RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 BEX1Q9HBH7 125 aa12.44□□□□□ -0.42
MCF2L-213ENST00000421756 SLC25A19Q9HC21 320 aa12.44□□□□□ -0.42
MCF2L-213ENST00000421756 WBP11Q9Y2W2 641 aaKnown RBP12.44□□□□□ -0.42
MCF2L-213ENST00000421756 A0A1W2PQF6 199 aa12.44□□□□□ -0.42
MCF2L-213ENST00000421756 SLC30A4O14863 429 aa12.44□□□□□ -0.42
MCF2L-213ENST00000421756 UBXN7O94888 489 aa12.44□□□□□ -0.42
MCF2L-213ENST00000421756 BMP7P18075 431 aa12.44□□□□□ -0.42
MCF2L-213ENST00000421756 ILF3Q12906 894 aaKnown RBP eCLIP12.44□□□□□ -0.421e-6■■■■□ 19.7
MCF2L-213ENST00000421756 TMEM64Q6YI46 380 aa12.44□□□□□ -0.42
MCF2L-213ENST00000421756 ZNF836Q6ZNA1 936 aa12.44□□□□□ -0.42
MCF2L-213ENST00000421756 DGAT2L6Q6ZPD8 337 aa12.44□□□□□ -0.42
MCF2L-213ENST00000421756 KCTD7Q96MP8 289 aa12.44□□□□□ -0.42
MCF2L-213ENST00000421756 WACQ9BTA9 647 aa12.44□□□□□ -0.42
MCF2L-213ENST00000421756 C1QTNF7Q9BXJ2 289 aa12.44□□□□□ -0.42
MCF2L-213ENST00000421756 FKBP14Q9NWM8 211 aa12.44□□□□□ -0.42
MCF2L-213ENST00000421756 ACTR10Q9NZ32 417 aa12.44□□□□□ -0.42
MCF2L-213ENST00000421756 NUFIP1Q9UHK0 495 aaKnown RBP12.44□□□□□ -0.42
MCF2L-213ENST00000421756 ZNF346Q9UL40 294 aaKnown RBP12.44□□□□□ -0.42
MCF2L-213ENST00000421756 PRRC2CQ9Y520 2896 aaKnown RBP12.44□□□□□ -0.42
MCF2L-213ENST00000421756 A0A0B4J203 849 aa12.44□□□□□ -0.42
MCF2L-213ENST00000421756 SLITRK5O94991 958 aa12.44□□□□□ -0.42
MCF2L-213ENST00000421756 PAHP00439 452 aa12.44□□□□□ -0.42
MCF2L-213ENST00000421756 PSKH1P11801 424 aa12.44□□□□□ -0.42
MCF2L-213ENST00000421756 MAGEB1P43366 347 aa12.44□□□□□ -0.42
MCF2L-213ENST00000421756 ANXA11P50995 505 aaKnown RBP12.44□□□□□ -0.42
MCF2L-213ENST00000421756 WNT4P56705 351 aa12.44□□□□□ -0.42
MCF2L-213ENST00000421756 LARS2Q15031 903 aaKnown RBP12.44□□□□□ -0.42
MCF2L-213ENST00000421756 PRAMEF17Q5VTA0 474 aa12.44□□□□□ -0.42
MCF2L-213ENST00000421756 LYPD4Q6UWN0 246 aa12.44□□□□□ -0.42
MCF2L-213ENST00000421756 WDR88Q6ZMY6 472 aa12.44□□□□□ -0.42
MCF2L-213ENST00000421756 TTLQ8NG68 377 aa12.44□□□□□ -0.42
MCF2L-213ENST00000421756 SDHCQ99643 169 aaPredicted RBP12.44□□□□□ -0.42
MCF2L-213ENST00000421756 FAM60AQ9NP50 221 aa12.44□□□□□ -0.42
MCF2L-213ENST00000421756 CRNNQ9UBG3 495 aaPredicted RBP12.44□□□□□ -0.42
MCF2L-213ENST00000421756 NDOR1Q9UHB4 597 aa12.44□□□□□ -0.42
MCF2L-213ENST00000421756 RWDD3Q9Y3V2 267 aa12.44□□□□□ -0.42
MCF2L-213ENST00000421756 CACNA1EQ15878 2313 aa12.43□□□□□ -0.42
MCF2L-213ENST00000421756 FREM2Q5SZK8 3169 aa12.43□□□□□ -0.42
MCF2L-213ENST00000421756 A0A1W2PRG6 482 aa12.43□□□□□ -0.42
MCF2L-213ENST00000421756 GSTT2P0CG29 244 aa12.43□□□□□ -0.42
MCF2L-213ENST00000421756 GSTT2BP0CG30 244 aa12.43□□□□□ -0.42
MCF2L-213ENST00000421756 MYF5P13349 255 aa12.43□□□□□ -0.42
MCF2L-213ENST00000421756 CTHP32929 405 aa12.43□□□□□ -0.42
MCF2L-213ENST00000421756 CTBP2P56545 445 aa12.43□□□□□ -0.42
MCF2L-213ENST00000421756 HYAL1Q12794 435 aa12.43□□□□□ -0.42
MCF2L-213ENST00000421756 MFSD12Q6NUT3 480 aa12.43□□□□□ -0.42
MCF2L-213ENST00000421756 SLC36A4Q6YBV0 504 aa12.43□□□□□ -0.42
MCF2L-213ENST00000421756 SIRT6Q8N6T7 355 aa12.43□□□□□ -0.42
MCF2L-213ENST00000421756 NEIL3Q8TAT5 605 aa12.43□□□□□ -0.42
MCF2L-213ENST00000421756 UFD1Q92890 307 aa12.43□□□□□ -0.42
MCF2L-213ENST00000421756 WDR92Q96MX6 357 aa12.43□□□□□ -0.42
MCF2L-213ENST00000421756 FOXN4Q96NZ1 517 aa12.43□□□□□ -0.42
MCF2L-213ENST00000421756 HDHD2Q9H0R4 259 aa12.43□□□□□ -0.42
MCF2L-213ENST00000421756 C2orf42Q9NWW7 574 aa12.43□□□□□ -0.42
MCF2L-213ENST00000421756 CNOT2Q9NZN8 540 aaKnown RBP12.43□□□□□ -0.42
MCF2L-213ENST00000421756 TNFRSF10DQ9UBN6 386 aa12.43□□□□□ -0.42
MCF2L-213ENST00000421756 SLC17A4Q9Y2C5 497 aa12.43□□□□□ -0.42
MCF2L-213ENST00000421756 KLK4Q9Y5K2 254 aa12.43□□□□□ -0.42
MCF2L-213ENST00000421756 ZNF106Q9H2Y7 1883 aaKnown RBP12.43□□□□□ -0.42
MCF2L-213ENST00000421756 A0A0G2JPF8 293 aa12.43□□□□□ -0.42
MCF2L-213ENST00000421756 HNRNPCL2B2RXH8 293 aa12.43□□□□□ -0.42
MCF2L-213ENST00000421756 HNRNPCL3B7ZW38 293 aa12.43□□□□□ -0.42
MCF2L-213ENST00000421756 ALOX5P09917 674 aa12.43□□□□□ -0.42
MCF2L-213ENST00000421756 HNRNPCL4P0DMR1 293 aa12.43□□□□□ -0.42
MCF2L-213ENST00000421756 IL7P13232 177 aa12.43□□□□□ -0.42
MCF2L-213ENST00000421756 ALAS2P22557 587 aa12.43□□□□□ -0.42
MCF2L-213ENST00000421756 TMEM35AQ53FP2 167 aa12.43□□□□□ -0.42
MCF2L-213ENST00000421756 AGAP7PQ5VUJ5 663 aa12.43□□□□□ -0.42
MCF2L-213ENST00000421756 C12orf73Q69YU5 71 aa12.43□□□□□ -0.42
MCF2L-213ENST00000421756 FRRS1Q6ZNA5 592 aa12.43□□□□□ -0.42
MCF2L-213ENST00000421756 TMEM99Q8N816 258 aa12.43□□□□□ -0.42
MCF2L-213ENST00000421756 OR4K13Q8NH42 304 aa12.43□□□□□ -0.42
MCF2L-213ENST00000421756 SEC14L4Q9UDX3 406 aa12.43□□□□□ -0.42
MCF2L-213ENST00000421756 ZNF443Q9Y2A4 671 aaPredicted RBP12.43□□□□□ -0.42
MCF2L-213ENST00000421756 CMAHPQ9Y471 501 aa12.43□□□□□ -0.42
MCF2L-213ENST00000421756 A0A1B0GVT2 93 aa12.43□□□□□ -0.42
MCF2L-213ENST00000421756 CDC14CA4D256 554 aa12.43□□□□□ -0.42
MCF2L-213ENST00000421756 ANKRD61A6NGH8 418 aa12.43□□□□□ -0.42
MCF2L-213ENST00000421756 SMLR1H3BR10 107 aa12.43□□□□□ -0.42
MCF2L-213ENST00000421756 PPP1R3DO95685 299 aa12.43□□□□□ -0.42
MCF2L-213ENST00000421756 ACP2P11117 423 aa12.43□□□□□ -0.42
MCF2L-213ENST00000421756 MAKP20794 623 aa12.43□□□□□ -0.42
MCF2L-213ENST00000421756 TBXA2RP21731 343 aa12.43□□□□□ -0.42
MCF2L-213ENST00000421756 TPMTP51580 245 aa12.43□□□□□ -0.42
MCF2L-213ENST00000421756 SRP54P61011 504 aaKnown RBP12.43□□□□□ -0.42
MCF2L-213ENST00000421756 RACK1P63244 317 aaKnown RBP12.43□□□□□ -0.42
MCF2L-213ENST00000421756 ZNF45Q02386 682 aa12.43□□□□□ -0.42
MCF2L-213ENST00000421756 ZNF267Q14586 743 aaPredicted RBP12.43□□□□□ -0.42
MCF2L-213ENST00000421756 SUZ12Q15022 739 aaKnown RBP12.43□□□□□ -0.42
MCF2L-213ENST00000421756 THSD4Q6ZMP0 1018 aa12.43□□□□□ -0.42
MCF2L-213ENST00000421756 KRT74Q7RTS7 529 aa12.43□□□□□ -0.42
MCF2L-213ENST00000421756 TMEM163Q8TC26 289 aa12.43□□□□□ -0.42
MCF2L-213ENST00000421756 CNOT9Q92600 299 aaKnown RBP12.43□□□□□ -0.42
MCF2L-213ENST00000421756 OR52D1Q9H346 318 aa12.43□□□□□ -0.42
MCF2L-213ENST00000421756 EVA1BQ9NVM1 165 aa12.43□□□□□ -0.42
MCF2L-213ENST00000421756 KLF15Q9UIH9 416 aa12.43□□□□□ -0.42
MCF2L-213ENST00000421756 SHISA3A0PJX4 238 aa12.42□□□□□ -0.42
MCF2L-213ENST00000421756 OXSR1O95747 527 aaPredicted RBP12.42□□□□□ -0.42
MCF2L-213ENST00000421756 LIMS3P0CW19 117 aa12.42□□□□□ -0.42
MCF2L-213ENST00000421756 LIMS4P0CW20 117 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms