RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 SLC46A1Q96NT5 459 aa24.6■■□□□ 1.53
SH3GL3-202ENST00000427482 VN1R1Q9GZP7 353 aa24.6■■□□□ 1.53
SH3GL3-202ENST00000427482 CCNB1IP1Q9NPC3 277 aa24.6■■□□□ 1.53
SH3GL3-202ENST00000427482 SLC22A11Q9NSA0 550 aa24.6■■□□□ 1.53
SH3GL3-202ENST00000427482 CTSFQ9UBX1 484 aa24.6■■□□□ 1.53
SH3GL3-202ENST00000427482 RARRES3Q9UL19 164 aa24.6■■□□□ 1.53
SH3GL3-202ENST00000427482 CLCA3PQ9Y6N3 262 aa24.6■■□□□ 1.53
SH3GL3-202ENST00000427482 H3BN98 237 aa24.59■■□□□ 1.53
SH3GL3-202ENST00000427482 NTN1O95631 604 aa24.59■■□□□ 1.53
SH3GL3-202ENST00000427482 DDAH2O95865 285 aa24.59■■□□□ 1.53
SH3GL3-202ENST00000427482 IGKV3-11P04433 115 aa24.59■■□□□ 1.53
SH3GL3-202ENST00000427482 PRICKLE2Q7Z3G6 844 aa24.59■■□□□ 1.53
SH3GL3-202ENST00000427482 GRAMD2AQ8IUY3 354 aa24.59■■□□□ 1.53
SH3GL3-202ENST00000427482 SLC2A12Q8TD20 617 aa24.59■■□□□ 1.53
SH3GL3-202ENST00000427482 IPCEF1Q8WWN9 437 aaPredicted RBP24.59■■□□□ 1.53
SH3GL3-202ENST00000427482 RHNO1Q9BSD3 238 aa24.59■■□□□ 1.53
SH3GL3-202ENST00000427482 OR8D2Q9GZM6 311 aa24.59■■□□□ 1.53
SH3GL3-202ENST00000427482 TGIF2Q9GZN2 237 aa24.59■■□□□ 1.53
SH3GL3-202ENST00000427482 SLC7A7Q9UM01 511 aa24.59■■□□□ 1.53
SH3GL3-202ENST00000427482 PCDHGB1Q9Y5G3 927 aa24.59■■□□□ 1.53
SH3GL3-202ENST00000427482 TRAPPC13A5PLN9 417 aa24.58■■□□□ 1.53
SH3GL3-202ENST00000427482 M0R129 80 aa24.58■■□□□ 1.53
SH3GL3-202ENST00000427482 MPZL2O60487 215 aa24.58■■□□□ 1.53
SH3GL3-202ENST00000427482 MRPS14O60783 128 aaKnown RBP24.58■■□□□ 1.53
SH3GL3-202ENST00000427482 TIAF1O95411 115 aa24.58■■□□□ 1.53
SH3GL3-202ENST00000427482 PCMT1P22061 227 aa24.58■■□□□ 1.53
SH3GL3-202ENST00000427482 RORAP35398 523 aa24.58■■□□□ 1.53
SH3GL3-202ENST00000427482 PSMD4P55036 377 aaKnown RBP24.58■■□□□ 1.53
SH3GL3-202ENST00000427482 NSDHLQ15738 373 aa24.58■■□□□ 1.53
SH3GL3-202ENST00000427482 CPEB4Q17RY0 729 aaKnown RBP eCLIP24.58■■□□□ 1.53
SH3GL3-202ENST00000427482 C12orf73Q69YU5 71 aa24.58■■□□□ 1.53
SH3GL3-202ENST00000427482 PRSS58Q8IYP2 241 aa24.58■■□□□ 1.53
SH3GL3-202ENST00000427482 PIGXQ8TBF5 258 aa24.58■■□□□ 1.53
SH3GL3-202ENST00000427482 ZNF721Q8TF20 911 aa24.58■■□□□ 1.53
SH3GL3-202ENST00000427482 CNOT9Q92600 299 aaKnown RBP24.58■■□□□ 1.53
SH3GL3-202ENST00000427482 RNF31Q96EP0 1072 aa24.58■■□□□ 1.53
SH3GL3-202ENST00000427482 GFM1Q96RP9 751 aaKnown RBP24.58■■□□□ 1.53
SH3GL3-202ENST00000427482 MYCBPQ99417 103 aaPredicted RBP24.58■■□□□ 1.53
SH3GL3-202ENST00000427482 TSC22D3Q99576 134 aa24.58■■□□□ 1.53
SH3GL3-202ENST00000427482 CCDC90BQ9GZT6 254 aa24.58■■□□□ 1.53
SH3GL3-202ENST00000427482 SMOC1Q9H4F8 434 aa24.58■■□□□ 1.53
SH3GL3-202ENST00000427482 C11orf16Q9NQ32 467 aa24.58■■□□□ 1.53
SH3GL3-202ENST00000427482 RSL24D1Q9UHA3 163 aaKnown RBP24.58■■□□□ 1.53
SH3GL3-202ENST00000427482 MKL2Q9ULH7 1088 aa24.58■■□□□ 1.53
SH3GL3-202ENST00000427482 OMPP47874 163 aa24.58■■□□□ 1.53
SH3GL3-202ENST00000427482 OR1Q1Q15612 314 aa24.58■■□□□ 1.53
SH3GL3-202ENST00000427482 RRM2BQ7LG56 351 aa24.58■■□□□ 1.53
SH3GL3-202ENST00000427482 LAPTM4BQ86VI4 370 aa24.58■■□□□ 1.53
SH3GL3-202ENST00000427482 SLITRK4Q8IW52 837 aa24.58■■□□□ 1.53
SH3GL3-202ENST00000427482 ZNF614Q8N883 585 aa24.58■■□□□ 1.53
SH3GL3-202ENST00000427482 SLC38A9Q8NBW4 561 aa24.58■■□□□ 1.53
SH3GL3-202ENST00000427482 NMD3Q96D46 503 aaKnown RBP24.58■■□□□ 1.53
SH3GL3-202ENST00000427482 CLIP3Q96DZ5 547 aa24.58■■□□□ 1.53
SH3GL3-202ENST00000427482 ST6GALNAC1Q9NSC7 600 aaPredicted RBP24.58■■□□□ 1.53
SH3GL3-202ENST00000427482 C14orf105Q9NVL8 296 aa24.58■■□□□ 1.53
SH3GL3-202ENST00000427482 CFL2Q9Y281 166 aa24.58■■□□□ 1.53
SH3GL3-202ENST00000427482 MUC3AQ02505 3323 aa24.58■■□□□ 1.52
SH3GL3-202ENST00000427482 IGLV3-12A0A075B6K2 115 aa24.57■■□□□ 1.52
SH3GL3-202ENST00000427482 AGRPO00253 132 aa24.57■■□□□ 1.52
SH3GL3-202ENST00000427482 SCRG1O75711 98 aa24.57■■□□□ 1.52
SH3GL3-202ENST00000427482 GSTT1P30711 240 aa24.57■■□□□ 1.52
SH3GL3-202ENST00000427482 ATP12AP54707 1039 aa24.57■■□□□ 1.52
SH3GL3-202ENST00000427482 TSPAN31Q12999 210 aa24.57■■□□□ 1.52
SH3GL3-202ENST00000427482 FGFBP1Q14512 234 aa24.57■■□□□ 1.52
SH3GL3-202ENST00000427482 ANGPT1Q15389 498 aa24.57■■□□□ 1.52
SH3GL3-202ENST00000427482 PWWP2BQ6NUJ5 590 aa24.57■■□□□ 1.52
SH3GL3-202ENST00000427482 PRR23CQ6ZRP0 262 aa24.57■■□□□ 1.52
SH3GL3-202ENST00000427482 MBOAT2Q6ZWT7 520 aa24.57■■□□□ 1.52
SH3GL3-202ENST00000427482 PLPP5Q8NEB5 264 aa24.57■■□□□ 1.52
SH3GL3-202ENST00000427482 OR13F1Q8NGS4 319 aa24.57■■□□□ 1.52
SH3GL3-202ENST00000427482 OR14A16Q8NHC5 309 aa24.57■■□□□ 1.52
SH3GL3-202ENST00000427482 TMEM255BQ8WV15 326 aa24.57■■□□□ 1.52
SH3GL3-202ENST00000427482 PRSS27Q9BQR3 290 aa24.57■■□□□ 1.52
SH3GL3-202ENST00000427482 RGS10O43665 173 aa24.56■■□□□ 1.52
SH3GL3-202ENST00000427482 ITIH1P19827 911 aa24.56■■□□□ 1.52
SH3GL3-202ENST00000427482 PPICP45877 212 aa24.56■■□□□ 1.52
SH3GL3-202ENST00000427482 ZSWIM7Q19AV6 140 aa24.56■■□□□ 1.52
SH3GL3-202ENST00000427482 PHF19Q5T6S3 580 aa24.56■■□□□ 1.52
SH3GL3-202ENST00000427482 GTF2IRD2BQ6EKJ0 949 aa24.56■■□□□ 1.52
SH3GL3-202ENST00000427482 GTF2IRD2Q86UP8 949 aa24.56■■□□□ 1.52
SH3GL3-202ENST00000427482 CLVS1Q8IUQ0 354 aaPredicted RBP24.56■■□□□ 1.52
SH3GL3-202ENST00000427482 SIGLEC11Q96RL6 698 aa24.56■■□□□ 1.52
SH3GL3-202ENST00000427482 ZNF559Q9BR84 538 aa24.56■■□□□ 1.52
SH3GL3-202ENST00000427482 DNAJB12Q9NXW2 375 aaKnown RBP24.56■■□□□ 1.52
SH3GL3-202ENST00000427482 PSORS1C1Q9UIG5 152 aa24.56■■□□□ 1.52
SH3GL3-202ENST00000427482 BDP1A6H8Y1 2624 aa24.56■■□□□ 1.52
SH3GL3-202ENST00000427482 D6RAR5 112 aa24.56■■□□□ 1.52
SH3GL3-202ENST00000427482 NTN3O00634 580 aaPredicted RBP24.56■■□□□ 1.52
SH3GL3-202ENST00000427482 SEC14L2O76054 403 aa24.56■■□□□ 1.52
SH3GL3-202ENST00000427482 LYPD3O95274 346 aa24.56■■□□□ 1.52
SH3GL3-202ENST00000427482 MPLP40238 635 aa24.56■■□□□ 1.52
SH3GL3-202ENST00000427482 PTCHD4Q6ZW05 846 aa24.56■■□□□ 1.52
SH3GL3-202ENST00000427482 MEX3DQ86XN8 651 aaKnown RBP24.56■■□□□ 1.52
SH3GL3-202ENST00000427482 KIF18BQ86Y91 864 aa24.56■■□□□ 1.52
SH3GL3-202ENST00000427482 DAZLQ92904 295 aaKnown RBP24.56■■□□□ 1.52
SH3GL3-202ENST00000427482 SLC35B4Q969S0 331 aa24.56■■□□□ 1.52
SH3GL3-202ENST00000427482 MUL1Q969V5 352 aa24.56■■□□□ 1.52
SH3GL3-202ENST00000427482 FAM46AQ96IP4 442 aaKnown RBP24.56■■□□□ 1.52
SH3GL3-202ENST00000427482 ART5Q96L15 291 aa24.56■■□□□ 1.52
SH3GL3-202ENST00000427482 COMMD3-BMI1R4GMX3 469 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms