RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 KLHDC3Q9BQ90 382 aa11.33□□□□□ -0.6
USP40-205ENST00000430158 ZNF703Q9H7S9 590 aaPredicted RBP11.33□□□□□ -0.6
USP40-205ENST00000430158 KAT8Q9H7Z6 458 aaKnown RBP11.33□□□□□ -0.6
USP40-205ENST00000430158 METTL7AQ9H8H3 244 aa11.33□□□□□ -0.6
USP40-205ENST00000430158 A4GALTQ9NPC4 353 aa11.33□□□□□ -0.6
USP40-205ENST00000430158 EXD2Q9NVH0 621 aa11.33□□□□□ -0.6
USP40-205ENST00000430158 ARL8BQ9NVJ2 186 aa11.33□□□□□ -0.6
USP40-205ENST00000430158 WIF1Q9Y5W5 379 aa11.33□□□□□ -0.6
USP40-205ENST00000430158 OIP5O43482 229 aa11.32□□□□□ -0.6
USP40-205ENST00000430158 UGT2B17O75795 530 aa11.32□□□□□ -0.6
USP40-205ENST00000430158 DCTN3O75935 186 aa11.32□□□□□ -0.6
USP40-205ENST00000430158 H6PDO95479 791 aa11.32□□□□□ -0.6
USP40-205ENST00000430158 IGHG3P01860 377 aa11.32□□□□□ -0.6
USP40-205ENST00000430158 CRYABP02511 175 aaKnown RBP11.32□□□□□ -0.6
USP40-205ENST00000430158 CELA3AP09093 270 aa11.32□□□□□ -0.6
USP40-205ENST00000430158 ARAFP10398 606 aa11.32□□□□□ -0.6
USP40-205ENST00000430158 DCTP40126 519 aa11.32□□□□□ -0.6
USP40-205ENST00000430158 CRATP43155 626 aa11.32□□□□□ -0.6
USP40-205ENST00000430158 ANXA11P50995 505 aaKnown RBP11.32□□□□□ -0.6
USP40-205ENST00000430158 PRSS12P56730 875 aa11.32□□□□□ -0.6
USP40-205ENST00000430158 MTPNP58546 118 aa11.32□□□□□ -0.6
USP40-205ENST00000430158 PPIAP62937 165 aaKnown RBP11.32□□□□□ -0.6
USP40-205ENST00000430158 KCNJ2P63252 427 aa11.32□□□□□ -0.6
USP40-205ENST00000430158 C19orf57Q0VDD7 668 aa11.32□□□□□ -0.6
USP40-205ENST00000430158 RABL3Q5HYI8 236 aa11.32□□□□□ -0.6
USP40-205ENST00000430158 FAM180AQ6UWF9 173 aa11.32□□□□□ -0.6
USP40-205ENST00000430158 ANGPTL8Q6UXH0 198 aa11.32□□□□□ -0.6
USP40-205ENST00000430158 BNC2Q6ZN30 1099 aaPredicted RBP11.32□□□□□ -0.6
USP40-205ENST00000430158 C16orf62Q7Z3J2 963 aa11.32□□□□□ -0.6
USP40-205ENST00000430158 FGD2Q7Z6J4 655 aa11.32□□□□□ -0.6
USP40-205ENST00000430158 FAM98AQ8NCA5 519 aaKnown RBP11.32□□□□□ -0.6
USP40-205ENST00000430158 CCDC197Q8NCU1 140 aa11.32□□□□□ -0.6
USP40-205ENST00000430158 OR8J3Q8NGG0 315 aa11.32□□□□□ -0.6
USP40-205ENST00000430158 PMM1Q92871 262 aa11.32□□□□□ -0.6
USP40-205ENST00000430158 MAL2Q969L2 176 aa11.32□□□□□ -0.6
USP40-205ENST00000430158 ZNF775Q96BV0 537 aaPredicted RBP11.32□□□□□ -0.6
USP40-205ENST00000430158 ZNF524Q96C55 264 aa11.32□□□□□ -0.6
USP40-205ENST00000430158 GNRHR2Q96P88 292 aa11.32□□□□□ -0.6
USP40-205ENST00000430158 LRRC37BQ96QE4 947 aa11.32□□□□□ -0.6
USP40-205ENST00000430158 HOXD1Q9GZZ0 328 aa11.32□□□□□ -0.6
USP40-205ENST00000430158 RAD21L1Q9H4I0 556 aa11.32□□□□□ -0.6
USP40-205ENST00000430158 TMEM38AQ9H6F2 299 aa11.32□□□□□ -0.6
USP40-205ENST00000430158 BCL2L10Q9HD36 194 aa11.32□□□□□ -0.6
USP40-205ENST00000430158 OLAHQ9NV23 265 aa11.32□□□□□ -0.6
USP40-205ENST00000430158 THUMPD1Q9NXG2 353 aaKnown RBP11.32□□□□□ -0.6
USP40-205ENST00000430158 KLRF1Q9NZS2 232 aa11.32□□□□□ -0.6
USP40-205ENST00000430158 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.32□□□□□ -0.6
USP40-205ENST00000430158 FBXL2Q9UKC9 423 aa11.32□□□□□ -0.6
USP40-205ENST00000430158 MKLN1Q9UL63 735 aa11.32□□□□□ -0.6
USP40-205ENST00000430158 C15orf41Q9Y2V0 281 aa11.32□□□□□ -0.6
USP40-205ENST00000430158 SPTAN1Q13813 2472 aaKnown RBP11.31□□□□□ -0.6
USP40-205ENST00000430158 GCN1Q92616 2671 aaKnown RBP11.31□□□□□ -0.6
USP40-205ENST00000430158 AGAP5A6NIR3 686 aa11.31□□□□□ -0.6
USP40-205ENST00000430158 FAM166BA8MTA8 275 aa11.31□□□□□ -0.6
USP40-205ENST00000430158 NPIPA5E9PKD4 350 aa11.31□□□□□ -0.6
USP40-205ENST00000430158 GNB5O14775 395 aa11.31□□□□□ -0.6
USP40-205ENST00000430158 SCO2O43819 266 aa11.31□□□□□ -0.6
USP40-205ENST00000430158 HS6ST1O60243 411 aa11.31□□□□□ -0.6
USP40-205ENST00000430158 DNAJA2O60884 412 aa11.31□□□□□ -0.6
USP40-205ENST00000430158 BCAS1O75363 584 aaPredicted RBP11.31□□□□□ -0.6
USP40-205ENST00000430158 GCM2O75603 506 aaPredicted RBP11.31□□□□□ -0.6
USP40-205ENST00000430158 CBX6O95503 412 aa11.31□□□□□ -0.6
USP40-205ENST00000430158 ANGPTL1O95841 491 aa11.31□□□□□ -0.6
USP40-205ENST00000430158 T-ENOLP0DO92 83 aa11.31□□□□□ -0.6
USP40-205ENST00000430158 ZNF24P17028 368 aa11.31□□□□□ -0.6
USP40-205ENST00000430158 ELAVL4P26378 380 aaKnown RBP11.31□□□□□ -0.6
USP40-205ENST00000430158 ADH7P40394 386 aa11.31□□□□□ -0.6
USP40-205ENST00000430158 ALDH6A1Q02252 535 aaKnown RBP11.31□□□□□ -0.6
USP40-205ENST00000430158 KRT72Q14CN4 511 aa11.31□□□□□ -0.6
USP40-205ENST00000430158 IGFBP7Q16270 282 aa11.31□□□□□ -0.6
USP40-205ENST00000430158 FLYWCH1Q4VC44 716 aa11.31□□□□□ -0.6
USP40-205ENST00000430158 ATAD3BQ5T9A4 648 aa11.31□□□□□ -0.6
USP40-205ENST00000430158 PRAMEF8Q5VWM4 474 aa11.31□□□□□ -0.6
USP40-205ENST00000430158 PRAMEF7Q5VXH5 474 aa11.31□□□□□ -0.6
USP40-205ENST00000430158 PLCZ1Q86YW0 608 aa11.31□□□□□ -0.6
USP40-205ENST00000430158 ZNF619Q8N2I2 560 aa11.31□□□□□ -0.6
USP40-205ENST00000430158 FAM109AQ8N4B1 249 aa11.31□□□□□ -0.6
USP40-205ENST00000430158 OR2M3Q8NG83 312 aa11.31□□□□□ -0.6
USP40-205ENST00000430158 FBXO27Q8NI29 283 aa11.31□□□□□ -0.6
USP40-205ENST00000430158 BCAS4Q8TDM0 211 aa11.31□□□□□ -0.6
USP40-205ENST00000430158 DUSP19Q8WTR2 217 aa11.31□□□□□ -0.6
USP40-205ENST00000430158 OIT3Q8WWZ8 545 aa11.31□□□□□ -0.6
USP40-205ENST00000430158 CMTM5Q96DZ9 223 aa11.31□□□□□ -0.6
USP40-205ENST00000430158 TMEM19Q96HH6 336 aa11.31□□□□□ -0.6
USP40-205ENST00000430158 ZNF597Q96LX8 424 aa11.31□□□□□ -0.6
USP40-205ENST00000430158 GPR137Q96N19 417 aa11.31□□□□□ -0.6
USP40-205ENST00000430158 ZNF583Q96ND8 569 aa11.31□□□□□ -0.6
USP40-205ENST00000430158 TREX2Q9BQ50 279 aaPredicted RBP11.31□□□□□ -0.6
USP40-205ENST00000430158 TSPAN10Q9H1Z9 355 aaPredicted RBP11.31□□□□□ -0.6
USP40-205ENST00000430158 ACKR4Q9NPB9 350 aa11.31□□□□□ -0.6
USP40-205ENST00000430158 CMTM6Q9NX76 183 aa11.31□□□□□ -0.6
USP40-205ENST00000430158 QPCTLQ9NXS2 382 aa11.31□□□□□ -0.6
USP40-205ENST00000430158 P2RX2Q9UBL9 471 aa11.31□□□□□ -0.6
USP40-205ENST00000430158 BOKQ9UMX3 212 aaPredicted RBP11.31□□□□□ -0.6
USP40-205ENST00000430158 NPIPA1Q9UND3 350 aa11.31□□□□□ -0.6
USP40-205ENST00000430158 CORO2BQ9UQ03 480 aa11.31□□□□□ -0.6
USP40-205ENST00000430158 WDR45Q9Y484 360 aa11.31□□□□□ -0.6
USP40-205ENST00000430158 CHST2Q9Y4C5 530 aa11.31□□□□□ -0.6
USP40-205ENST00000430158 DTNAQ9Y4J8 743 aa11.31□□□□□ -0.6
USP40-205ENST00000430158 LIPGQ9Y5X9 500 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms