RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 ADGRD2Q7Z7M1 963 aa9.18□□□□□ -0.94
SS18-203ENST00000415083 OR2L8Q8NGY9 312 aa9.18□□□□□ -0.94
SS18-203ENST00000415083 SLC41A3Q96GZ6 507 aa9.18□□□□□ -0.94
SS18-203ENST00000415083 QRFPRQ96P65 431 aa9.18□□□□□ -0.94
SS18-203ENST00000415083 ABHD1Q96SE0 405 aa9.18□□□□□ -0.94
SS18-203ENST00000415083 SLA2Q9H6Q3 261 aa9.18□□□□□ -0.94
SS18-203ENST00000415083 MCUBQ9NWR8 336 aa9.18□□□□□ -0.94
SS18-203ENST00000415083 KCMF1Q9P0J7 381 aa9.18□□□□□ -0.94
SS18-203ENST00000415083 DOCK8Q8NF50 2099 aa9.18□□□□□ -0.94
SS18-203ENST00000415083 CENPBD1B2RD01 187 aa9.18□□□□□ -0.94
SS18-203ENST00000415083 SGK494L7N484 410 aa9.18□□□□□ -0.94
SS18-203ENST00000415083 TNFRSF10AO00220 468 aa9.18□□□□□ -0.94
SS18-203ENST00000415083 P2RX6O15547 441 aa9.18□□□□□ -0.94
SS18-203ENST00000415083 HCN1O60741 890 aa9.18□□□□□ -0.94
SS18-203ENST00000415083 SC5DO75845 299 aa9.18□□□□□ -0.94
SS18-203ENST00000415083 PAK4O96013 591 aaPredicted RBP9.18□□□□□ -0.94
SS18-203ENST00000415083 SRP9P49458 86 aaKnown RBP9.18□□□□□ -0.94
SS18-203ENST00000415083 RAB28P51157 221 aa9.18□□□□□ -0.94
SS18-203ENST00000415083 ARFIP1P53367 373 aa9.18□□□□□ -0.94
SS18-203ENST00000415083 SLC9A5Q14940 896 aa9.18□□□□□ -0.94
SS18-203ENST00000415083 SLC25A35Q3KQZ1 300 aa9.18□□□□□ -0.94
SS18-203ENST00000415083 STPG1Q5TH74 334 aa9.18□□□□□ -0.94
SS18-203ENST00000415083 LCN1P1Q5VSP4 162 aa9.18□□□□□ -0.94
SS18-203ENST00000415083 FCRLBQ6BAA4 426 aa9.18□□□□□ -0.94
SS18-203ENST00000415083 RPTNQ6XPR3 784 aa9.18□□□□□ -0.94
SS18-203ENST00000415083 MBOAT2Q6ZWT7 520 aa9.18□□□□□ -0.94
SS18-203ENST00000415083 OR4N5Q8IXE1 308 aa9.18□□□□□ -0.94
SS18-203ENST00000415083 OR13C5Q8NGS8 318 aa9.18□□□□□ -0.94
SS18-203ENST00000415083 ACOT11Q8WXI4 607 aaPredicted RBP9.18□□□□□ -0.94
SS18-203ENST00000415083 ART5Q96L15 291 aa9.18□□□□□ -0.94
SS18-203ENST00000415083 TBX5Q99593 518 aa9.18□□□□□ -0.94
SS18-203ENST00000415083 SARGQ9BW04 601 aa9.18□□□□□ -0.94
SS18-203ENST00000415083 PITHD1Q9GZP4 211 aaPredicted RBP9.18□□□□□ -0.94
SS18-203ENST00000415083 IMP3Q9NV31 184 aaKnown RBP9.18□□□□□ -0.94
SS18-203ENST00000415083 NPIPA5A0A0B4J1W7 369 aa9.18□□□□□ -0.94
SS18-203ENST00000415083 A0A0B4J203 849 aa9.18□□□□□ -0.94
SS18-203ENST00000415083 NPIPA7E9PJI5 369 aa9.18□□□□□ -0.94
SS18-203ENST00000415083 EMC8O43402 210 aa9.18□□□□□ -0.94
SS18-203ENST00000415083 YES1P07947 543 aa9.18□□□□□ -0.94
SS18-203ENST00000415083 SYPP08247 313 aa9.18□□□□□ -0.94
SS18-203ENST00000415083 NPIPA8P0DM63 369 aa9.18□□□□□ -0.94
SS18-203ENST00000415083 ARSBP15848 533 aa9.18□□□□□ -0.94
SS18-203ENST00000415083 HTR2BP41595 481 aa9.18□□□□□ -0.94
SS18-203ENST00000415083 IL18Q14116 193 aa9.18□□□□□ -0.94
SS18-203ENST00000415083 TCEA2Q15560 299 aa9.18□□□□□ -0.94
SS18-203ENST00000415083 DUSP5Q16690 384 aa9.18□□□□□ -0.94
SS18-203ENST00000415083 PUS10Q3MIT2 529 aaKnown RBP9.18□□□□□ -0.94
SS18-203ENST00000415083 NIPAL3Q6P499 406 aa9.18□□□□□ -0.94
SS18-203ENST00000415083 PLBD1Q6P4A8 553 aa9.18□□□□□ -0.94
SS18-203ENST00000415083 ZAR1Q86SH2 424 aa9.18□□□□□ -0.94
SS18-203ENST00000415083 FANCMQ8IYD8 2048 aa9.18□□□□□ -0.94
SS18-203ENST00000415083 TMEM52Q8NDY8 209 aa9.18□□□□□ -0.94
SS18-203ENST00000415083 OR2L5Q8NG80 312 aa9.18□□□□□ -0.94
SS18-203ENST00000415083 OR51G2Q8NGK0 314 aa9.18□□□□□ -0.94
SS18-203ENST00000415083 OR52N1Q8NH53 320 aa9.18□□□□□ -0.94
SS18-203ENST00000415083 PEX11GQ96HA9 241 aa9.18□□□□□ -0.94
SS18-203ENST00000415083 UBL7Q96S82 380 aaPredicted RBP9.18□□□□□ -0.94
SS18-203ENST00000415083 SLC6A17Q9H1V8 727 aa9.18□□□□□ -0.94
SS18-203ENST00000415083 NTMQ9P121 344 aa9.18□□□□□ -0.94
SS18-203ENST00000415083 ZNF443Q9Y2A4 671 aaPredicted RBP9.18□□□□□ -0.94
SS18-203ENST00000415083 MAGEB4O15481 346 aaPredicted RBP9.17□□□□□ -0.94
SS18-203ENST00000415083 GKN3PP0CG01 181 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 MYOGP15173 224 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 SLC2A5P22732 501 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 PPP2R1BP30154 601 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 SLC6A1P30531 599 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 PRKAR1BP31321 381 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 ZNF85Q03923 595 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 FHL5Q5TD97 284 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 PRAMEF8Q5VWM4 474 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 PRAMEF7Q5VXH5 474 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 MFSD12Q6NUT3 480 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 TMEFF1Q8IYR6 380 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 LINC00471Q8N535 108 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 DNAJC5GQ8N7S2 189 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 OR11H4Q8NGC9 324 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 OR4D9Q8NGE8 314 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 SP7Q8TDD2 431 aaPredicted RBP9.17□□□□□ -0.94
SS18-203ENST00000415083 ZNRF4Q8WWF5 429 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 PGLYRP3Q96LB9 341 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 GFM1Q96RP9 751 aaKnown RBP9.17□□□□□ -0.94
SS18-203ENST00000415083 MCHR1Q99705 422 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 WACQ9BTA9 647 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 DPH1Q9BZG8 443 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 ANKRD10Q9NXR5 420 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 SLC23A1Q9UHI7 598 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 KLHL21Q9UJP4 597 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 A0A087WV48 116 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 A0A0A6YYJ9 748 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 NFATC1O95644 943 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 NGFRP08138 427 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 SLC35G4P0C7Q5 338 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 POU3F3P20264 500 aaPredicted RBP9.17□□□□□ -0.94
SS18-203ENST00000415083 VEGFBP49765 207 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 ARPC4P59998 168 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 CCDC85BQ15834 202 aaPredicted RBP9.17□□□□□ -0.94
SS18-203ENST00000415083 TRMT12Q53H54 448 aaKnown RBP9.17□□□□□ -0.94
SS18-203ENST00000415083 SYT9Q86SS6 491 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 GPR135Q8IZ08 494 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 OR11H7Q8NGC8 314 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms