RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 ZNF528Q3MIS6 628 aa24.51■■□□□ 1.51
LDB1-202ENST00000425280 SLX4IPQ5VYV7 408 aa24.51■■□□□ 1.51
LDB1-202ENST00000425280 LAPTM4BQ86VI4 370 aa24.51■■□□□ 1.51
LDB1-202ENST00000425280 GNPDA2Q8TDQ7 276 aa24.51■■□□□ 1.51
LDB1-202ENST00000425280 CNOT9Q92600 299 aaKnown RBP24.51■■□□□ 1.51
LDB1-202ENST00000425280 SLC7A5P2Q9GIP4 190 aa24.51■■□□□ 1.51
LDB1-202ENST00000425280 POLR2J2Q9GZM3 115 aaKnown RBP24.51■■□□□ 1.51
LDB1-202ENST00000425280 VN1R1Q9GZP7 353 aa24.51■■□□□ 1.51
LDB1-202ENST00000425280 PLCXD1Q9NUJ7 323 aa24.51■■□□□ 1.51
LDB1-202ENST00000425280 PCDHGA10Q9Y5H3 936 aa24.51■■□□□ 1.51
LDB1-202ENST00000425280 CLCA3PQ9Y6N3 262 aa24.51■■□□□ 1.51
LDB1-202ENST00000425280 NPIPB9F8W1W9 429 aa24.5■■□□□ 1.51
LDB1-202ENST00000425280 TIAF1O95411 115 aa24.5■■□□□ 1.51
LDB1-202ENST00000425280 DDAH2O95865 285 aa24.5■■□□□ 1.51
LDB1-202ENST00000425280 TTKP33981 857 aa24.5■■□□□ 1.51
LDB1-202ENST00000425280 IFNGR2P38484 337 aa24.5■■□□□ 1.51
LDB1-202ENST00000425280 ELAVL1Q15717 326 aaKnown RBP24.5■■□□□ 1.51
LDB1-202ENST00000425280 ZNF141Q15928 474 aa24.5■■□□□ 1.51
LDB1-202ENST00000425280 PRR23CQ6ZRP0 262 aa24.5■■□□□ 1.51
LDB1-202ENST00000425280 ZNF614Q8N883 585 aa24.5■■□□□ 1.51
LDB1-202ENST00000425280 SLC38A9Q8NBW4 561 aa24.5■■□□□ 1.51
LDB1-202ENST00000425280 OR8D2Q9GZM6 311 aa24.5■■□□□ 1.51
LDB1-202ENST00000425280 TRAPPC13A5PLN9 417 aa24.5■■□□□ 1.51
LDB1-202ENST00000425280 DYRK3O43781 588 aa24.5■■□□□ 1.51
LDB1-202ENST00000425280 FMO6PO60774 539 aa24.5■■□□□ 1.51
LDB1-202ENST00000425280 GSTM3P21266 225 aa24.5■■□□□ 1.51
LDB1-202ENST00000425280 OR1Q1Q15612 314 aa24.5■■□□□ 1.51
LDB1-202ENST00000425280 NSDHLQ15738 373 aa24.5■■□□□ 1.51
LDB1-202ENST00000425280 CLVS1Q8IUQ0 354 aaPredicted RBP24.5■■□□□ 1.51
LDB1-202ENST00000425280 TOR1AIP2Q8NFQ8 470 aa24.5■■□□□ 1.51
LDB1-202ENST00000425280 OR13F1Q8NGS4 319 aa24.5■■□□□ 1.51
LDB1-202ENST00000425280 SLC2A12Q8TD20 617 aa24.5■■□□□ 1.51
LDB1-202ENST00000425280 TMEM255BQ8WV15 326 aa24.5■■□□□ 1.51
LDB1-202ENST00000425280 IPCEF1Q8WWN9 437 aaPredicted RBP24.5■■□□□ 1.51
LDB1-202ENST00000425280 MKL2Q9ULH7 1088 aa24.5■■□□□ 1.51
LDB1-202ENST00000425280 IGKV3-11P04433 115 aa24.49■■□□□ 1.51
LDB1-202ENST00000425280 OMPP47874 163 aa24.49■■□□□ 1.51
LDB1-202ENST00000425280 C12orf73Q69YU5 71 aa24.49■■□□□ 1.51
LDB1-202ENST00000425280 GTF2IRD2BQ6EKJ0 949 aa24.49■■□□□ 1.51
LDB1-202ENST00000425280 RRM2BQ7LG56 351 aa24.49■■□□□ 1.51
LDB1-202ENST00000425280 GTF2IRD2Q86UP8 949 aa24.49■■□□□ 1.51
LDB1-202ENST00000425280 PIGXQ8TBF5 258 aa24.49■■□□□ 1.51
LDB1-202ENST00000425280 ZNF721Q8TF20 911 aa24.49■■□□□ 1.51
LDB1-202ENST00000425280 SLC46A1Q96NT5 459 aa24.49■■□□□ 1.51
LDB1-202ENST00000425280 CCNB1IP1Q9NPC3 277 aa24.49■■□□□ 1.51
LDB1-202ENST00000425280 SIDT1Q9NXL6 827 aaKnown RBP24.49■■□□□ 1.51
LDB1-202ENST00000425280 TESQ9UGI8 421 aaKnown RBP24.49■■□□□ 1.51
LDB1-202ENST00000425280 RARRES3Q9UL19 164 aa24.49■■□□□ 1.51
LDB1-202ENST00000425280 PCDHGB1Q9Y5G3 927 aa24.49■■□□□ 1.51
LDB1-202ENST00000425280 RGS10O43665 173 aa24.49■■□□□ 1.51
LDB1-202ENST00000425280 PRKNO60260 465 aaPredicted RBP24.49■■□□□ 1.51
LDB1-202ENST00000425280 C7orf57Q8NEG2 295 aa24.49■■□□□ 1.51
LDB1-202ENST00000425280 FAM46AQ96IP4 442 aaKnown RBP24.49■■□□□ 1.51
LDB1-202ENST00000425280 PRSS27Q9BQR3 290 aa24.49■■□□□ 1.51
LDB1-202ENST00000425280 LHPPQ9H008 270 aa24.49■■□□□ 1.51
LDB1-202ENST00000425280 EVA1AQ9H8M9 152 aa24.49■■□□□ 1.51
LDB1-202ENST00000425280 SEC14L2O76054 403 aa24.48■■□□□ 1.51
LDB1-202ENST00000425280 LYPD3O95274 346 aa24.48■■□□□ 1.51
LDB1-202ENST00000425280 MT-ND2P03891 347 aa24.48■■□□□ 1.51
LDB1-202ENST00000425280 EMX1Q04741 257 aaPredicted RBP24.48■■□□□ 1.51
LDB1-202ENST00000425280 PWWP2BQ6NUJ5 590 aa24.48■■□□□ 1.51
LDB1-202ENST00000425280 PTCHD4Q6ZW05 846 aa24.48■■□□□ 1.51
LDB1-202ENST00000425280 MBOAT2Q6ZWT7 520 aa24.48■■□□□ 1.51
LDB1-202ENST00000425280 AHSA2Q719I0 299 aa24.48■■□□□ 1.51
LDB1-202ENST00000425280 KIF18BQ86Y91 864 aa24.48■■□□□ 1.51
LDB1-202ENST00000425280 GRAMD2AQ8IUY3 354 aa24.48■■□□□ 1.51
LDB1-202ENST00000425280 MUL1Q969V5 352 aa24.48■■□□□ 1.51
LDB1-202ENST00000425280 SIGLEC11Q96RL6 698 aa24.48■■□□□ 1.51
LDB1-202ENST00000425280 GFM1Q96RP9 751 aaKnown RBP24.48■■□□□ 1.51
LDB1-202ENST00000425280 ST6GALNAC1Q9NSC7 600 aaPredicted RBP24.48■■□□□ 1.51
LDB1-202ENST00000425280 DNAJB12Q9NXW2 375 aaKnown RBP24.48■■□□□ 1.51
LDB1-202ENST00000425280 CNIH4Q9P003 139 aa24.48■■□□□ 1.51
LDB1-202ENST00000425280 PSORS1C1Q9UIG5 152 aa24.48■■□□□ 1.51
LDB1-202ENST00000425280 COMMD3-BMI1R4GMX3 469 aa24.48■■□□□ 1.51
LDB1-202ENST00000425280 VPS13AQ96RL7 3174 aa24.48■■□□□ 1.51
LDB1-202ENST00000425280 MPZL2O60487 215 aa24.47■■□□□ 1.51
LDB1-202ENST00000425280 ITIH1P19827 911 aa24.47■■□□□ 1.51
LDB1-202ENST00000425280 RORAP35398 523 aa24.47■■□□□ 1.51
LDB1-202ENST00000425280 DUSP3P51452 185 aaPredicted RBP24.47■■□□□ 1.51
LDB1-202ENST00000425280 ATP12AP54707 1039 aa24.47■■□□□ 1.51
LDB1-202ENST00000425280 TSPAN31Q12999 210 aa24.47■■□□□ 1.51
LDB1-202ENST00000425280 CPEB4Q17RY0 729 aaKnown RBP eCLIP24.47■■□□□ 1.517e-7■■□□□ 13.3
LDB1-202ENST00000425280 ARSGQ96EG1 525 aa24.47■■□□□ 1.51
LDB1-202ENST00000425280 LMF1Q96S06 567 aa24.47■■□□□ 1.51
LDB1-202ENST00000425280 TGIF2Q9GZN2 237 aa24.47■■□□□ 1.51
LDB1-202ENST00000425280 AMBNQ9NP70 447 aa24.47■■□□□ 1.51
LDB1-202ENST00000425280 NCOR1O75376 2440 aa24.47■■□□□ 1.51
LDB1-202ENST00000425280 SPEGQ15772 3267 aa24.47■■□□□ 1.51
LDB1-202ENST00000425280 PIP5K1CO60331 668 aa24.47■■□□□ 1.51
LDB1-202ENST00000425280 MRPS14O60783 128 aaKnown RBP24.47■■□□□ 1.51
LDB1-202ENST00000425280 SCRG1O75711 98 aa24.47■■□□□ 1.51
LDB1-202ENST00000425280 PPICP45877 212 aa24.47■■□□□ 1.51
LDB1-202ENST00000425280 NUDT6P53370 316 aa24.47■■□□□ 1.51
LDB1-202ENST00000425280 PSMD4P55036 377 aaKnown RBP24.47■■□□□ 1.51
LDB1-202ENST00000425280 FGFBP1Q14512 234 aa24.47■■□□□ 1.51
LDB1-202ENST00000425280 PHF19Q5T6S3 580 aa24.47■■□□□ 1.51
LDB1-202ENST00000425280 SLITRK4Q8IW52 837 aa24.47■■□□□ 1.51
LDB1-202ENST00000425280 NRMQ8IXM6 262 aa24.47■■□□□ 1.51
LDB1-202ENST00000425280 IQCF1Q8N6M8 205 aa24.47■■□□□ 1.51
LDB1-202ENST00000425280 NUDT9Q9BW91 350 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms