RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 PI15O43692 258 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 CIDEAO60543 219 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 TM7SF2O76062 418 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 RECQL5O94762 991 aaPredicted RBP3.83□□□□□ -1.8
CLK1-203ENST00000409769 APBB3O95704 486 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 SLC4A1P02730 911 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 TDGF1P13385 188 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 AOC1P19801 751 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 CD9P21926 228 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 HOXA6P31267 233 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 CD151P48509 253 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 RPS21P63220 83 aaKnown RBP3.83□□□□□ -1.8
CLK1-203ENST00000409769 IFFO1Q0D2I5 559 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 ILF2Q12905 390 aaKnown RBP3.83□□□□□ -1.8
CLK1-203ENST00000409769 PLA2G7Q13093 441 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 DNAJC3Q13217 504 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 ITGA9Q13797 1035 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 ITIH4Q14624 930 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 TMED2Q15363 201 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 WSCD2Q2TBF2 565 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 GPR33Q49SQ1 333 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 C14orf177Q52M58 125 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 CTSL3PQ5NE16 218 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 SEL1L3Q68CR1 1132 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 ZNF470Q6ECI4 717 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 FAM53AQ6NSI3 398 aaPredicted RBP3.83□□□□□ -1.8
CLK1-203ENST00000409769 NEK5Q6P3R8 708 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 CNSTQ6PJW8 725 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 FIGLAQ6QHK4 219 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 FAM151BQ6UXP7 276 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 CERS6Q6ZMG9 384 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 SERPINA9Q86WD7 417 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 TRIM69Q86WT6 500 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 HORMAD1Q86X24 394 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 CTAGE3PQ8IX95 158 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 CNPY4Q8N129 248 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 DDHD1Q8NEL9 900 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 TSTD1Q8NFU3 115 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 OR2T34Q8NGX1 318 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 CXorf40AQ8TE69 158 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 CENPTQ96BT3 561 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 NUS1Q96E22 293 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 COX14Q96I36 57 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 SERAC1Q96JX3 654 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 ATP6V1G3Q96LB4 118 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 BIRC8Q96P09 236 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 RUFY1Q96T51 708 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 CDRT15Q96T59 188 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 ASCL2Q99929 193 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 OMDQ99983 421 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 LMF2Q9BU23 707 aaKnown RBP3.83□□□□□ -1.8
CLK1-203ENST00000409769 ZSCAN5AQ9BUG6 496 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 WRAP53Q9BUR4 548 aaKnown RBP3.83□□□□□ -1.8
CLK1-203ENST00000409769 RIOK2Q9BVS4 552 aaKnown RBP3.83□□□□□ -1.8
CLK1-203ENST00000409769 P2RY12Q9H244 342 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 ASB8Q9H765 288 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 PELI2Q9HAT8 420 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 SGK2Q9HBY8 427 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 PDE7BQ9NP56 450 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 SLC52A3Q9NQ40 469 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 PPANQ9NQ55 473 aaKnown RBP3.83□□□□□ -1.8
CLK1-203ENST00000409769 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.83□□□□□ -1.8
CLK1-203ENST00000409769 PRMT8Q9NR22 394 aaPredicted RBP3.83□□□□□ -1.8
CLK1-203ENST00000409769 FBXO6Q9NRD1 293 aaPredicted RBP3.83□□□□□ -1.8
CLK1-203ENST00000409769 INTS10Q9NVR2 710 aaKnown RBP3.83□□□□□ -1.8
CLK1-203ENST00000409769 FLRT3Q9NZU0 649 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 MRPL15Q9P015 296 aaKnown RBP3.83□□□□□ -1.8
CLK1-203ENST00000409769 TBK1Q9UHD2 729 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 CD84Q9UIB8 345 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 OSGIN1Q9UJX0 560 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 PRSS21Q9Y6M0 314 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 CABIN1Q9Y6J0 2220 aa3.83□□□□□ -1.8
CLK1-203ENST00000409769 PCM1Q15154 2024 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 TMEM131Q92545 1883 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 A0A1W2PPM1 405 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 A0A1W2PRB8 838 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 IGLON5A6NGN9 336 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 OR6C76A6NM76 312 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 TRIM49D1C9J1S8 452 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 E9PI62 339 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 SLCO1B7G3V0H7 640 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 PRMT5O14744 637 aaPredicted RBP3.82□□□□□ -1.8
CLK1-203ENST00000409769 CHUKO15111 745 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 RAD51BO15315 384 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 RGS16O15492 202 aaPredicted RBP3.82□□□□□ -1.8
CLK1-203ENST00000409769 TYROBPO43914 113 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 OR1I1O60431 355 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 NADKO95544 446 aaPredicted RBP3.82□□□□□ -1.8
CLK1-203ENST00000409769 SEMA4FO95754 770 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 CLPTM1O96005 669 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 IGHV4-34P06331 123 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 DCNP07585 359 aaKnown RBP3.82□□□□□ -1.8
CLK1-203ENST00000409769 SNRPAP09012 282 aaKnown RBP3.82□□□□□ -1.8
CLK1-203ENST00000409769 FRMD6-AS1P0C7T7 363 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 GNB3P16520 340 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 ZNF7P17097 686 aaPredicted RBP3.82□□□□□ -1.8
CLK1-203ENST00000409769 UGT1A6P19224 532 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 UGT1A4P22310 534 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 ATP5DP30049 168 aa3.82□□□□□ -1.8
CLK1-203ENST00000409769 OXTRP30559 389 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms