RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 GRAMD2AQ8IUY3 354 aa10.08□□□□□ -0.8
ATP2C1-204ENST00000428331 ZNF433Q8N7K0 673 aaPredicted RBP10.08□□□□□ -0.8
ATP2C1-204ENST00000428331 SFXN5Q8TD22 340 aa10.08□□□□□ -0.8
ATP2C1-204ENST00000428331 OR8D1Q8WZ84 308 aa10.08□□□□□ -0.8
ATP2C1-204ENST00000428331 SCLYQ96I15 445 aa10.08□□□□□ -0.8
ATP2C1-204ENST00000428331 SOSTQ9BQB4 213 aa10.08□□□□□ -0.8
ATP2C1-204ENST00000428331 MTG2Q9H4K7 406 aa10.08□□□□□ -0.8
ATP2C1-204ENST00000428331 INPP5EQ9NRR6 644 aa10.08□□□□□ -0.8
ATP2C1-204ENST00000428331 ABRACLQ9P1F3 81 aa10.08□□□□□ -0.8
ATP2C1-204ENST00000428331 WDR45Q9Y484 360 aa10.08□□□□□ -0.8
ATP2C1-204ENST00000428331 NPFFR2Q9Y5X5 522 aa10.08□□□□□ -0.8
ATP2C1-204ENST00000428331 A0A1W2PPL8 197 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 SURF4O15260 269 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 OLFM2O95897 454 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 C8AP07357 584 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 MRPL3P09001 348 aaKnown RBP10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 DECR1Q16698 335 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 TMEM35AQ53FP2 167 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 PLA1AQ53H76 456 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 CCSAPQ6IQ19 270 aaPredicted RBP10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 FAM122CQ6P4D5 195 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 C11orf88Q6PI97 169 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 TECPR1Q7Z6L1 1165 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 TMCO2Q7Z6W1 182 aaPredicted RBP10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 VRK2Q86Y07 508 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 SNX33Q8WV41 574 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 MYLIPQ8WY64 445 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 GPA33Q99795 319 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 AIFM2Q9BRQ8 373 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 METTL17Q9H7H0 456 aaPredicted RBP10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 IL21Q9HBE4 155 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 HINT3Q9NQE9 182 aaKnown RBP10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 CUEDC1Q9NWM3 386 aaPredicted RBP10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 IRAK3Q9Y616 596 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 C7orf66A4D0T2 115 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 ECDO95905 644 aaPredicted RBP10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 CHRM4P08173 479 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 PTNP21246 168 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 ACSM1Q08AH1 577 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 FNDC3BQ53EP0 1204 aaKnown RBP10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 AADACL4Q5VUY2 407 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 METTL11BQ5VVY1 283 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 SFRP4Q6FHJ7 346 aaPredicted RBP10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 SLC25A25Q6KCM7 469 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 BTN2A1Q7KYR7 527 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 RASGRP3Q8IV61 690 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 ZNF614Q8N883 585 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 OR2L2Q8NH16 312 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 ABHD4Q8TB40 342 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 RBPMSQ93062 196 aaKnown RBP10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 UBL7Q96S82 380 aaPredicted RBP10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 PITHD1Q9GZP4 211 aaPredicted RBP10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 TMEM168Q9H0V1 697 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 LINC00597Q9H2U6 94 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 SPHK2Q9NRA0 654 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 SIRT3Q9NTG7 399 aaPredicted RBP10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 MGAT4CQ9UBM8 478 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 TMPRSS11DO60235 418 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 ZNF3P17036 446 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 PTGER1P34995 402 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 PCBP4P57723 403 aaKnown RBP10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 ACTC1P68032 377 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 ACTA1P68133 377 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 LGALS3BPQ08380 585 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 NUMA1Q14980 2115 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 PRSS53Q2L4Q9 553 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 PRAMEF8Q5VWM4 474 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 PRAMEF7Q5VXH5 474 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 FAM198BQ6UWH4 519 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 UBE2Q1Q7Z7E8 422 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 TMEM150AQ86TG1 271 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 OR8D4Q8NGM9 314 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 SCMH1Q96GD3 660 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 C1QTNF2Q9BXJ5 285 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 RHBGQ9H310 441 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 SEMA4GQ9NTN9 838 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 EVA1BQ9NVM1 165 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 MT-ND4P03905 459 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 GAAP10253 952 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 CD53P19397 219 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 CCR6P51684 374 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 PSMA6P60900 246 aaKnown RBP10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 LSM11P83369 360 aaKnown RBP eCLIP10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 FAM69AQ5T7M9 428 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 RPL13AP3Q6NVV1 102 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 C3P1Q6ZMU1 363 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 OR52D1Q9H346 318 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 C12orf10Q9HB07 376 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 TDP1Q9NUW8 608 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 OR6C2Q9NZP2 312 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 MED11Q9P086 117 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 EMC3Q9P0I2 261 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 GPR34Q9UPC5 381 aa10.07□□□□□ -0.8
ATP2C1-204ENST00000428331 A0A1W2PPK0 400 aa10.06□□□□□ -0.8
ATP2C1-204ENST00000428331 ZNF879B4DU55 563 aa10.06□□□□□ -0.8
ATP2C1-204ENST00000428331 SEMA7AO75326 666 aa10.06□□□□□ -0.8
ATP2C1-204ENST00000428331 CLEC3AO75596 197 aa10.06□□□□□ -0.8
ATP2C1-204ENST00000428331 TFP02787 698 aa10.06□□□□□ -0.8
ATP2C1-204ENST00000428331 UBL4AP11441 157 aa10.06□□□□□ -0.8
ATP2C1-204ENST00000428331 FAUP35544 74 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms