENST00000439316 AGERQ15109 404 aa15.29■□□□□ 0.04
CLCNKA-203ENST00000439316 IRF4Q15306 451 aa15.29■□□□□ 0.04
CLCNKA-203ENST00000439316 SF3A2Q15428 464 aaKnown RBP15.29■□□□□ 0.04
CLCNKA-203ENST00000439316 AGBL4Q5VU57 503 aa15.29■□□□□ 0.04
CLCNKA-203ENST00000439316 TMEM91Q6ZNR0 172 aa15.29■□□□□ 0.04
CLCNKA-203ENST00000439316 FBXL6Q8N531 539 aa15.29■□□□□ 0.04
CLCNKA-203ENST00000439316 TOR1AIP2Q8NFQ8 470 aa15.29■□□□□ 0.04
CLCNKA-203ENST00000439316 OR2L3Q8NG85 312 aa15.29■□□□□ 0.04
CLCNKA-203ENST00000439316 OR52E1Q8NGJ3 308 aa15.29■□□□□ 0.04
CLCNKA-203ENST00000439316 TMEM255BQ8WV15 326 aa15.29■□□□□ 0.04
CLCNKA-203ENST00000439316 SECISBP2Q96T21 854 aaKnown RBP15.29■□□□□ 0.04
CLCNKA-203ENST00000439316 MCHR1Q99705 422 aa15.29■□□□□ 0.04
CLCNKA-203ENST00000439316 HINT3Q9NQE9 182 aaKnown RBP15.29■□□□□ 0.04
CLCNKA-203ENST00000439316 APOBEC3BQ9UH17 382 aaKnown RBP15.29■□□□□ 0.04
CLCNKA-203ENST00000439316 KCNK6Q9Y257 313 aa15.29■□□□□ 0.04
CLCNKA-203ENST00000439316 PIAS3Q9Y6X2 628 aa15.29■□□□□ 0.04
CLCNKA-203ENST00000439316 PRR19A6NJB7 356 aa15.28■□□□□ 0.04
CLCNKA-203ENST00000439316 CD8B2A6NJW9 211 aa15.28■□□□□ 0.04
CLCNKA-203ENST00000439316 SOCS6O14544 535 aa15.28■□□□□ 0.04
CLCNKA-203ENST00000439316 LATO43561 262 aa15.28■□□□□ 0.04
CLCNKA-203ENST00000439316 SLC19A2O60779 497 aa15.28■□□□□ 0.04
CLCNKA-203ENST00000439316 SLC2A10O95528 541 aa15.28■□□□□ 0.04
CLCNKA-203ENST00000439316 EGFP01133 1207 aa15.28■□□□□ 0.04
CLCNKA-203ENST00000439316 HMGN1P05114 100 aa15.28■□□□□ 0.04
CLCNKA-203ENST00000439316 ASGR2P07307 311 aa15.28■□□□□ 0.04
CLCNKA-203ENST00000439316 CD8BP10966 210 aa15.28■□□□□ 0.04
CLCNKA-203ENST00000439316 ERP29P30040 261 aaKnown RBP15.28■□□□□ 0.04
CLCNKA-203ENST00000439316 PEBP1P30086 187 aaKnown RBP15.28■□□□□ 0.04
CLCNKA-203ENST00000439316 RAB8AP61006 207 aa15.28■□□□□ 0.04
CLCNKA-203ENST00000439316 LTB4RQ15722 352 aa15.28■□□□□ 0.04
CLCNKA-203ENST00000439316 PAMR1Q6UXH9 720 aa15.28■□□□□ 0.04
CLCNKA-203ENST00000439316 FRRS1Q6ZNA5 592 aa15.28■□□□□ 0.04
CLCNKA-203ENST00000439316 SIRT6Q8N6T7 355 aa15.28■□□□□ 0.04
CLCNKA-203ENST00000439316 YIPF7Q8N8F6 280 aa15.28■□□□□ 0.04
CLCNKA-203ENST00000439316 MFSD9Q8NBP5 474 aa15.28■□□□□ 0.04
CLCNKA-203ENST00000439316 SRFBP1Q8NEF9 429 aaKnown RBP15.28■□□□□ 0.04
CLCNKA-203ENST00000439316 OR2T33Q8NG76 320 aa15.28■□□□□ 0.04
CLCNKA-203ENST00000439316 GRPEL2Q8TAA5 225 aa15.28■□□□□ 0.04
CLCNKA-203ENST00000439316 ZFAND1Q8TCF1 268 aa15.28■□□□□ 0.04
CLCNKA-203ENST00000439316 GANCQ8TET4 914 aa15.28■□□□□ 0.04
CLCNKA-203ENST00000439316 UPRTQ96BW1 309 aa15.28■□□□□ 0.04
CLCNKA-203ENST00000439316 SLC35A4Q96G79 324 aa15.28■□□□□ 0.04
CLCNKA-203ENST00000439316 RSPH9Q9H1X1 276 aaPredicted RBP15.28■□□□□ 0.04
CLCNKA-203ENST00000439316 TNFRSF10DQ9UBN6 386 aa15.28■□□□□ 0.04
CLCNKA-203ENST00000439316 ZNF443Q9Y2A4 671 aaPredicted RBP15.28■□□□□ 0.04
CLCNKA-203ENST00000439316 CSNK1G3Q9Y6M4 447 aa15.28■□□□□ 0.04
CLCNKA-203ENST00000439316 C2orf92A0A1B0GVN3 265 aa15.27■□□□□ 0.04
CLCNKA-203ENST00000439316 GSAPA4D1B5 854 aa15.27■□□□□ 0.04
CLCNKA-203ENST00000439316 MID1O15344 667 aa15.27■□□□□ 0.04
CLCNKA-203ENST00000439316 FCMRO60667 390 aa15.27■□□□□ 0.04
CLCNKA-203ENST00000439316 PCDH8O95206 1070 aa15.27■□□□□ 0.04
CLCNKA-203ENST00000439316 NDUFV2P19404 249 aa15.27■□□□□ 0.04
CLCNKA-203ENST00000439316 SNAP47Q5SQN1 464 aa15.27■□□□□ 0.04
CLCNKA-203ENST00000439316 NRROSQ86YC3 692 aa15.27■□□□□ 0.04
CLCNKA-203ENST00000439316 KLBQ86Z14 1044 aa15.27■□□□□ 0.04
CLCNKA-203ENST00000439316 KAT2AQ92830 837 aa15.27■□□□□ 0.04
CLCNKA-203ENST00000439316 MARVELD1Q9BSK0 173 aa15.27■□□□□ 0.04
CLCNKA-203ENST00000439316 NIPAL2Q9H841 368 aa15.27■□□□□ 0.04
CLCNKA-203ENST00000439316 LYARQ9NX58 379 aaKnown RBP15.27■□□□□ 0.04
CLCNKA-203ENST00000439316 ZNF780BQ9Y6R6 833 aa15.27■□□□□ 0.04
CLCNKA-203ENST00000439316 FAM240BA0A1B0GVZ2 78 aa15.27■□□□□ 0.03
CLCNKA-203ENST00000439316 OR6C70A6NIJ9 312 aa15.27■□□□□ 0.03
CLCNKA-203ENST00000439316 GTPBP1O00178 669 aaKnown RBP15.27■□□□□ 0.03
CLCNKA-203ENST00000439316 SLC43A1O75387 559 aa15.27■□□□□ 0.03
CLCNKA-203ENST00000439316 RGS9O75916 674 aaPredicted RBP15.27■□□□□ 0.03
CLCNKA-203ENST00000439316 ALX3O95076 343 aa15.27■□□□□ 0.03
CLCNKA-203ENST00000439316 GALK2Q01415 458 aa15.27■□□□□ 0.03
CLCNKA-203ENST00000439316 FAPQ12884 760 aa15.27■□□□□ 0.03
CLCNKA-203ENST00000439316 CST6Q15828 149 aa15.27■□□□□ 0.03
CLCNKA-203ENST00000439316 FAM214AQ32MH5 1076 aa15.27■□□□□ 0.03
CLCNKA-203ENST00000439316 PUS10Q3MIT2 529 aaKnown RBP15.27■□□□□ 0.03
CLCNKA-203ENST00000439316 FAM111BQ6SJ93 734 aa15.27■□□□□ 0.03
CLCNKA-203ENST00000439316 ACOT12Q8WYK0 555 aa15.27■□□□□ 0.03
CLCNKA-203ENST00000439316 SAMD8Q96LT4 415 aa15.27■□□□□ 0.03
CLCNKA-203ENST00000439316 TRAF4Q9BUZ4 470 aaPredicted RBP15.27■□□□□ 0.03
CLCNKA-203ENST00000439316 GON7Q9BXV9 100 aa15.27■□□□□ 0.03
CLCNKA-203ENST00000439316 TRPV5Q9NQA5 729 aa15.27■□□□□ 0.03
CLCNKA-203ENST00000439316 PHPT1Q9NRX4 125 aaPredicted RBP15.27■□□□□ 0.03
CLCNKA-203ENST00000439316 NLGN3Q9NZ94 848 aa15.27■□□□□ 0.03
CLCNKA-203ENST00000439316 NLKQ9UBE8 527 aa15.27■□□□□ 0.03
CLCNKA-203ENST00000439316 CLCA3PQ9Y6N3 262 aa15.27■□□□□ 0.03
CLCNKA-203ENST00000439316 SNRNP200O75643 2136 aaKnown RBP15.27■□□□□ 0.03
CLCNKA-203ENST00000439316 OR52A4PA6NMU1 304 aa15.26■□□□□ 0.03
CLCNKA-203ENST00000439316 CDC42EP2O14613 210 aa15.26■□□□□ 0.03
CLCNKA-203ENST00000439316 RNF13O43567 381 aa15.26■□□□□ 0.03
CLCNKA-203ENST00000439316 PRKCAP17252 672 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms