RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 LKAAEAR1Q8TD35 194 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 TAAR9Q96RI9 348 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 BARD1Q99728 777 aaKnown RBP9.99□□□□□ -0.81
TCOF1-204ENST00000427724 IFT27Q9BW83 186 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 ASPNQ9BXN1 380 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 DUX4Q9UBX2 424 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 RBM7Q9Y580 266 aaKnown RBP9.99□□□□□ -0.81
TCOF1-204ENST00000427724 PTPRQQ9UMZ3 2332 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 A0A1W2PRG6 482 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 PRR33A8MZF0 331 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 SULT1C4O75897 302 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 FARS2O95363 451 aaKnown RBP9.99□□□□□ -0.81
TCOF1-204ENST00000427724 PTTG1O95997 202 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 IL7P13232 177 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 SPINK2P20155 84 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 PIGAP37287 484 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 GABARAPL2P60520 117 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 GPR85P60893 370 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 VWA2Q5GFL6 755 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 TMEM64Q6YI46 380 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 AQP11Q8NBQ7 271 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 OR6Q1Q8NGQ2 317 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 OR2AJ1Q8NGZ0 328 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 HMGCLL1Q8TB92 370 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 SGCDQ92629 289 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 FEVQ99581 238 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 WDR77Q9BQA1 342 aaPredicted RBP9.99□□□□□ -0.81
TCOF1-204ENST00000427724 CLEC4AQ9UMR7 237 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 MRPS2Q9Y399 296 aaKnown RBP9.99□□□□□ -0.81
TCOF1-204ENST00000427724 PCSK2P16519 638 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 MYL9P24844 172 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 CASP3P42574 277 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 CHRNEQ04844 493 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 CCSMST1Q4G0I0 132 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 RUNDC3AQ59EK9 446 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 FAM199XQ6PEV8 388 aaPredicted RBP9.99□□□□□ -0.81
TCOF1-204ENST00000427724 ZNF419Q96HQ0 510 aaPredicted RBP9.99□□□□□ -0.81
TCOF1-204ENST00000427724 TRIB3Q96RU7 358 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 ZNF160Q9HCG1 818 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 VSTM2BA6NLU5 285 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 PRAMEF2O60811 474 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 B3GALT4O96024 378 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 DRD2P14416 443 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 TACR1P25103 407 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 DRD3P35462 400 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 DPTQ07507 201 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 MEIOBQ8N635 442 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 OR4C6Q8NH72 309 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 ZNF671Q8TAW3 534 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 CREB3L4Q8TEY5 395 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 SNAPC3Q92966 411 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 ACPTQ9BZG2 426 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 SPHK1Q9NYA1 384 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 BOKQ9UMX3 212 aaPredicted RBP9.99□□□□□ -0.81
TCOF1-204ENST00000427724 POFUT2Q9Y2G5 429 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 MED31Q9Y3C7 131 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 PCDHGB6Q9Y5F9 930 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 ANTXRLA6NF34 631 aa9.98□□□□□ -0.81
TCOF1-204ENST00000427724 IDSB3KWA1 339 aa9.98□□□□□ -0.81
TCOF1-204ENST00000427724 SLITRK5O94991 958 aa9.98□□□□□ -0.81
TCOF1-204ENST00000427724 DHFRP00374 187 aa9.98□□□□□ -0.81
TCOF1-204ENST00000427724 NAT1P18440 290 aa9.98□□□□□ -0.81
TCOF1-204ENST00000427724 GADD45AP24522 165 aa9.98□□□□□ -0.81
TCOF1-204ENST00000427724 CRB2Q5IJ48 1285 aa9.98□□□□□ -0.81
TCOF1-204ENST00000427724 AGAP6Q5VW22 663 aa9.98□□□□□ -0.81
TCOF1-204ENST00000427724 CARD17Q5XLA6 110 aa9.98□□□□□ -0.81
TCOF1-204ENST00000427724 GRAMD2AQ8IUY3 354 aa9.98□□□□□ -0.81
TCOF1-204ENST00000427724 CELF2-AS1Q8N7Q2 184 aa9.98□□□□□ -0.81
TCOF1-204ENST00000427724 RHOXF1Q8NHV9 184 aa9.98□□□□□ -0.81
TCOF1-204ENST00000427724 ZNF675Q8TD23 568 aa9.98□□□□□ -0.81
TCOF1-204ENST00000427724 CCDC120Q96HB5 630 aa9.98□□□□□ -0.81
TCOF1-204ENST00000427724 AGAP4Q96P64 663 aa9.98□□□□□ -0.81
TCOF1-204ENST00000427724 DNAJC27Q9NZQ0 273 aa9.98□□□□□ -0.81
TCOF1-204ENST00000427724 ABCG2Q9UNQ0 655 aa9.98□□□□□ -0.81
TCOF1-204ENST00000427724 TRABD2BA6NFA1 517 aa9.98□□□□□ -0.81
TCOF1-204ENST00000427724 OR7A17O14581 309 aa9.98□□□□□ -0.81
TCOF1-204ENST00000427724 HYAL3O43820 417 aaPredicted RBP9.98□□□□□ -0.81
TCOF1-204ENST00000427724 SDC1P18827 310 aa9.98□□□□□ -0.81
TCOF1-204ENST00000427724 ENDOUP21128 410 aaKnown RBP9.98□□□□□ -0.81
TCOF1-204ENST00000427724 CLDN6P56747 220 aa9.98□□□□□ -0.81
TCOF1-204ENST00000427724 EXOSC7Q15024 291 aaKnown RBP9.98□□□□□ -0.81
TCOF1-204ENST00000427724 STEAP3Q658P3 488 aa9.98□□□□□ -0.81
TCOF1-204ENST00000427724 C11orf88Q6PI97 169 aa9.98□□□□□ -0.81
TCOF1-204ENST00000427724 C19orf48Q6RUI8 117 aa9.98□□□□□ -0.81
TCOF1-204ENST00000427724 PTRH1Q86Y79 214 aaKnown RBP9.98□□□□□ -0.81
TCOF1-204ENST00000427724 OR5H6Q8NGV6 325 aa9.98□□□□□ -0.81
TCOF1-204ENST00000427724 STT3BQ8TCJ2 826 aa9.98□□□□□ -0.81
TCOF1-204ENST00000427724 BMFQ96LC9 184 aa9.98□□□□□ -0.81
TCOF1-204ENST00000427724 COQ10AQ96MF6 247 aa9.98□□□□□ -0.81
TCOF1-204ENST00000427724 RBP7Q96R05 134 aa9.98□□□□□ -0.81
TCOF1-204ENST00000427724 GPER1Q99527 375 aa9.98□□□□□ -0.81
TCOF1-204ENST00000427724 DUSP15Q9H1R2 295 aaPredicted RBP9.98□□□□□ -0.81
TCOF1-204ENST00000427724 GORASP2Q9H8Y8 452 aa9.98□□□□□ -0.81
TCOF1-204ENST00000427724 BAIAP2Q9UQB8 552 aa9.98□□□□□ -0.81
TCOF1-204ENST00000427724 A0A1B0GTQ1 180 aa9.98□□□□□ -0.81
TCOF1-204ENST00000427724 RIIAD1A6NNX1 92 aa9.98□□□□□ -0.81
TCOF1-204ENST00000427724 M0R129 80 aa9.98□□□□□ -0.81
TCOF1-204ENST00000427724 ORC5O43913 435 aa9.98□□□□□ -0.81
TCOF1-204ENST00000427724 FTH1P19P0C7X4 201 aa9.98□□□□□ -0.81
TCOF1-204ENST00000427724 ETFAP13804 333 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms