RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 GALNT12Q8IXK2 581 aa12.95□□□□□ -0.34
HOXC4-202ENST00000430889 VWA5B2Q8N398 1253 aa12.95□□□□□ -0.34
HOXC4-202ENST00000430889 ARL14Q8N4G2 192 aa12.95□□□□□ -0.34
HOXC4-202ENST00000430889 TSTD1Q8NFU3 115 aa12.95□□□□□ -0.34
HOXC4-202ENST00000430889 BRIX1Q8TDN6 353 aaKnown RBP12.95□□□□□ -0.34
HOXC4-202ENST00000430889 RNFT2Q96EX2 444 aa12.95□□□□□ -0.34
HOXC4-202ENST00000430889 ZNF649Q9BS31 505 aa12.95□□□□□ -0.34
HOXC4-202ENST00000430889 PRRG3Q9BZD7 231 aa12.95□□□□□ -0.34
HOXC4-202ENST00000430889 EVA1AQ9H8M9 152 aa12.95□□□□□ -0.34
HOXC4-202ENST00000430889 CACYBPQ9HB71 228 aaKnown RBP12.95□□□□□ -0.34
HOXC4-202ENST00000430889 QPCTLQ9NXS2 382 aa12.95□□□□□ -0.34
HOXC4-202ENST00000430889 NLGN3Q9NZ94 848 aa12.95□□□□□ -0.34
HOXC4-202ENST00000430889 STUB1Q9UNE7 303 aa12.95□□□□□ -0.34
HOXC4-202ENST00000430889 CFL2Q9Y281 166 aa12.95□□□□□ -0.34
HOXC4-202ENST00000430889 GPR52Q9Y2T5 361 aa12.95□□□□□ -0.34
HOXC4-202ENST00000430889 A0A075B6Q4 140 aa12.94□□□□□ -0.34
HOXC4-202ENST00000430889 NPIPA5A0A0B4J1W7 369 aa12.94□□□□□ -0.34
HOXC4-202ENST00000430889 HYKKA2RU49 373 aa12.94□□□□□ -0.34
HOXC4-202ENST00000430889 FUOMA2VDF0 154 aa12.94□□□□□ -0.34
HOXC4-202ENST00000430889 SLC9B1P1A6NJY1 282 aa12.94□□□□□ -0.34
HOXC4-202ENST00000430889 NPIPA7E9PJI5 369 aa12.94□□□□□ -0.34
HOXC4-202ENST00000430889 SRPX2O60687 465 aaPredicted RBP12.94□□□□□ -0.34
HOXC4-202ENST00000430889 COQ9O75208 318 aa12.94□□□□□ -0.34
HOXC4-202ENST00000430889 SOX30O94993 753 aa12.94□□□□□ -0.34
HOXC4-202ENST00000430889 KCNK2O95069 426 aa12.94□□□□□ -0.34
HOXC4-202ENST00000430889 NPIPA8P0DM63 369 aa12.94□□□□□ -0.34
HOXC4-202ENST00000430889 DRD5P21918 477 aa12.94□□□□□ -0.34
HOXC4-202ENST00000430889 CDH3P22223 829 aa12.94□□□□□ -0.34
HOXC4-202ENST00000430889 CD27P26842 260 aa12.94□□□□□ -0.34
HOXC4-202ENST00000430889 GABRA3P34903 492 aa12.94□□□□□ -0.34
HOXC4-202ENST00000430889 EMDP50402 254 aa12.94□□□□□ -0.34
HOXC4-202ENST00000430889 PSG6Q00889 435 aa12.94□□□□□ -0.34
HOXC4-202ENST00000430889 TDGQ13569 410 aa12.94□□□□□ -0.34
HOXC4-202ENST00000430889 SLC30A6Q6NXT4 461 aa12.94□□□□□ -0.34
HOXC4-202ENST00000430889 RRM2BQ7LG56 351 aa12.94□□□□□ -0.34
HOXC4-202ENST00000430889 ZNF554Q86TJ5 538 aa12.94□□□□□ -0.34
HOXC4-202ENST00000430889 GRAMD2AQ8IUY3 354 aa12.94□□□□□ -0.34
HOXC4-202ENST00000430889 RNF113BQ8IZP6 322 aaKnown RBP12.94□□□□□ -0.34
HOXC4-202ENST00000430889 OR52R1Q8NGF1 315 aa12.94□□□□□ -0.34
HOXC4-202ENST00000430889 GPR151Q8TDV0 419 aa12.94□□□□□ -0.34
HOXC4-202ENST00000430889 TM9SF4Q92544 642 aa12.94□□□□□ -0.34
HOXC4-202ENST00000430889 JAM3Q9BX67 310 aa12.94□□□□□ -0.34
HOXC4-202ENST00000430889 RHBDL2Q9NX52 303 aa12.94□□□□□ -0.34
HOXC4-202ENST00000430889 EXOGQ9Y2C4 368 aaKnown RBP12.94□□□□□ -0.34
HOXC4-202ENST00000430889 CARD8Q9Y2G2 431 aa12.94□□□□□ -0.34
HOXC4-202ENST00000430889 SF3B6Q9Y3B4 125 aaKnown RBP12.94□□□□□ -0.34
HOXC4-202ENST00000430889 SPTBP11277 2137 aa12.93□□□□□ -0.34
HOXC4-202ENST00000430889 METTL12A8MUP2 240 aa12.93□□□□□ -0.34
HOXC4-202ENST00000430889 ZNF670-ZNF695F2Z2N8 137 aa12.93□□□□□ -0.34
HOXC4-202ENST00000430889 NPIPB9F8W1W9 429 aa12.93□□□□□ -0.34
HOXC4-202ENST00000430889 STK25O00506 426 aa12.93□□□□□ -0.34
HOXC4-202ENST00000430889 MYL12BO14950 172 aa12.93□□□□□ -0.34
HOXC4-202ENST00000430889 GKN3PP0CG01 181 aa12.93□□□□□ -0.34
HOXC4-202ENST00000430889 LIMS3P0CW19 117 aa12.93□□□□□ -0.34
HOXC4-202ENST00000430889 LIMS4P0CW20 117 aa12.93□□□□□ -0.34
HOXC4-202ENST00000430889 TBXA2RP21731 343 aa12.93□□□□□ -0.34
HOXC4-202ENST00000430889 MTNR1AP48039 350 aa12.93□□□□□ -0.34
HOXC4-202ENST00000430889 BCAP31P51572 246 aa12.93□□□□□ -0.34
HOXC4-202ENST00000430889 TPBGQ13641 420 aa12.93□□□□□ -0.34
HOXC4-202ENST00000430889 TMEM44Q2T9K0 475 aa12.93□□□□□ -0.34
HOXC4-202ENST00000430889 CLEC12AQ5QGZ9 265 aa12.93□□□□□ -0.34
HOXC4-202ENST00000430889 FIGNL1Q6PIW4 674 aa12.93□□□□□ -0.34
HOXC4-202ENST00000430889 CCDC190Q86UF4 302 aa12.93□□□□□ -0.34
HOXC4-202ENST00000430889 VSTM2LQ96N03 204 aa12.93□□□□□ -0.34
HOXC4-202ENST00000430889 MAP3K3Q99759 626 aa12.93□□□□□ -0.34
HOXC4-202ENST00000430889 BARHL1Q9BZE3 327 aa12.93□□□□□ -0.34
HOXC4-202ENST00000430889 TPSD1Q9BZJ3 242 aa12.93□□□□□ -0.34
HOXC4-202ENST00000430889 LMAN1LQ9HAT1 526 aa12.93□□□□□ -0.34
HOXC4-202ENST00000430889 FOLH1BQ9HBA9 442 aa12.93□□□□□ -0.34
HOXC4-202ENST00000430889 EXOSC1Q9Y3B2 195 aaKnown RBP12.93□□□□□ -0.34
HOXC4-202ENST00000430889 UGT2A1Q9Y4X1 527 aa12.93□□□□□ -0.34
HOXC4-202ENST00000430889 A0A0A6YYC8 382 aaPredicted RBP12.93□□□□□ -0.34
HOXC4-202ENST00000430889 BLACEA4D250 179 aa12.93□□□□□ -0.34
HOXC4-202ENST00000430889 SNTNA6NMZ2 147 aa12.93□□□□□ -0.34
HOXC4-202ENST00000430889 I3L1I5 382 aaPredicted RBP12.93□□□□□ -0.34
HOXC4-202ENST00000430889 WWP2O00308 870 aa12.93□□□□□ -0.34
HOXC4-202ENST00000430889 UPK1BO75841 260 aa12.93□□□□□ -0.34
HOXC4-202ENST00000430889 IGKV1D-16P01601 117 aa12.93□□□□□ -0.34
HOXC4-202ENST00000430889 IGHA1P01876 353 aa12.93□□□□□ -0.34
HOXC4-202ENST00000430889 RNH1P13489 461 aaKnown RBP12.93□□□□□ -0.34
HOXC4-202ENST00000430889 MAKP20794 623 aa12.93□□□□□ -0.34
HOXC4-202ENST00000430889 CTBP2P56545 445 aa12.93□□□□□ -0.34
HOXC4-202ENST00000430889 WNT4P56705 351 aa12.93□□□□□ -0.34
HOXC4-202ENST00000430889 ZNF45Q02386 682 aa12.93□□□□□ -0.34
HOXC4-202ENST00000430889 ZNF155Q12901 538 aaPredicted RBP12.93□□□□□ -0.34
HOXC4-202ENST00000430889 C1DQ13901 141 aaKnown RBP12.93□□□□□ -0.34
HOXC4-202ENST00000430889 FAM53BQ14153 422 aa12.93□□□□□ -0.34
HOXC4-202ENST00000430889 PERM1Q5SV97 790 aa12.93□□□□□ -0.34
HOXC4-202ENST00000430889 ZNF613Q6PF04 617 aa12.93□□□□□ -0.34
HOXC4-202ENST00000430889 TMEM239Q8WW34 195 aa12.93□□□□□ -0.34
HOXC4-202ENST00000430889 TCTN2Q96GX1 697 aa12.93□□□□□ -0.34
HOXC4-202ENST00000430889 SAMD8Q96LT4 415 aa12.93□□□□□ -0.34
HOXC4-202ENST00000430889 ZNF426Q9BUY5 554 aa12.93□□□□□ -0.34
HOXC4-202ENST00000430889 ASPNQ9BXN1 380 aa12.93□□□□□ -0.34
HOXC4-202ENST00000430889 C6orf62Q9GZU0 229 aaPredicted RBP12.93□□□□□ -0.34
HOXC4-202ENST00000430889 CHRNA10Q9GZZ6 450 aa12.93□□□□□ -0.34
HOXC4-202ENST00000430889 UBQLN3Q9H347 655 aa12.93□□□□□ -0.34
HOXC4-202ENST00000430889 PRO3102Q9H379 93 aa12.93□□□□□ -0.34
HOXC4-202ENST00000430889 C20orf141Q9NUB4 165 aa12.93□□□□□ -0.34
HOXC4-202ENST00000430889 DAPK2Q9UIK4 370 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms