RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 RPS4XP62701 263 aaKnown RBP17.28■□□□□ 0.36
UBXN4-202ENST00000415164 OCRLQ01968 901 aa17.28■□□□□ 0.36
UBXN4-202ENST00000415164 CAPRIN1Q14444 709 aaKnown RBP17.28■□□□□ 0.36
UBXN4-202ENST00000415164 PDSS1Q5T2R2 415 aa17.28■□□□□ 0.36
UBXN4-202ENST00000415164 NOXRED1Q6NXP6 359 aa17.28■□□□□ 0.36
UBXN4-202ENST00000415164 TIFABQ6ZNK6 161 aa17.28■□□□□ 0.36
UBXN4-202ENST00000415164 CXXC5Q7LFL8 322 aaKnown RBP17.28■□□□□ 0.36
UBXN4-202ENST00000415164 ZNF619Q8N2I2 560 aa17.28■□□□□ 0.36
UBXN4-202ENST00000415164 ZNF611Q8N823 705 aa17.28■□□□□ 0.36
UBXN4-202ENST00000415164 CIDECQ96AQ7 238 aaPredicted RBP17.28■□□□□ 0.36
UBXN4-202ENST00000415164 L3HYPDHQ96EM0 354 aa17.28■□□□□ 0.36
UBXN4-202ENST00000415164 C11orf24Q96F05 449 aaPredicted RBP17.28■□□□□ 0.36
UBXN4-202ENST00000415164 OTUB1Q96FW1 271 aaPredicted RBP17.28■□□□□ 0.36
UBXN4-202ENST00000415164 CHMP6Q96FZ7 201 aa17.28■□□□□ 0.36
UBXN4-202ENST00000415164 REXO5Q96IC2 774 aaKnown RBP17.28■□□□□ 0.36
UBXN4-202ENST00000415164 PAQR5Q9NXK6 330 aaPredicted RBP17.28■□□□□ 0.36
UBXN4-202ENST00000415164 TLN2Q9Y4G6 2542 aa17.27■□□□□ 0.36
UBXN4-202ENST00000415164 A0A087WZY1 265 aa17.27■□□□□ 0.36
UBXN4-202ENST00000415164 A0A1W2PRB8 838 aa17.27■□□□□ 0.36
UBXN4-202ENST00000415164 UBFD1O14562 309 aaKnown RBP17.27■□□□□ 0.36
UBXN4-202ENST00000415164 SEC22BO75396 215 aa17.27■□□□□ 0.36
UBXN4-202ENST00000415164 NTN1O95631 604 aa17.27■□□□□ 0.36
UBXN4-202ENST00000415164 OXSR1O95747 527 aaPredicted RBP17.27■□□□□ 0.36
UBXN4-202ENST00000415164 TUBBP07437 444 aa17.27■□□□□ 0.36
UBXN4-202ENST00000415164 SFTPDP35247 375 aa17.27■□□□□ 0.36
UBXN4-202ENST00000415164 SLC18A2Q05940 514 aa17.27■□□□□ 0.36
UBXN4-202ENST00000415164 SLC29A2Q14542 456 aa17.27■□□□□ 0.36
UBXN4-202ENST00000415164 TSC22D1Q15714 1073 aa17.27■□□□□ 0.36
UBXN4-202ENST00000415164 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.27■□□□□ 0.36
UBXN4-202ENST00000415164 CLEC12BQ2HXU8 276 aa17.27■□□□□ 0.36
UBXN4-202ENST00000415164 TMEM44Q2T9K0 475 aa17.27■□□□□ 0.36
UBXN4-202ENST00000415164 VPS26BQ4G0F5 336 aa17.27■□□□□ 0.36
UBXN4-202ENST00000415164 NOA1Q8NC60 698 aaKnown RBP17.27■□□□□ 0.36
UBXN4-202ENST00000415164 RAB3IL1Q8TBN0 382 aa17.27■□□□□ 0.36
UBXN4-202ENST00000415164 ROBO4Q8WZ75 1007 aa17.27■□□□□ 0.36
UBXN4-202ENST00000415164 GTPBP3Q969Y2 492 aaKnown RBP17.27■□□□□ 0.36
UBXN4-202ENST00000415164 EGLN2Q96KS0 407 aa17.27■□□□□ 0.36
UBXN4-202ENST00000415164 RRAGDQ9NQL2 400 aaPredicted RBP17.27■□□□□ 0.36
UBXN4-202ENST00000415164 MED17Q9NVC6 651 aa17.27■□□□□ 0.36
UBXN4-202ENST00000415164 SIRT5Q9NXA8 310 aa17.27■□□□□ 0.36
UBXN4-202ENST00000415164 TBK1Q9UHD2 729 aa17.27■□□□□ 0.36
UBXN4-202ENST00000415164 CSPG4Q6UVK1 2322 aa17.26■□□□□ 0.35
UBXN4-202ENST00000415164 IGLV3-32A0A0A0MS00 114 aa17.26■□□□□ 0.35
UBXN4-202ENST00000415164 AKAP10O43572 662 aa17.26■□□□□ 0.35
UBXN4-202ENST00000415164 MYL2P10916 166 aa17.26■□□□□ 0.35
UBXN4-202ENST00000415164 PYGBP11216 843 aa17.26■□□□□ 0.35
UBXN4-202ENST00000415164 GCAP28676 217 aa17.26■□□□□ 0.35
UBXN4-202ENST00000415164 ECHS1P30084 290 aa17.26■□□□□ 0.35
UBXN4-202ENST00000415164 AGTR1P30556 359 aa17.26■□□□□ 0.35
UBXN4-202ENST00000415164 RNF144AP50876 292 aaPredicted RBP17.26■□□□□ 0.35
UBXN4-202ENST00000415164 RAC1P63000 192 aa17.26■□□□□ 0.35
UBXN4-202ENST00000415164 DMTNQ08495 405 aa17.26■□□□□ 0.35
UBXN4-202ENST00000415164 CFAP157Q5JU67 520 aa17.26■□□□□ 0.35
UBXN4-202ENST00000415164 MFSD12Q6NUT3 480 aa17.26■□□□□ 0.35
UBXN4-202ENST00000415164 IKBIPQ70UQ0 350 aa17.26■□□□□ 0.35
UBXN4-202ENST00000415164 GTPBP8Q8N3Z3 284 aaPredicted RBP17.26■□□□□ 0.35
UBXN4-202ENST00000415164 NUP43Q8NFH3 380 aa17.26■□□□□ 0.35
UBXN4-202ENST00000415164 OR4C3Q8NH37 302 aa17.26■□□□□ 0.35
UBXN4-202ENST00000415164 JADE3Q92613 823 aa17.26■□□□□ 0.35
UBXN4-202ENST00000415164 OSTF1Q92882 214 aa17.26■□□□□ 0.35
UBXN4-202ENST00000415164 ZBTB8AQ96BR9 441 aa17.26■□□□□ 0.35
UBXN4-202ENST00000415164 S100PBPQ96BU1 408 aa17.26■□□□□ 0.35
UBXN4-202ENST00000415164 ADGRG7Q96K78 797 aa17.26■□□□□ 0.35
UBXN4-202ENST00000415164 GLRX2Q9NS18 164 aa17.26■□□□□ 0.35
UBXN4-202ENST00000415164 ZNF701Q9NV72 531 aaPredicted RBP17.26■□□□□ 0.35
UBXN4-202ENST00000415164 TAS2R7Q9NYW3 318 aa17.26■□□□□ 0.35
UBXN4-202ENST00000415164 GPR52Q9Y2T5 361 aa17.26■□□□□ 0.35
UBXN4-202ENST00000415164 FIS1Q9Y3D6 152 aa17.26■□□□□ 0.35
UBXN4-202ENST00000415164 FBN3Q75N90 2809 aa17.26■□□□□ 0.35
UBXN4-202ENST00000415164 ZANQ9Y493 2812 aa17.26■□□□□ 0.35
UBXN4-202ENST00000415164 A0A0J9YW62 118 aa17.25■□□□□ 0.35
UBXN4-202ENST00000415164 SERTM1A2A2V5 107 aa17.25■□□□□ 0.35
UBXN4-202ENST00000415164 TTC36A6NLP5 189 aa17.25■□□□□ 0.35
UBXN4-202ENST00000415164 ALG1L2C9J202 215 aa17.25■□□□□ 0.35
UBXN4-202ENST00000415164 RSL1D1O76021 490 aaKnown RBP17.25■□□□□ 0.35
UBXN4-202ENST00000415164 NUDT14O95848 222 aa17.25■□□□□ 0.35
UBXN4-202ENST00000415164 TP53P04637 393 aaPredicted RBP17.25■□□□□ 0.35
UBXN4-202ENST00000415164 IL32P24001 234 aa17.25■□□□□ 0.35
UBXN4-202ENST00000415164 CDKN1AP38936 164 aa17.25■□□□□ 0.35
UBXN4-202ENST00000415164 ZNF844Q08AG5 666 aa17.25■□□□□ 0.35
UBXN4-202ENST00000415164 WHAMMP3Q1A5X7 153 aa17.25■□□□□ 0.35
UBXN4-202ENST00000415164 PLPPR5Q32ZL2 321 aa17.25■□□□□ 0.35
UBXN4-202ENST00000415164 GLE1Q53GS7 698 aaKnown RBP17.25■□□□□ 0.35
UBXN4-202ENST00000415164 TMEM201Q5SNT2 666 aa17.25■□□□□ 0.35
UBXN4-202ENST00000415164 CPTPQ5TA50 214 aa17.25■□□□□ 0.35
UBXN4-202ENST00000415164 GTF2IRD2BQ6EKJ0 949 aa17.25■□□□□ 0.35
UBXN4-202ENST00000415164 ESPNLQ6ZVH7 1005 aa17.25■□□□□ 0.35
UBXN4-202ENST00000415164 GTF2IRD2Q86UP8 949 aa17.25■□□□□ 0.35
UBXN4-202ENST00000415164 LCA5Q86VQ0 697 aa17.25■□□□□ 0.35
UBXN4-202ENST00000415164 ATP6V1C2Q8NEY4 427 aa17.25■□□□□ 0.35
UBXN4-202ENST00000415164 STEAP2Q8NFT2 490 aa17.25■□□□□ 0.35
UBXN4-202ENST00000415164 CLHC1Q8NHS4 586 aa17.25■□□□□ 0.35
UBXN4-202ENST00000415164 ZFP28Q8NHY6 868 aa17.25■□□□□ 0.35
UBXN4-202ENST00000415164 FAM76AQ8TAV0 307 aa17.25■□□□□ 0.35
UBXN4-202ENST00000415164 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.25■□□□□ 0.35
UBXN4-202ENST00000415164 IGFBPL1Q8WX77 278 aa17.25■□□□□ 0.35
UBXN4-202ENST00000415164 TRMT61AQ96FX7 289 aaKnown RBP17.25■□□□□ 0.35
UBXN4-202ENST00000415164 C16orf45Q96MC5 204 aaPredicted RBP17.25■□□□□ 0.35
UBXN4-202ENST00000415164 IQCGQ9H095 443 aaKnown RBP17.25■□□□□ 0.35
UBXN4-202ENST00000415164 SH3BP4Q9P0V3 963 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms