RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 MPDZO75970 2070 aa10.16□□□□□ -0.78
RFFL-204ENST00000414419 ABCA12Q86UK0 2595 aa10.15□□□□□ -0.78
RFFL-204ENST00000414419 GOLGA8QA0A0J9YX86 632 aa10.15□□□□□ -0.78
RFFL-204ENST00000414419 RNF103-CHMP3A0A140T963 221 aa10.15□□□□□ -0.78
RFFL-204ENST00000414419 PRSS51A0A1B0GVH4 220 aa10.15□□□□□ -0.78
RFFL-204ENST00000414419 GOLGA8OA6NCC3 632 aa10.15□□□□□ -0.78
RFFL-204ENST00000414419 MBD3L4A6NDZ8 208 aaPredicted RBP10.15□□□□□ -0.78
RFFL-204ENST00000414419 MBD3L3A6NE82 208 aaPredicted RBP10.15□□□□□ -0.78
RFFL-204ENST00000414419 MBD3L5A6NJ08 208 aaPredicted RBP10.15□□□□□ -0.78
RFFL-204ENST00000414419 CLCA1A8K7I4 914 aa10.15□□□□□ -0.78
RFFL-204ENST00000414419 ALG1L2C9J202 215 aa10.15□□□□□ -0.78
RFFL-204ENST00000414419 GOLGA8NF8WBI6 632 aa10.15□□□□□ -0.78
RFFL-204ENST00000414419 H3BNH8 94 aa10.15□□□□□ -0.78
RFFL-204ENST00000414419 SDHDO14521 159 aa10.15□□□□□ -0.78
RFFL-204ENST00000414419 NGFRP08138 427 aa10.15□□□□□ -0.78
RFFL-204ENST00000414419 ZNF708P17019 499 aa10.15□□□□□ -0.78
RFFL-204ENST00000414419 MATN1P21941 496 aa10.15□□□□□ -0.78
RFFL-204ENST00000414419 S100A3P33764 101 aa10.15□□□□□ -0.78
RFFL-204ENST00000414419 OPRM1P35372 400 aa10.15□□□□□ -0.78
RFFL-204ENST00000414419 LHX2P50458 406 aa10.15□□□□□ -0.78
RFFL-204ENST00000414419 NME5P56597 212 aa10.15□□□□□ -0.78
RFFL-204ENST00000414419 TFF3Q07654 80 aa10.15□□□□□ -0.78
RFFL-204ENST00000414419 BCL2A1Q16548 175 aa10.15□□□□□ -0.78
RFFL-204ENST00000414419 GLYR1Q49A26 553 aaPredicted RBP10.15□□□□□ -0.78
RFFL-204ENST00000414419 DCST2Q5T1A1 773 aa10.15□□□□□ -0.78
RFFL-204ENST00000414419 APOOLQ6UXV4 268 aa10.15□□□□□ -0.78
RFFL-204ENST00000414419 HDXQ7Z353 690 aa10.15□□□□□ -0.78
RFFL-204ENST00000414419 P4HA3Q7Z4N8 544 aa10.15□□□□□ -0.78
RFFL-204ENST00000414419 C6orf120Q7Z4R8 191 aa10.15□□□□□ -0.78
RFFL-204ENST00000414419 ANKRD46Q86W74 232 aa10.15□□□□□ -0.78
RFFL-204ENST00000414419 GRAMD2AQ8IUY3 354 aa10.15□□□□□ -0.78
RFFL-204ENST00000414419 WDR75Q8IWA0 830 aaKnown RBP10.15□□□□□ -0.78
RFFL-204ENST00000414419 UBQLNLQ8IYU4 475 aa10.15□□□□□ -0.78
RFFL-204ENST00000414419 CLECL1Q8IZS7 167 aa10.15□□□□□ -0.78
RFFL-204ENST00000414419 GATSQ8NAP1 163 aa10.15□□□□□ -0.78
RFFL-204ENST00000414419 MBD3L2Q8NHZ7 208 aaPredicted RBP10.15□□□□□ -0.78
RFFL-204ENST00000414419 TESCQ96BS2 214 aa10.15□□□□□ -0.78
RFFL-204ENST00000414419 SLC35G5Q96KT7 338 aa10.15□□□□□ -0.78
RFFL-204ENST00000414419 OR7D2Q96RA2 312 aa10.15□□□□□ -0.78
RFFL-204ENST00000414419 ZBTB18Q99592 522 aa10.15□□□□□ -0.78
RFFL-204ENST00000414419 RTN4RQ9BZR6 473 aa10.15□□□□□ -0.78
RFFL-204ENST00000414419 WDR55Q9H6Y2 383 aaPredicted RBP10.15□□□□□ -0.78
RFFL-204ENST00000414419 GPATCH2Q9NW75 528 aa10.15□□□□□ -0.78
RFFL-204ENST00000414419 FBXO34Q9NWN3 711 aa10.15□□□□□ -0.78
RFFL-204ENST00000414419 ADGRG4Q8IZF6 3080 aa10.15□□□□□ -0.79
RFFL-204ENST00000414419 IGLV3-32A0A0A0MS00 114 aa10.14□□□□□ -0.79
RFFL-204ENST00000414419 A0A1W2PQD3 144 aa10.14□□□□□ -0.79
RFFL-204ENST00000414419 OR2M5A3KFT3 312 aa10.14□□□□□ -0.79
RFFL-204ENST00000414419 KDM4EB2RXH2 506 aaPredicted RBP10.14□□□□□ -0.79
RFFL-204ENST00000414419 E9PBE3 544 aa10.14□□□□□ -0.79
RFFL-204ENST00000414419 H3BML4 177 aa10.14□□□□□ -0.79
RFFL-204ENST00000414419 GTPBP1O00178 669 aaKnown RBP10.14□□□□□ -0.79
RFFL-204ENST00000414419 TMIGD3P0DMS9 266 aaPredicted RBP10.14□□□□□ -0.79
RFFL-204ENST00000414419 UQCRC2P22695 453 aa10.14□□□□□ -0.79
RFFL-204ENST00000414419 CTSSP25774 331 aa10.14□□□□□ -0.79
RFFL-204ENST00000414419 EPHA3P29320 983 aa10.14□□□□□ -0.79
RFFL-204ENST00000414419 UQCRC1P31930 480 aa10.14□□□□□ -0.79
RFFL-204ENST00000414419 CHI3L1P36222 383 aaPredicted RBP10.14□□□□□ -0.79
RFFL-204ENST00000414419 ASCL1P50553 236 aa10.14□□□□□ -0.79
RFFL-204ENST00000414419 ZNF41P51814 821 aaPredicted RBP10.14□□□□□ -0.79
RFFL-204ENST00000414419 ZNF136P52737 540 aa10.14□□□□□ -0.79
RFFL-204ENST00000414419 CLDN18P56856 261 aa10.14□□□□□ -0.79
RFFL-204ENST00000414419 RPS3AP61247 264 aaKnown RBP10.14□□□□□ -0.79
RFFL-204ENST00000414419 MYBPHQ13203 477 aa10.14□□□□□ -0.79
RFFL-204ENST00000414419 FAM174BQ3ZCQ3 159 aa10.14□□□□□ -0.79
RFFL-204ENST00000414419 FLYWCH1Q4VC44 716 aa10.14□□□□□ -0.79
RFFL-204ENST00000414419 SPANXN4Q5MJ08 99 aa10.14□□□□□ -0.79
RFFL-204ENST00000414419 EXOSC6Q5RKV6 272 aaKnown RBP10.14□□□□□ -0.79
RFFL-204ENST00000414419 ATAD3BQ5T9A4 648 aa10.14□□□□□ -0.79
RFFL-204ENST00000414419 C16orf62Q7Z3J2 963 aa10.14□□□□□ -0.79
RFFL-204ENST00000414419 MTERF4Q7Z6M4 381 aaKnown RBP10.14□□□□□ -0.79
RFFL-204ENST00000414419 ZAR1Q86SH2 424 aa10.14□□□□□ -0.79
RFFL-204ENST00000414419 TRIML2Q8N7C3 387 aa10.14□□□□□ -0.79
RFFL-204ENST00000414419 ZNF614Q8N883 585 aa10.14□□□□□ -0.79
RFFL-204ENST00000414419 NAXEQ8NCW5 288 aa10.14□□□□□ -0.79
RFFL-204ENST00000414419 OR5M1Q8NGP8 315 aa10.14□□□□□ -0.79
RFFL-204ENST00000414419 PIWIL2Q8TC59 973 aaKnown RBP10.14□□□□□ -0.79
RFFL-204ENST00000414419 PHOSPHO1Q8TCT1 267 aa10.14□□□□□ -0.79
RFFL-204ENST00000414419 LRRC8CQ8TDW0 803 aa10.14□□□□□ -0.79
RFFL-204ENST00000414419 DYDC1Q8WWB3 177 aa10.14□□□□□ -0.79
RFFL-204ENST00000414419 SMPDL3BQ92485 455 aa10.14□□□□□ -0.79
RFFL-204ENST00000414419 ZNF75CPQ92670 426 aaPredicted RBP10.14□□□□□ -0.79
RFFL-204ENST00000414419 WNT2BQ93097 391 aa10.14□□□□□ -0.79
RFFL-204ENST00000414419 ARL8AQ96BM9 186 aa10.14□□□□□ -0.79
RFFL-204ENST00000414419 SH3YL1Q96HL8 342 aaPredicted RBP10.14□□□□□ -0.79
RFFL-204ENST00000414419 ATP6V1G3Q96LB4 118 aa10.14□□□□□ -0.79
RFFL-204ENST00000414419 ZFP3Q96NJ6 502 aa10.14□□□□□ -0.79
RFFL-204ENST00000414419 TRIM8Q9BZR9 551 aa10.14□□□□□ -0.79
RFFL-204ENST00000414419 ACBD3Q9H3P7 528 aa10.14□□□□□ -0.79
RFFL-204ENST00000414419 NPDC1Q9NQX5 325 aaPredicted RBP10.14□□□□□ -0.79
RFFL-204ENST00000414419 EXD2Q9NVH0 621 aa10.14□□□□□ -0.79
RFFL-204ENST00000414419 AIG1Q9NVV5 245 aa10.14□□□□□ -0.79
RFFL-204ENST00000414419 VDAC3Q9Y277 283 aa10.14□□□□□ -0.79
RFFL-204ENST00000414419 ZNF337Q9Y3M9 751 aa10.14□□□□□ -0.79
RFFL-204ENST00000414419 HEATR5AQ86XA9 2040 aa10.14□□□□□ -0.79
RFFL-204ENST00000414419 A0A087WZY1 265 aa10.13□□□□□ -0.79
RFFL-204ENST00000414419 B4DXG7 233 aa10.13□□□□□ -0.79
RFFL-204ENST00000414419 KLF11O14901 512 aa10.13□□□□□ -0.79
RFFL-204ENST00000414419 ANKRD28O15084 1053 aa10.13□□□□□ -0.79
RFFL-204ENST00000414419 SEC14L5O43304 696 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms