RNA–Protein interactions for RNA: ENST00000420058.1

NFE4-201, Transcript of nuclear factor, erythroid 4, humanhuman

TSL 1 (best)

Gene NFE4, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4-201ENST00000420058 SFRP5Q5T4F7 317 aa12.66□□□□□ -0.38
NFE4-201ENST00000420058 CPTPQ5TA50 214 aa12.66□□□□□ -0.38
NFE4-201ENST00000420058 FAM71E1Q6IPT2 247 aa12.66□□□□□ -0.38
NFE4-201ENST00000420058 PPP4R4Q6NUP7 873 aa12.66□□□□□ -0.38
NFE4-201ENST00000420058 FIGNL1Q6PIW4 674 aa12.66□□□□□ -0.38
NFE4-201ENST00000420058 TFAP2EQ6VUC0 442 aa12.66□□□□□ -0.38
NFE4-201ENST00000420058 ZAR1Q86SH2 424 aa12.66□□□□□ -0.38
NFE4-201ENST00000420058 EXOC3L1Q86VI1 746 aa12.66□□□□□ -0.38
NFE4-201ENST00000420058 WDR75Q8IWA0 830 aaKnown RBP12.66□□□□□ -0.38
NFE4-201ENST00000420058 STEAP2Q8NFT2 490 aa12.66□□□□□ -0.38
NFE4-201ENST00000420058 OR2V1Q8NHB1 315 aa12.66□□□□□ -0.38
NFE4-201ENST00000420058 PIWIL2Q8TC59 973 aaKnown RBP12.66□□□□□ -0.38
NFE4-201ENST00000420058 ROBO4Q8WZ75 1007 aa12.66□□□□□ -0.38
NFE4-201ENST00000420058 OSTF1Q92882 214 aa12.66□□□□□ -0.38
NFE4-201ENST00000420058 AMDHD1Q96NU7 426 aa12.66□□□□□ -0.38
NFE4-201ENST00000420058 ZNF382Q96SR6 550 aa12.66□□□□□ -0.38
NFE4-201ENST00000420058 TRAF4Q9BUZ4 470 aaPredicted RBP12.66□□□□□ -0.38
NFE4-201ENST00000420058 TRIM2Q9C040 744 aa12.66□□□□□ -0.38
NFE4-201ENST00000420058 MRPL46Q9H2W6 279 aaKnown RBP12.66□□□□□ -0.38
NFE4-201ENST00000420058 GIMAP4Q9NUV9 329 aa12.66□□□□□ -0.38
NFE4-201ENST00000420058 FBXO34Q9NWN3 711 aa12.66□□□□□ -0.38
NFE4-201ENST00000420058 PAQR5Q9NXK6 330 aaPredicted RBP12.66□□□□□ -0.38
NFE4-201ENST00000420058 NINJ2Q9NZG7 142 aa12.66□□□□□ -0.38
NFE4-201ENST00000420058 UTP11Q9Y3A2 253 aaKnown RBP12.66□□□□□ -0.38
NFE4-201ENST00000420058 TENM1Q9UKZ4 2725 aa12.65□□□□□ -0.38
NFE4-201ENST00000420058 IGHV4-30-2A0A087WSY4 118 aa12.65□□□□□ -0.38
NFE4-201ENST00000420058 A0A1W2PRB8 838 aa12.65□□□□□ -0.38
NFE4-201ENST00000420058 ESYT3A0FGR9 886 aa12.65□□□□□ -0.38
NFE4-201ENST00000420058 C7orf72A4D263 438 aa12.65□□□□□ -0.38
NFE4-201ENST00000420058 A8MV72 311 aaPredicted RBP12.65□□□□□ -0.38
NFE4-201ENST00000420058 ALG1L2C9J202 215 aa12.65□□□□□ -0.38
NFE4-201ENST00000420058 RAMP1O60894 148 aa12.65□□□□□ -0.38
NFE4-201ENST00000420058 KRT6AP02538 564 aa12.65□□□□□ -0.38
NFE4-201ENST00000420058 KRT6BP04259 564 aa12.65□□□□□ -0.38
NFE4-201ENST00000420058 CD3EP07766 207 aa12.65□□□□□ -0.38
NFE4-201ENST00000420058 ANXA4P09525 319 aaPredicted RBP12.65□□□□□ -0.38
NFE4-201ENST00000420058 ADH6P28332 368 aa12.65□□□□□ -0.38
NFE4-201ENST00000420058 RFX3P48380 749 aa12.65□□□□□ -0.38
NFE4-201ENST00000420058 KRT6CP48668 564 aa12.65□□□□□ -0.38
NFE4-201ENST00000420058 BTKQ06187 659 aa12.65□□□□□ -0.38
NFE4-201ENST00000420058 ACSM2AQ08AH3 577 aa12.65□□□□□ -0.38
NFE4-201ENST00000420058 C2orf80Q0P641 193 aa12.65□□□□□ -0.38
NFE4-201ENST00000420058 RASA2Q15283 850 aa12.65□□□□□ -0.38
NFE4-201ENST00000420058 TSNAXIP1Q2TAA8 658 aa12.65□□□□□ -0.38
NFE4-201ENST00000420058 PLPPR5Q32ZL2 321 aa12.65□□□□□ -0.38
NFE4-201ENST00000420058 KRTAP24-1Q3LI83 254 aa12.65□□□□□ -0.38
NFE4-201ENST00000420058 CHRFAM7AQ494W8 412 aa12.65□□□□□ -0.38
NFE4-201ENST00000420058 SPIN4Q56A73 249 aa12.65□□□□□ -0.38
NFE4-201ENST00000420058 ZNF678Q5SXM1 525 aa12.65□□□□□ -0.38
NFE4-201ENST00000420058 ACSM2BQ68CK6 577 aa12.65□□□□□ -0.38
NFE4-201ENST00000420058 ESPNLQ6ZVH7 1005 aa12.65□□□□□ -0.38
NFE4-201ENST00000420058 DTX2Q86UW9 622 aa12.65□□□□□ -0.38
NFE4-201ENST00000420058 ZNF619Q8N2I2 560 aa12.65□□□□□ -0.38
NFE4-201ENST00000420058 KBTBD8Q8NFY9 601 aa12.65□□□□□ -0.38
NFE4-201ENST00000420058 OR10H5Q8NGA6 315 aa12.65□□□□□ -0.38
NFE4-201ENST00000420058 FAM110BQ8TC76 370 aa12.65□□□□□ -0.38
NFE4-201ENST00000420058 METTL6Q8TCB7 284 aa12.65□□□□□ -0.38
NFE4-201ENST00000420058 ABHD3Q8WU67 409 aa12.65□□□□□ -0.38
NFE4-201ENST00000420058 PIK3R3Q92569 461 aa12.65□□□□□ -0.38
NFE4-201ENST00000420058 SLC9A6Q92581 669 aa12.65□□□□□ -0.38
NFE4-201ENST00000420058 HDHD5Q9BXW7 423 aa12.65□□□□□ -0.38
NFE4-201ENST00000420058 TBL1XR1Q9BZK7 514 aa12.65□□□□□ -0.38
NFE4-201ENST00000420058 GRIP2Q9C0E4 1043 aa12.65□□□□□ -0.38
NFE4-201ENST00000420058 Q9N2J8 555 aa12.65□□□□□ -0.38
NFE4-201ENST00000420058 MED17Q9NVC6 651 aa12.65□□□□□ -0.38
NFE4-201ENST00000420058 SENP1Q9P0U3 644 aa12.65□□□□□ -0.38
NFE4-201ENST00000420058 MCTS1Q9ULC4 181 aaKnown RBP12.65□□□□□ -0.38
NFE4-201ENST00000420058 TIMM22Q9Y584 194 aa12.65□□□□□ -0.38
NFE4-201ENST00000420058 A0A087WZY1 265 aa12.64□□□□□ -0.39
NFE4-201ENST00000420058 SERTM1A2A2V5 107 aa12.64□□□□□ -0.39
NFE4-201ENST00000420058 SHISA9B4DS77 424 aa12.64□□□□□ -0.39
NFE4-201ENST00000420058 ZNF814B7Z6K7 855 aa12.64□□□□□ -0.39
NFE4-201ENST00000420058 DLX3O60479 287 aa12.64□□□□□ -0.39
NFE4-201ENST00000420058 SLITRK5O94991 958 aa12.64□□□□□ -0.39
NFE4-201ENST00000420058 SYNGR4O95473 234 aa12.64□□□□□ -0.39
NFE4-201ENST00000420058 TUBBP07437 444 aa12.64□□□□□ -0.39
NFE4-201ENST00000420058 FAM157CP0CG43 387 aa12.64□□□□□ -0.39
NFE4-201ENST00000420058 CLK3P49761 638 aaKnown RBP12.64□□□□□ -0.39
NFE4-201ENST00000420058 BSPH1Q075Z2 132 aa12.64□□□□□ -0.39
NFE4-201ENST00000420058 FAPQ12884 760 aa12.64□□□□□ -0.39
NFE4-201ENST00000420058 HBMQ6B0K9 141 aa12.64□□□□□ -0.39
NFE4-201ENST00000420058 GPRIN3Q6ZVF9 776 aa12.64□□□□□ -0.39
NFE4-201ENST00000420058 STK32CQ86UX6 486 aa12.64□□□□□ -0.39
NFE4-201ENST00000420058 TUSC5Q8IXB3 177 aa12.64□□□□□ -0.39
NFE4-201ENST00000420058 RNF128Q8TEB7 428 aa12.64□□□□□ -0.39
NFE4-201ENST00000420058 HSD17B8Q92506 261 aa12.64□□□□□ -0.39
NFE4-201ENST00000420058 GTPBP3Q969Y2 492 aaKnown RBP12.64□□□□□ -0.39
NFE4-201ENST00000420058 RNF145Q96MT1 663 aa12.64□□□□□ -0.39
NFE4-201ENST00000420058 TMEM237Q96Q45 408 aa12.64□□□□□ -0.39
NFE4-201ENST00000420058 KCNA7Q96RP8 456 aa12.64□□□□□ -0.39
NFE4-201ENST00000420058 TACO1Q9BSH4 297 aaKnown RBP12.64□□□□□ -0.39
NFE4-201ENST00000420058 SRXN1Q9BYN0 137 aa12.64□□□□□ -0.39
NFE4-201ENST00000420058 SHCBP1LQ9BZQ2 653 aa12.64□□□□□ -0.39
NFE4-201ENST00000420058 TMEM185BQ9H7F4 350 aa12.64□□□□□ -0.39
NFE4-201ENST00000420058 ING1Q9UK53 422 aaPredicted RBP12.64□□□□□ -0.39
NFE4-201ENST00000420058 GRID1Q9ULK0 1009 aa12.64□□□□□ -0.39
NFE4-201ENST00000420058 B3GALT5Q9Y2C3 310 aa12.64□□□□□ -0.39
NFE4-201ENST00000420058 MALRD1Q5VYJ5 2156 aa12.64□□□□□ -0.39
NFE4-201ENST00000420058 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.63□□□□□ -0.39
NFE4-201ENST00000420058 SUPT7LO94864 414 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms