RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 ZANQ9Y493 2812 aa13.28□□□□□ -0.28
RPS28-201ENST00000417088 USF3Q68DE3 2245 aa13.28□□□□□ -0.28
RPS28-201ENST00000417088 HEATR5AQ86XA9 2040 aa13.27□□□□□ -0.28
RPS28-201ENST00000417088 PRR14LQ5THK1 2151 aa13.27□□□□□ -0.28
RPS28-201ENST00000417088 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.27□□□□□ -0.29
RPS28-201ENST00000417088 A0A087WZY1 265 aa13.27□□□□□ -0.29
RPS28-201ENST00000417088 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.27□□□□□ -0.29
RPS28-201ENST00000417088 TRIM64A6NGJ6 449 aa13.27□□□□□ -0.29
RPS28-201ENST00000417088 TRIM64BA6NI03 449 aa13.27□□□□□ -0.29
RPS28-201ENST00000417088 NPIPB8E9PQR5 432 aa13.27□□□□□ -0.29
RPS28-201ENST00000417088 SMAD7O15105 426 aaKnown RBP13.27□□□□□ -0.29
RPS28-201ENST00000417088 NDUFB5O43674 189 aa13.27□□□□□ -0.29
RPS28-201ENST00000417088 CXCL13O43927 109 aa13.27□□□□□ -0.29
RPS28-201ENST00000417088 OXSR1O95747 527 aaPredicted RBP13.27□□□□□ -0.29
RPS28-201ENST00000417088 OPN1LWP04000 364 aa13.27□□□□□ -0.29
RPS28-201ENST00000417088 NGFRP08138 427 aa13.27□□□□□ -0.29
RPS28-201ENST00000417088 UROSP10746 265 aa13.27□□□□□ -0.29
RPS28-201ENST00000417088 ZNF17P17021 662 aa13.27□□□□□ -0.29
RPS28-201ENST00000417088 PRPH2P23942 346 aa13.27□□□□□ -0.29
RPS28-201ENST00000417088 PSMA4P25789 261 aaKnown RBP13.27□□□□□ -0.29
RPS28-201ENST00000417088 PRKAG1P54619 331 aa13.27□□□□□ -0.29
RPS28-201ENST00000417088 VPS26BQ4G0F5 336 aa13.27□□□□□ -0.29
RPS28-201ENST00000417088 ZNF385BQ569K4 471 aa13.27□□□□□ -0.29
RPS28-201ENST00000417088 BEX5Q5H9J7 111 aa13.27□□□□□ -0.29
RPS28-201ENST00000417088 CFAP157Q5JU67 520 aa13.27□□□□□ -0.29
RPS28-201ENST00000417088 STAC2Q6ZMT1 411 aa13.27□□□□□ -0.29
RPS28-201ENST00000417088 ZAR1Q86SH2 424 aa13.27□□□□□ -0.29
RPS28-201ENST00000417088 GALNT10Q86SR1 603 aa13.27□□□□□ -0.29
RPS28-201ENST00000417088 WDR75Q8IWA0 830 aaKnown RBP13.27□□□□□ -0.29
RPS28-201ENST00000417088 IFT20Q8IY31 132 aa13.27□□□□□ -0.29
RPS28-201ENST00000417088 GTPBP8Q8N3Z3 284 aaPredicted RBP13.27□□□□□ -0.29
RPS28-201ENST00000417088 CDRT4Q8N9R6 151 aa13.27□□□□□ -0.29
RPS28-201ENST00000417088 GATSQ8NAP1 163 aa13.27□□□□□ -0.29
RPS28-201ENST00000417088 NUP43Q8NFH3 380 aa13.27□□□□□ -0.29
RPS28-201ENST00000417088 FAM110BQ8TC76 370 aa13.27□□□□□ -0.29
RPS28-201ENST00000417088 NUDT8Q8WV74 236 aa13.27□□□□□ -0.29
RPS28-201ENST00000417088 IGFBPL1Q8WX77 278 aa13.27□□□□□ -0.29
RPS28-201ENST00000417088 GIMAP5Q96F15 307 aa13.27□□□□□ -0.29
RPS28-201ENST00000417088 ZNF764Q96H86 408 aaPredicted RBP13.27□□□□□ -0.29
RPS28-201ENST00000417088 GMPPAQ96IJ6 420 aaPredicted RBP13.27□□□□□ -0.29
RPS28-201ENST00000417088 KLHDC3Q9BQ90 382 aa13.27□□□□□ -0.29
RPS28-201ENST00000417088 GSX2Q9BZM3 304 aa13.27□□□□□ -0.29
RPS28-201ENST00000417088 LRTM1Q9HBL6 345 aa13.27□□□□□ -0.29
RPS28-201ENST00000417088 C1orf109Q9NX04 203 aa13.27□□□□□ -0.29
RPS28-201ENST00000417088 PAQR5Q9NXK6 330 aaPredicted RBP13.27□□□□□ -0.29
RPS28-201ENST00000417088 NTMQ9P121 344 aa13.27□□□□□ -0.29
RPS28-201ENST00000417088 A0A1W2PRB8 838 aa13.26□□□□□ -0.29
RPS28-201ENST00000417088 C7orf72A4D263 438 aa13.26□□□□□ -0.29
RPS28-201ENST00000417088 SLC28A1O00337 649 aa13.26□□□□□ -0.29
RPS28-201ENST00000417088 ADAMDEC1O15204 470 aa13.26□□□□□ -0.29
RPS28-201ENST00000417088 PLIN3O60664 434 aa13.26□□□□□ -0.29
RPS28-201ENST00000417088 TBX19O60806 448 aa13.26□□□□□ -0.29
RPS28-201ENST00000417088 PLGP00747 810 aaPredicted RBP13.26□□□□□ -0.29
RPS28-201ENST00000417088 ACP2P11117 423 aa13.26□□□□□ -0.29
RPS28-201ENST00000417088 PPP3CBP16298 524 aa13.26□□□□□ -0.29
RPS28-201ENST00000417088 GPC1P35052 558 aa13.26□□□□□ -0.29
RPS28-201ENST00000417088 PTH2RP49190 550 aa13.26□□□□□ -0.29
RPS28-201ENST00000417088 CTBP2P56545 445 aa13.26□□□□□ -0.29
RPS28-201ENST00000417088 RAC1P63000 192 aa13.26□□□□□ -0.29
RPS28-201ENST00000417088 SLC18A2Q05940 514 aa13.26□□□□□ -0.29
RPS28-201ENST00000417088 CLEC6AQ6EIG7 209 aa13.26□□□□□ -0.29
RPS28-201ENST00000417088 FIGNL1Q6PIW4 674 aa13.26□□□□□ -0.29
RPS28-201ENST00000417088 Q6ZSR9 355 aa13.26□□□□□ -0.29
RPS28-201ENST00000417088 PLEKHM3Q6ZWE6 761 aa13.26□□□□□ -0.29
RPS28-201ENST00000417088 PRIMA1Q86XR5 153 aa13.26□□□□□ -0.29
RPS28-201ENST00000417088 CNPY4Q8N129 248 aa13.26□□□□□ -0.29
RPS28-201ENST00000417088 OR2T11Q8NH01 316 aa13.26□□□□□ -0.29
RPS28-201ENST00000417088 CEP70Q8NHQ1 597 aa13.26□□□□□ -0.29
RPS28-201ENST00000417088 ZFP28Q8NHY6 868 aa13.26□□□□□ -0.29
RPS28-201ENST00000417088 FBXO30Q8TB52 745 aa13.26□□□□□ -0.29
RPS28-201ENST00000417088 FCRL1Q96LA6 429 aa13.26□□□□□ -0.29
RPS28-201ENST00000417088 RNF145Q96MT1 663 aa13.26□□□□□ -0.29
RPS28-201ENST00000417088 CCT7Q99832 543 aa13.26□□□□□ -0.29
RPS28-201ENST00000417088 C12orf65Q9H3J6 166 aaKnown RBP13.26□□□□□ -0.29
RPS28-201ENST00000417088 REEP4Q9H6H4 257 aa13.26□□□□□ -0.29
RPS28-201ENST00000417088 HHATLQ9HCP6 504 aa13.26□□□□□ -0.29
RPS28-201ENST00000417088 MED17Q9NVC6 651 aa13.26□□□□□ -0.29
RPS28-201ENST00000417088 FBXO34Q9NWN3 711 aa13.26□□□□□ -0.29
RPS28-201ENST00000417088 OXSMQ9NWU1 459 aa13.26□□□□□ -0.29
RPS28-201ENST00000417088 MCTS1Q9ULC4 181 aaKnown RBP13.26□□□□□ -0.29
RPS28-201ENST00000417088 UQCRHLA0A096LP55 91 aa13.25□□□□□ -0.29
RPS28-201ENST00000417088 A0A0J9YW62 118 aa13.25□□□□□ -0.29
RPS28-201ENST00000417088 RGS14O43566 566 aa13.25□□□□□ -0.29
RPS28-201ENST00000417088 AKAP10O43572 662 aa13.25□□□□□ -0.29
RPS28-201ENST00000417088 KCNK2O95069 426 aa13.25□□□□□ -0.29
RPS28-201ENST00000417088 SYNGR4O95473 234 aa13.25□□□□□ -0.29
RPS28-201ENST00000417088 PLAUP00749 431 aa13.25□□□□□ -0.29
RPS28-201ENST00000417088 CPA3P15088 417 aa13.25□□□□□ -0.29
RPS28-201ENST00000417088 SDC1P18827 310 aa13.25□□□□□ -0.29
RPS28-201ENST00000417088 PCSK6P29122 969 aa13.25□□□□□ -0.29
RPS28-201ENST00000417088 FRKP42685 505 aaPredicted RBP13.25□□□□□ -0.29
RPS28-201ENST00000417088 MANFP55145 182 aaKnown RBP13.25□□□□□ -0.29
RPS28-201ENST00000417088 DUSP5Q16690 384 aa13.25□□□□□ -0.29
RPS28-201ENST00000417088 PLPPR5Q32ZL2 321 aa13.25□□□□□ -0.29
RPS28-201ENST00000417088 CCDC153Q494R4 210 aa13.25□□□□□ -0.29
RPS28-201ENST00000417088 CPTPQ5TA50 214 aa13.25□□□□□ -0.29
RPS28-201ENST00000417088 ZNF704Q6ZNC4 412 aaPredicted RBP13.25□□□□□ -0.29
RPS28-201ENST00000417088 SLC16A11Q8NCK7 471 aa13.25□□□□□ -0.29
RPS28-201ENST00000417088 OR6Y1Q8NGX8 325 aa13.25□□□□□ -0.29
RPS28-201ENST00000417088 OR2V1Q8NHB1 315 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms