RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 TBXA2RP21731 343 aa9.94□□□□□ -0.82
SSBP3-206ENST00000420121 KIR2DL2P43627 348 aaPredicted RBP9.94□□□□□ -0.82
SSBP3-206ENST00000420121 ART1P52961 327 aa9.94□□□□□ -0.82
SSBP3-206ENST00000420121 PSMD4P55036 377 aaKnown RBP9.94□□□□□ -0.82
SSBP3-206ENST00000420121 DIO3P55073 304 aa9.94□□□□□ -0.82
SSBP3-206ENST00000420121 IFFO1Q0D2I5 559 aa9.94□□□□□ -0.82
SSBP3-206ENST00000420121 C17orf67Q0P5P2 114 aa9.94□□□□□ -0.82
SSBP3-206ENST00000420121 CD226Q15762 336 aa9.94□□□□□ -0.82
SSBP3-206ENST00000420121 VPS26BQ4G0F5 336 aa9.94□□□□□ -0.82
SSBP3-206ENST00000420121 TNFAIP8L3Q5GJ75 292 aa9.94□□□□□ -0.82
SSBP3-206ENST00000420121 CCNJQ5T5M9 372 aa9.94□□□□□ -0.82
SSBP3-206ENST00000420121 VWA1Q6PCB0 445 aa9.94□□□□□ -0.82
SSBP3-206ENST00000420121 ZCCHC12Q6PEW1 402 aa9.94□□□□□ -0.82
SSBP3-206ENST00000420121 FIGNL1Q6PIW4 674 aa9.94□□□□□ -0.82
SSBP3-206ENST00000420121 LRIG3Q6UXM1 1119 aa9.94□□□□□ -0.82
SSBP3-206ENST00000420121 R3HCC1LQ7Z5L2 792 aaKnown RBP9.94□□□□□ -0.82
SSBP3-206ENST00000420121 KIF18BQ86Y91 864 aa9.94□□□□□ -0.82
SSBP3-206ENST00000420121 KRTCAP2Q8N6L1 136 aa9.94□□□□□ -0.82
SSBP3-206ENST00000420121 METTL25Q8N6Q8 603 aa9.94□□□□□ -0.82
SSBP3-206ENST00000420121 COQ8BQ96D53 544 aa9.94□□□□□ -0.82
SSBP3-206ENST00000420121 DTNBP1Q96EV8 351 aa9.94□□□□□ -0.82
SSBP3-206ENST00000420121 LRRC46Q96FV0 321 aa9.94□□□□□ -0.82
SSBP3-206ENST00000420121 ZNF845Q96IR2 970 aaPredicted RBP9.94□□□□□ -0.82
SSBP3-206ENST00000420121 ADGRG7Q96K78 797 aa9.94□□□□□ -0.82
SSBP3-206ENST00000420121 YIPF4Q9BSR8 244 aa9.94□□□□□ -0.82
SSBP3-206ENST00000420121 TBL1XR1Q9BZK7 514 aa9.94□□□□□ -0.82
SSBP3-206ENST00000420121 C20orf27Q9GZN8 174 aa9.94□□□□□ -0.82
SSBP3-206ENST00000420121 CXorf36Q9H7Y0 433 aa9.94□□□□□ -0.82
SSBP3-206ENST00000420121 RNF122Q9H9V4 155 aa9.94□□□□□ -0.82
SSBP3-206ENST00000420121 CCM2LQ9NUG4 571 aaPredicted RBP9.94□□□□□ -0.82
SSBP3-206ENST00000420121 GPATCH2Q9NW75 528 aa9.94□□□□□ -0.82
SSBP3-206ENST00000420121 ST6GALNAC2Q9UJ37 374 aa9.94□□□□□ -0.82
SSBP3-206ENST00000420121 PACSIN3Q9UKS6 424 aa9.94□□□□□ -0.82
SSBP3-206ENST00000420121 PRR14LQ5THK1 2151 aa9.94□□□□□ -0.82
SSBP3-206ENST00000420121 FREM1Q5H8C1 2179 aa9.93□□□□□ -0.82
SSBP3-206ENST00000420121 A0A1W2PRB8 838 aa9.93□□□□□ -0.82
SSBP3-206ENST00000420121 SLC22A20A6NK97 555 aa9.93□□□□□ -0.82
SSBP3-206ENST00000420121 TMEM114B3SHH9 223 aa9.93□□□□□ -0.82
SSBP3-206ENST00000420121 H3BML4 177 aa9.93□□□□□ -0.82
SSBP3-206ENST00000420121 LINC01387J3KSC0 135 aa9.93□□□□□ -0.82
SSBP3-206ENST00000420121 MSTNO14793 375 aa9.93□□□□□ -0.82
SSBP3-206ENST00000420121 SEC14L5O43304 696 aa9.93□□□□□ -0.82
SSBP3-206ENST00000420121 GMFGO60234 142 aa9.93□□□□□ -0.82
SSBP3-206ENST00000420121 TNFRSF21O75509 655 aa9.93□□□□□ -0.82
SSBP3-206ENST00000420121 HRGP04196 525 aa9.93□□□□□ -0.82
SSBP3-206ENST00000420121 CRHP06850 196 aa9.93□□□□□ -0.82
SSBP3-206ENST00000420121 CCKARP32238 428 aa9.93□□□□□ -0.82
SSBP3-206ENST00000420121 HPCAL1P37235 193 aa9.93□□□□□ -0.82
SSBP3-206ENST00000420121 SERPINB4P48594 390 aa9.93□□□□□ -0.82
SSBP3-206ENST00000420121 PRSS12P56730 875 aa9.93□□□□□ -0.82
SSBP3-206ENST00000420121 C21orf58P58505 322 aa9.93□□□□□ -0.82
SSBP3-206ENST00000420121 MPP2Q14168 576 aa9.93□□□□□ -0.82
SSBP3-206ENST00000420121 LASP1Q14847 261 aaKnown RBP9.93□□□□□ -0.82
SSBP3-206ENST00000420121 CTU2Q2VPK5 515 aaKnown RBP9.93□□□□□ -0.82
SSBP3-206ENST00000420121 ATP6AP1LQ52LC2 224 aa9.93□□□□□ -0.82
SSBP3-206ENST00000420121 IL23RQ5VWK5 629 aa9.93□□□□□ -0.82
SSBP3-206ENST00000420121 ZNF474Q6S9Z5 364 aaPredicted RBP9.93□□□□□ -0.82
SSBP3-206ENST00000420121 SZRD1Q7Z422 152 aa9.93□□□□□ -0.82
SSBP3-206ENST00000420121 BTLAQ7Z6A9 289 aa9.93□□□□□ -0.82
SSBP3-206ENST00000420121 MEIOBQ8N635 442 aa9.93□□□□□ -0.82
SSBP3-206ENST00000420121 GATSQ8NAP1 163 aa9.93□□□□□ -0.82
SSBP3-206ENST00000420121 GOT1L1Q8NHS2 421 aaPredicted RBP9.93□□□□□ -0.82
SSBP3-206ENST00000420121 FNDC9Q8TBE3 224 aa9.93□□□□□ -0.82
SSBP3-206ENST00000420121 POC1BQ8TC44 478 aa9.93□□□□□ -0.82
SSBP3-206ENST00000420121 CDS1Q92903 461 aa9.93□□□□□ -0.82
SSBP3-206ENST00000420121 NINJ1Q92982 152 aa9.93□□□□□ -0.82
SSBP3-206ENST00000420121 STACQ99469 402 aa9.93□□□□□ -0.82
SSBP3-206ENST00000420121 FOXC2Q99958 501 aa9.93□□□□□ -0.82
SSBP3-206ENST00000420121 PIGQQ9BRB3 760 aa9.93□□□□□ -0.82
SSBP3-206ENST00000420121 PINK1Q9BXM7 581 aa9.93□□□□□ -0.82
SSBP3-206ENST00000420121 ACBD3Q9H3P7 528 aa9.93□□□□□ -0.82
SSBP3-206ENST00000420121 PIGMQ9H3S5 423 aa9.93□□□□□ -0.82
SSBP3-206ENST00000420121 PTGES2Q9H7Z7 377 aa9.93□□□□□ -0.82
SSBP3-206ENST00000420121 PLEKHF2Q9H8W4 249 aa9.93□□□□□ -0.82
SSBP3-206ENST00000420121 DUSP22Q9NRW4 184 aa9.93□□□□□ -0.82
SSBP3-206ENST00000420121 ZCCHC3Q9NUD5 404 aaKnown RBP9.93□□□□□ -0.82
SSBP3-206ENST00000420121 ZNF175Q9Y473 711 aa9.93□□□□□ -0.82
SSBP3-206ENST00000420121 KCNE3Q9Y6H6 103 aa9.93□□□□□ -0.82
SSBP3-206ENST00000420121 A0A1W2PQD3 144 aa9.92□□□□□ -0.82
SSBP3-206ENST00000420121 C7orf72A4D263 438 aa9.92□□□□□ -0.82
SSBP3-206ENST00000420121 NPIPB9F8W1W9 429 aa9.92□□□□□ -0.82
SSBP3-206ENST00000420121 SIAH2O43255 324 aa9.92□□□□□ -0.82
SSBP3-206ENST00000420121 OIP5O43482 229 aa9.92□□□□□ -0.82
SSBP3-206ENST00000420121 NDUFB5O43674 189 aa9.92□□□□□ -0.82
SSBP3-206ENST00000420121 ZNF500O60304 480 aaPredicted RBP9.92□□□□□ -0.82
SSBP3-206ENST00000420121 AQP8O94778 261 aa9.92□□□□□ -0.82
SSBP3-206ENST00000420121 C6orf47O95873 294 aa9.92□□□□□ -0.82
SSBP3-206ENST00000420121 ALOX5P09917 674 aa9.92□□□□□ -0.82
SSBP3-206ENST00000420121 G6PDP11413 515 aa9.92□□□□□ -0.82
SSBP3-206ENST00000420121 NID1P14543 1247 aa9.92□□□□□ -0.82
SSBP3-206ENST00000420121 CD1EP15812 388 aa9.92□□□□□ -0.82
SSBP3-206ENST00000420121 ZNF17P17021 662 aa9.92□□□□□ -0.82
SSBP3-206ENST00000420121 MAPK1P28482 360 aa9.92□□□□□ -0.82
SSBP3-206ENST00000420121 LCN1P31025 176 aa9.92□□□□□ -0.82
SSBP3-206ENST00000420121 RPL3P39023 403 aaKnown RBP9.92□□□□□ -0.82
SSBP3-206ENST00000420121 SLC6A8P48029 635 aa9.92□□□□□ -0.82
SSBP3-206ENST00000420121 PCYT1AP49585 367 aa9.92□□□□□ -0.82
SSBP3-206ENST00000420121 CLK3P49761 638 aaKnown RBP9.92□□□□□ -0.82
SSBP3-206ENST00000420121 POU6F2P78424 691 aaPredicted RBP9.92□□□□□ -0.82
SSBP3-206ENST00000420121 LSM11P83369 360 aaKnown RBP eCLIP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms