RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 TMEM35AQ53FP2 167 aa8.32□□□□□ -1.08
CDC42BPA-206ENST00000429440 ELFN2Q5R3F8 820 aa8.32□□□□□ -1.08
CDC42BPA-206ENST00000429440 TMEM244Q5VVB8 128 aa8.32□□□□□ -1.08
CDC42BPA-206ENST00000429440 EEF1DP3Q658K8 133 aa8.32□□□□□ -1.08
CDC42BPA-206ENST00000429440 PRSS55Q6UWB4 352 aaPredicted RBP8.32□□□□□ -1.08
CDC42BPA-206ENST00000429440 ABHD13Q7L211 337 aa8.32□□□□□ -1.08
CDC42BPA-206ENST00000429440 CILP2Q8IUL8 1156 aa8.32□□□□□ -1.08
CDC42BPA-206ENST00000429440 TMEM192Q8IY95 271 aa8.32□□□□□ -1.08
CDC42BPA-206ENST00000429440 LRRC18Q8N456 261 aa8.32□□□□□ -1.08
CDC42BPA-206ENST00000429440 FBXO39Q8N4B4 442 aa8.32□□□□□ -1.08
CDC42BPA-206ENST00000429440 RNF149Q8NC42 400 aa8.32□□□□□ -1.08
CDC42BPA-206ENST00000429440 OR11G2Q8NGC1 345 aa8.32□□□□□ -1.08
CDC42BPA-206ENST00000429440 OR1S2Q8NGQ3 325 aa8.32□□□□□ -1.08
CDC42BPA-206ENST00000429440 OR2G2Q8NGZ5 317 aa8.32□□□□□ -1.08
CDC42BPA-206ENST00000429440 EXT2Q93063 718 aa8.32□□□□□ -1.08
CDC42BPA-206ENST00000429440 RGMAQ96B86 450 aa8.32□□□□□ -1.08
CDC42BPA-206ENST00000429440 TMEM176AQ96HP8 235 aa8.32□□□□□ -1.08
CDC42BPA-206ENST00000429440 NOL4LQ96MY1 436 aaPredicted RBP8.32□□□□□ -1.08
CDC42BPA-206ENST00000429440 ARHGAP9Q9BRR9 750 aa8.32□□□□□ -1.08
CDC42BPA-206ENST00000429440 MAGEB5Q9BZ81 275 aa8.32□□□□□ -1.08
CDC42BPA-206ENST00000429440 POPDC3Q9HBV1 291 aa8.32□□□□□ -1.08
CDC42BPA-206ENST00000429440 LHX9Q9NQ69 397 aa8.32□□□□□ -1.08
CDC42BPA-206ENST00000429440 C2orf42Q9NWW7 574 aa8.32□□□□□ -1.08
CDC42BPA-206ENST00000429440 TAS2R5Q9NYW4 299 aa8.32□□□□□ -1.08
CDC42BPA-206ENST00000429440 KLHL9Q9P2J3 617 aa8.32□□□□□ -1.08
CDC42BPA-206ENST00000429440 RBPJLQ9UBG7 517 aa8.32□□□□□ -1.08
CDC42BPA-206ENST00000429440 YARS2Q9Y2Z4 477 aaKnown RBP8.32□□□□□ -1.08
CDC42BPA-206ENST00000429440 CENPFP49454 3210 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 FXYD6-FXYD2A0A087WZ82 144 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 TMEM129A0AVI4 362 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 OR14I1A6ND48 311 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 NCF1BA6NI72 391 aaPredicted RBP8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 NCF1CA8MVU1 366 aaPredicted RBP8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 OR10H2O60403 315 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 KERAO60938 352 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 DDNO94850 711 aaPredicted RBP8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 HLA-DPB1P04440 258 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 CNR2P34972 360 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 SUCLG1P53597 346 aaKnown RBP8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 PNLIPRP2P54317 469 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 CARD18P57730 90 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 SKP1P63208 163 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 PRR5P85299 388 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 SHC2P98077 582 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 PITPNAQ00169 270 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 KLF9Q13886 244 aaPredicted RBP8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 VEZF1Q14119 521 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 OR4D1Q15615 310 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 MPPED2Q15777 294 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 NKAPLQ5M9Q1 402 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 NCEH1Q6PIU2 408 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 CLEC9AQ6UXN8 241 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 ZNF813Q6ZN06 617 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 ARIH2OSQ8N7S6 290 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 TEX19Q8NA77 164 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 UBAC2Q8NBM4 344 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 NETO2Q8NC67 525 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 NEIL3Q8TAT5 605 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 LCN9Q8WX39 176 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 TFGQ92734 400 aaPredicted RBP8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 SLC25A28Q96A46 364 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 FAM122AQ96E09 287 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 CAMK1GQ96NX5 476 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 OR52E6Q96RD3 313 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 NIPSNAP1Q9BPW8 284 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 UTP23Q9BRU9 249 aaKnown RBP8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 FICDQ9BVA6 458 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 ALG8Q9BVK2 526 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 FXYD6Q9H0Q3 95 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 OR51B6Q9H340 312 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 FZD8Q9H461 694 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 RERGLQ9H628 205 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 CLMPQ9H6B4 373 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 UQCC1Q9NVA1 299 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 TMEM184CQ9NVA4 438 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 SIX4Q9UIU6 781 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 OR10H1Q9Y4A9 318 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 CCDC163A0A0D9SF12 145 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 NAP1L6A6NFF2 107 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 A8MWP6 167 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 RAB36O95755 333 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 ZNF25P17030 456 aaPredicted RBP8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 S1PR1P21453 382 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 DRD5P21918 477 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 PRDX3P30048 256 aaKnown RBP8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 MAT2AP31153 395 aaKnown RBP8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 PPM1AP35813 382 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 GLP1RP43220 463 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 OMPP47874 163 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 MTNR1BP49286 362 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 MECP2P51608 486 aaKnown RBP8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 PRKXP51817 358 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 CRISP1P54107 249 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 CDKN2DP55273 166 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 FAM189BP81408 668 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 MRPS11P82912 194 aaKnown RBP8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 SURF2Q15527 256 aaPredicted RBP8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 NDUFAF6Q330K2 333 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 ZNF789Q5FWF6 425 aa8.31□□□□□ -1.08
CDC42BPA-206ENST00000429440 SPANXN4Q5MJ08 99 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms