RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 PPP1R42Q7Z4L9 355 aa2.98□□□□□ -1.93
HMGB1P17-201ENST00000403495 ANKRD37Q7Z713 158 aa2.98□□□□□ -1.93
HMGB1P17-201ENST00000403495 MYPOPQ86VE0 399 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P17-201ENST00000403495 TMEM17Q86X19 198 aa2.98□□□□□ -1.93
HMGB1P17-201ENST00000403495 ERICH1Q86X53 443 aa2.98□□□□□ -1.93
HMGB1P17-201ENST00000403495 GPR65Q8IYL9 337 aa2.98□□□□□ -1.93
HMGB1P17-201ENST00000403495 SLC38A6Q8IZM9 456 aa2.98□□□□□ -1.93
HMGB1P17-201ENST00000403495 Q8N9G6 341 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P17-201ENST00000403495 ZSCAN4Q8NAM6 433 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P17-201ENST00000403495 OR5L2Q8NGL0 311 aa2.98□□□□□ -1.93
HMGB1P17-201ENST00000403495 RHOXF1Q8NHV9 184 aa2.98□□□□□ -1.93
HMGB1P17-201ENST00000403495 GTSF1Q8WW33 167 aa2.98□□□□□ -1.93
HMGB1P17-201ENST00000403495 SDSLQ96GA7 329 aa2.98□□□□□ -1.93
HMGB1P17-201ENST00000403495 PSMB7Q99436 277 aa2.98□□□□□ -1.93
HMGB1P17-201ENST00000403495 GPA33Q99795 319 aa2.98□□□□□ -1.93
HMGB1P17-201ENST00000403495 ZSCAN5AQ9BUG6 496 aa2.98□□□□□ -1.93
HMGB1P17-201ENST00000403495 TSSK1BQ9BXA7 367 aa2.98□□□□□ -1.93
HMGB1P17-201ENST00000403495 IKZF5Q9H5V7 419 aa2.98□□□□□ -1.93
HMGB1P17-201ENST00000403495 COG4Q9H9E3 785 aa2.98□□□□□ -1.93
HMGB1P17-201ENST00000403495 EXOSC3Q9NQT5 275 aaKnown RBP2.98□□□□□ -1.93
HMGB1P17-201ENST00000403495 PAK1IP1Q9NWT1 392 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P17-201ENST00000403495 IMPAD1Q9NX62 359 aa2.98□□□□□ -1.93
HMGB1P17-201ENST00000403495 RNF6Q9Y252 685 aa2.98□□□□□ -1.93
HMGB1P17-201ENST00000403495 CSAG2Q9Y5P2 127 aa2.98□□□□□ -1.93
HMGB1P17-201ENST00000403495 GMPPBQ9Y5P6 360 aa2.98□□□□□ -1.93
HMGB1P17-201ENST00000403495 USP16Q9Y5T5 823 aa2.98□□□□□ -1.93
HMGB1P17-201ENST00000403495 ATP10DQ9P241 1426 aa2.98□□□□□ -1.93
HMGB1P17-201ENST00000403495 HCFC1P51610 2035 aa2.97□□□□□ -1.93
HMGB1P17-201ENST00000403495 USP6P35125 1406 aa2.97□□□□□ -1.93
HMGB1P17-201ENST00000403495 PPIAL4CA0A0B4J2A2 164 aa2.97□□□□□ -1.93
HMGB1P17-201ENST00000403495 GSAPA4D1B5 854 aa2.97□□□□□ -1.93
HMGB1P17-201ENST00000403495 PPIAL4DF5H284 164 aa2.97□□□□□ -1.93
HMGB1P17-201ENST00000403495 H3BMQ9 156 aa2.97□□□□□ -1.93
HMGB1P17-201ENST00000403495 CLDN5O00501 218 aa2.97□□□□□ -1.93
HMGB1P17-201ENST00000403495 BCAS1O75363 584 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P17-201ENST00000403495 MTX2O75431 263 aa2.97□□□□□ -1.93
HMGB1P17-201ENST00000403495 KIAA0754O94854 1291 aa2.97□□□□□ -1.93
HMGB1P17-201ENST00000403495 GJB5O95377 273 aa2.97□□□□□ -1.93
HMGB1P17-201ENST00000403495 OPN1LWP04000 364 aa2.97□□□□□ -1.93
HMGB1P17-201ENST00000403495 KRT8P05787 483 aa2.97□□□□□ -1.93
HMGB1P17-201ENST00000403495 PPIAL4GP0DN37 164 aa2.97□□□□□ -1.93
HMGB1P17-201ENST00000403495 HNF1AP20823 631 aa2.97□□□□□ -1.93
HMGB1P17-201ENST00000403495 ATP5A1P25705 553 aaKnown RBP2.97□□□□□ -1.93
HMGB1P17-201ENST00000403495 ADSSP30520 456 aa2.97□□□□□ -1.93
HMGB1P17-201ENST00000403495 HPCAL1P37235 193 aa2.97□□□□□ -1.93
HMGB1P17-201ENST00000403495 EMDP50402 254 aa2.97□□□□□ -1.93
HMGB1P17-201ENST00000403495 DSCR10P59022 87 aa2.97□□□□□ -1.93
HMGB1P17-201ENST00000403495 UBE2HP62256 183 aa2.97□□□□□ -1.93
HMGB1P17-201ENST00000403495 SERTAD2Q14140 314 aa2.97□□□□□ -1.93
HMGB1P17-201ENST00000403495 CYP51A1Q16850 503 aa2.97□□□□□ -1.93
HMGB1P17-201ENST00000403495 MAJINQ3KP22 176 aa2.97□□□□□ -1.93
HMGB1P17-201ENST00000403495 CCDC152Q4G0S7 254 aa2.97□□□□□ -1.93
HMGB1P17-201ENST00000403495 C10orf120Q5SQS8 335 aa2.97□□□□□ -1.93
HMGB1P17-201ENST00000403495 MEDAGQ5VYS4 303 aa2.97□□□□□ -1.93
HMGB1P17-201ENST00000403495 OR8G2PQ6IF36 304 aa2.97□□□□□ -1.93
HMGB1P17-201ENST00000403495 UFSP1Q6NVU6 142 aa2.97□□□□□ -1.93
HMGB1P17-201ENST00000403495 RGS9BPQ6ZS82 235 aa2.97□□□□□ -1.93
HMGB1P17-201ENST00000403495 CSNK1A1LQ8N752 337 aa2.97□□□□□ -1.93
HMGB1P17-201ENST00000403495 OR51G2Q8NGK0 314 aa2.97□□□□□ -1.93
HMGB1P17-201ENST00000403495 RAET1EQ8TD07 263 aa2.97□□□□□ -1.93
HMGB1P17-201ENST00000403495 TRUB1Q8WWH5 349 aaKnown RBP2.97□□□□□ -1.93
HMGB1P17-201ENST00000403495 PSMG2Q969U7 264 aa2.97□□□□□ -1.93
HMGB1P17-201ENST00000403495 TXN2Q99757 166 aa2.97□□□□□ -1.93
HMGB1P17-201ENST00000403495 GORASP2Q9H8Y8 452 aa2.97□□□□□ -1.93
HMGB1P17-201ENST00000403495 PNO1Q9NRX1 252 aaKnown RBP2.97□□□□□ -1.93
HMGB1P17-201ENST00000403495 SMPD3Q9NY59 655 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P17-201ENST00000403495 MRPL39Q9NYK5 338 aaKnown RBP2.97□□□□□ -1.93
HMGB1P17-201ENST00000403495 GNG12Q9UBI6 72 aa2.97□□□□□ -1.93
HMGB1P17-201ENST00000403495 CYTH4Q9UIA0 394 aa2.97□□□□□ -1.93
HMGB1P17-201ENST00000403495 CRLS1Q9UJA2 301 aa2.97□□□□□ -1.93
HMGB1P17-201ENST00000403495 EIF3LQ9Y262 564 aaKnown RBP2.97□□□□□ -1.93
HMGB1P17-201ENST00000403495 OR10H1Q9Y4A9 318 aa2.97□□□□□ -1.93
HMGB1P17-201ENST00000403495 CARMIL1Q5VZK9 1371 aa2.97□□□□□ -1.93
HMGB1P17-201ENST00000403495 METTL21EPA6NDL7 271 aa2.96□□□□□ -1.94
HMGB1P17-201ENST00000403495 OR6C65A6NJZ3 312 aa2.96□□□□□ -1.94
HMGB1P17-201ENST00000403495 GPR89AB7ZAQ6 455 aa2.96□□□□□ -1.94
HMGB1P17-201ENST00000403495 SLC17A2O00624 439 aa2.96□□□□□ -1.94
HMGB1P17-201ENST00000403495 ZNF254O75437 659 aa2.96□□□□□ -1.94
HMGB1P17-201ENST00000403495 SCRG1O75711 98 aa2.96□□□□□ -1.94
HMGB1P17-201ENST00000403495 ALOX5P09917 674 aa2.96□□□□□ -1.94
HMGB1P17-201ENST00000403495 GPR89BP0CG08 455 aa2.96□□□□□ -1.94
HMGB1P17-201ENST00000403495 PGAM2P15259 253 aa2.96□□□□□ -1.94
HMGB1P17-201ENST00000403495 H2AFXP16104 143 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P17-201ENST00000403495 NT5EP21589 574 aa2.96□□□□□ -1.94
HMGB1P17-201ENST00000403495 CHI3L1P36222 383 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P17-201ENST00000403495 PRPHP41219 470 aa2.96□□□□□ -1.94
HMGB1P17-201ENST00000403495 LMO4P61968 165 aa2.96□□□□□ -1.94
HMGB1P17-201ENST00000403495 BDH1Q02338 343 aa2.96□□□□□ -1.94
HMGB1P17-201ENST00000403495 TPD52L1Q16890 204 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P17-201ENST00000403495 TIGITQ495A1 244 aa2.96□□□□□ -1.94
HMGB1P17-201ENST00000403495 HIGD2BQ4VC39 106 aa2.96□□□□□ -1.94
HMGB1P17-201ENST00000403495 TEX44Q53QW1 395 aa2.96□□□□□ -1.94
HMGB1P17-201ENST00000403495 KRTAP5-11Q6L8G4 156 aa2.96□□□□□ -1.94
HMGB1P17-201ENST00000403495 LRRC70Q7Z2Q7 622 aa2.96□□□□□ -1.94
HMGB1P17-201ENST00000403495 ACOT1Q86TX2 421 aa2.96□□□□□ -1.94
HMGB1P17-201ENST00000403495 LCA5Q86VQ0 697 aa2.96□□□□□ -1.94
HMGB1P17-201ENST00000403495 IFNEQ86WN2 208 aa2.96□□□□□ -1.94
HMGB1P17-201ENST00000403495 OR9A4Q8NGU2 314 aa2.96□□□□□ -1.94
HMGB1P17-201ENST00000403495 CCDC26Q8TAB7 109 aa2.96□□□□□ -1.94
HMGB1P17-201ENST00000403495 SPRYD4Q8WW59 207 aaPredicted RBP2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms