RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 RND1Q92730 232 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 NEIL2Q969S2 332 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 UBXN10Q96LJ8 280 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 CLEC4MQ9H2X3 399 aaPredicted RBP6.77□□□□□ -1.33
CNOT4-206ENST00000428680 AKTIPQ9H8T0 292 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 TMEM45AQ9NWC5 275 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 PPP1R14DQ9NXH3 145 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 TAS2R7Q9NYW3 318 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 TICRRQ7Z2Z1 1910 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 A0A1W2PRQ8 180 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 CCL21O00585 134 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 C1orf105O95561 183 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 PNMTP11086 282 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 RFC3P40938 356 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 ALDH3A2P51648 485 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 TPTEP56180 551 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 HERV-K104P61576 105 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 KCNC4Q03721 635 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 SCRN3Q0VDG4 424 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 EXOSC7Q15024 291 aaKnown RBP6.77□□□□□ -1.33
CNOT4-206ENST00000428680 ADRM1Q16186 407 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 CES4AQ5XG92 561 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 CPEB2Q7Z5Q1 589 aaKnown RBP6.77□□□□□ -1.33
CNOT4-206ENST00000428680 LAPTM4BQ86VI4 370 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 MISPQ8IVT2 679 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 CNTD1Q8N815 330 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 OR5M9Q8NGP3 310 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 ENKURQ8TC29 256 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 WFDC5Q8TCV5 224 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 DNAJA4Q8WW22 397 aaPredicted RBP6.77□□□□□ -1.33
CNOT4-206ENST00000428680 HOXB13Q92826 284 aaPredicted RBP6.77□□□□□ -1.33
CNOT4-206ENST00000428680 SECISBP2Q96T21 854 aaKnown RBP6.77□□□□□ -1.33
CNOT4-206ENST00000428680 MICU1Q9BPX6 476 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 LRRC61Q9BV99 259 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 PINK1Q9BXM7 581 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 HMG20AQ9NP66 347 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 PARD6AQ9NPB6 346 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 KCNS2Q9ULS6 477 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 A0A1W2PQ09 198 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 TCRBV7S3A2A0A539 114 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 MED19A0JLT2 244 aaPredicted RBP6.77□□□□□ -1.33
CNOT4-206ENST00000428680 H3BSH0 61 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 SOCS2O14508 198 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 EIF1BO60739 113 aaKnown RBP6.77□□□□□ -1.33
CNOT4-206ENST00000428680 MT-ND1P03886 318 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 TGM1P22735 817 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 EDNRAP25101 427 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 BCL6P41182 706 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 DAP3P51398 398 aaKnown RBP6.77□□□□□ -1.33
CNOT4-206ENST00000428680 FOLH1Q04609 750 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 FAPQ12884 760 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 KCNJ11Q14654 390 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 ELAVL1Q15717 326 aaKnown RBP6.77□□□□□ -1.33
CNOT4-206ENST00000428680 KLHL22Q53GT1 634 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 VWA5B1Q5TIE3 1220 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 OR2A2Q6IF42 318 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 GRHL2Q6ISB3 625 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 BEND4Q6ZU67 534 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 YRDCQ86U90 279 aaKnown RBP6.77□□□□□ -1.33
CNOT4-206ENST00000428680 IGFN1Q86VF2 1251 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 SLC35F3Q8IY50 421 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 LAS2Q8IYD9 372 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 RHEBL1Q8TAI7 183 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 NDNFQ8TB73 568 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 H1FXQ92522 213 aaKnown RBP6.77□□□□□ -1.33
CNOT4-206ENST00000428680 TMEM68Q96MH6 324 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 SLC46A1Q96NT5 459 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 CGREF1Q99674 301 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 ZNF559Q9BR84 538 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 LHPPQ9H008 270 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 ZNF355PQ9NSJ1 428 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 PAQR5Q9NXK6 330 aaPredicted RBP6.77□□□□□ -1.33
CNOT4-206ENST00000428680 INTS6Q9UL03 887 aaKnown RBP6.77□□□□□ -1.33
CNOT4-206ENST00000428680 LAMA3Q16787 3333 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 COL5A1P20908 1838 aaPredicted RBP6.77□□□□□ -1.33
CNOT4-206ENST00000428680 PTPRQQ9UMZ3 2332 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 LILRA5A6NI73 299 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 K7EQS6 105 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 DLGAP3O95886 979 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 HTR1AP08908 422 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 TGFBR2P37173 567 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 PBX1P40424 430 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 ARPC4P59998 168 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 FADDQ13158 208 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 RBM39Q14498 530 aaKnown RBP6.77□□□□□ -1.33
CNOT4-206ENST00000428680 TMEM64Q6YI46 380 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 HMGN2P46Q86SG4 172 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 AMER2Q8N7J2 671 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 MVB12AQ96EY5 273 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 MPP4Q96JB8 637 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 LIN28AQ9H9Z2 209 aaKnown RBP6.77□□□□□ -1.33
CNOT4-206ENST00000428680 TNFRSF10DQ9UBN6 386 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 IL20RAQ9UHF4 553 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 DAPK2Q9UIK4 370 aa6.77□□□□□ -1.33
CNOT4-206ENST00000428680 A0A087WUU8 490 aa6.76□□□□□ -1.33
CNOT4-206ENST00000428680 GXYLT2A0PJZ3 443 aa6.76□□□□□ -1.33
CNOT4-206ENST00000428680 PRAMEF25A6NGN4 478 aa6.76□□□□□ -1.33
CNOT4-206ENST00000428680 RGS10O43665 173 aa6.76□□□□□ -1.33
CNOT4-206ENST00000428680 UGT2B11O75310 529 aa6.76□□□□□ -1.33
CNOT4-206ENST00000428680 KRT36O76013 467 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms