RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 MEN1O00255 615 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 PCDH17O14917 1159 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 MAGEB3O15480 346 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 PRKNO60260 465 aaPredicted RBP8.47□□□□□ -1.05
LIG4-202ENST00000405925 SYNGR4O95473 234 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 IL33O95760 270 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 OSMP13725 252 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 FASLGP48023 281 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 MEDAGQ5VYS4 303 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 CARD17Q5XLA6 110 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 TCEAL6Q6IPX3 200 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 ZNF793Q6ZN11 406 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 PRSS41Q7RTY9 318 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 TMPRSS9Q7Z410 1059 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 AMER3Q8N944 861 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 CYB561A3Q8NBI2 242 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 DUSP19Q8WTR2 217 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 TCEAL3Q969E4 200 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 OR2A5Q96R48 311 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 FAM60AQ9NP50 221 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 PRDM7Q9NQW5 492 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 PIKFYVEQ9Y2I7 2098 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 KCNE1BA0A087WTH5 132 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 H0YIG0 161 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 PRR35P0CG20 571 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 DNASE1L1P49184 302 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 NOVA1P51513 510 aaKnown RBP8.47□□□□□ -1.05
LIG4-202ENST00000405925 SRYQ05066 204 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 KIAA0040Q15053 153 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 YOD1Q5VVQ6 348 aaPredicted RBP8.47□□□□□ -1.05
LIG4-202ENST00000405925 PODNL1Q6PEZ8 512 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 VN1R4Q7Z5H5 301 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 CHERPQ8IWX8 916 aaKnown RBP8.47□□□□□ -1.05
LIG4-202ENST00000405925 IZUMO1Q8IYV9 350 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 OR52E2Q8NGJ4 325 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 OR51L1Q8NGJ5 315 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 NRG4Q8WWG1 115 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 AP3S1Q92572 193 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 HDAC2Q92769 488 aaKnown RBP8.47□□□□□ -1.05
LIG4-202ENST00000405925 PNPLA2Q96AD5 504 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 HHATLQ9HCP6 504 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 GALNT8Q9NY28 637 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 KCND3Q9UK17 655 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 C19orf53Q9UNZ5 99 aaPredicted RBP8.47□□□□□ -1.05
LIG4-202ENST00000405925 PCDHGB1Q9Y5G3 927 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 ACOT7O00154 380 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 DSCR3O14972 297 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 ZNF264O43296 627 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 ICAM2P13598 275 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 FUT1P19526 365 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 PAX7P23759 505 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 MVKQ03426 396 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 ULK3Q6PHR2 472 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 KRT77Q7Z794 578 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 PTRH1Q86Y79 214 aaKnown RBP8.47□□□□□ -1.05
LIG4-202ENST00000405925 LILRA2Q8N149 483 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 GALNT6Q8NCL4 622 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 KCNS3Q9BQ31 491 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 TMEM38AQ9H6F2 299 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 ACACAQ13085 2346 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 MIA3Q5JRA6 1907 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 M0R129 80 aa8.46□□□□□ -1.05
LIG4-202ENST00000405925 CKMT1AP12532 417 aa8.46□□□□□ -1.05
LIG4-202ENST00000405925 PRPH2P23942 346 aa8.46□□□□□ -1.05
LIG4-202ENST00000405925 TRHRP34981 398 aaPredicted RBP8.46□□□□□ -1.05
LIG4-202ENST00000405925 SLC3A1Q07837 685 aa8.46□□□□□ -1.05
LIG4-202ENST00000405925 AGERQ15109 404 aa8.46□□□□□ -1.05
LIG4-202ENST00000405925 OR1Q1Q15612 314 aa8.46□□□□□ -1.05
LIG4-202ENST00000405925 DUSP7Q16829 419 aa8.46□□□□□ -1.05
LIG4-202ENST00000405925 ODF4Q2M2E3 257 aa8.46□□□□□ -1.05
LIG4-202ENST00000405925 ZNF773Q6PK81 442 aa8.46□□□□□ -1.05
LIG4-202ENST00000405925 LINC00696Q6ZRV3 163 aa8.46□□□□□ -1.05
LIG4-202ENST00000405925 LHFPL3Q86UP9 236 aa8.46□□□□□ -1.05
LIG4-202ENST00000405925 YIPF7Q8N8F6 280 aa8.46□□□□□ -1.05
LIG4-202ENST00000405925 OR6T1Q8NGN1 323 aa8.46□□□□□ -1.05
LIG4-202ENST00000405925 BPIFA2Q96DR5 249 aa8.46□□□□□ -1.05
LIG4-202ENST00000405925 ZNF578Q96N58 590 aaPredicted RBP8.46□□□□□ -1.05
LIG4-202ENST00000405925 OR5B2Q96R09 309 aa8.46□□□□□ -1.05
LIG4-202ENST00000405925 SECISBP2Q96T21 854 aaKnown RBP8.46□□□□□ -1.05
LIG4-202ENST00000405925 PRR14Q9BWN1 585 aa8.46□□□□□ -1.05
LIG4-202ENST00000405925 CHST8Q9H2A9 424 aa8.46□□□□□ -1.05
LIG4-202ENST00000405925 PCYT1BQ9Y5K3 369 aaPredicted RBP8.46□□□□□ -1.05
LIG4-202ENST00000405925 CENPXA8MT69 81 aa8.46□□□□□ -1.06
LIG4-202ENST00000405925 LILRB5O75023 590 aa8.46□□□□□ -1.06
LIG4-202ENST00000405925 NDUFB2O95178 105 aa8.46□□□□□ -1.06
LIG4-202ENST00000405925 SPARCP09486 303 aa8.46□□□□□ -1.06
LIG4-202ENST00000405925 TACSTD2P09758 323 aa8.46□□□□□ -1.06
LIG4-202ENST00000405925 PNMTP11086 282 aa8.46□□□□□ -1.06
LIG4-202ENST00000405925 FOLR1P15328 257 aa8.46□□□□□ -1.06
LIG4-202ENST00000405925 TLE3Q04726 772 aa8.46□□□□□ -1.06
LIG4-202ENST00000405925 ITGADQ13349 1161 aa8.46□□□□□ -1.06
LIG4-202ENST00000405925 DSG2Q14126 1118 aa8.46□□□□□ -1.06
LIG4-202ENST00000405925 MAPK14Q16539 360 aa8.46□□□□□ -1.06
LIG4-202ENST00000405925 TSTQ16762 297 aaKnown RBP8.46□□□□□ -1.06
LIG4-202ENST00000405925 PRAMEF8Q5VWM4 474 aa8.46□□□□□ -1.06
LIG4-202ENST00000405925 PRAMEF7Q5VXH5 474 aa8.46□□□□□ -1.06
LIG4-202ENST00000405925 FCRLBQ6BAA4 426 aa8.46□□□□□ -1.06
LIG4-202ENST00000405925 ARHGAP11AQ6P4F7 1023 aa8.46□□□□□ -1.06
LIG4-202ENST00000405925 IGFN1Q86VF2 1251 aa8.46□□□□□ -1.06
LIG4-202ENST00000405925 GID4Q8IVV7 300 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms