RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 AGFG1P52594 562 aaKnown RBP18.49■□□□□ 0.55
CCDC47-202ENST00000403162 ATP12AP54707 1039 aa18.49■□□□□ 0.55
CCDC47-202ENST00000403162 MRPL28Q13084 256 aaKnown RBP18.49■□□□□ 0.55
CCDC47-202ENST00000403162 HNRNPA1L2Q32P51 320 aaKnown RBP18.49■□□□□ 0.55
CCDC47-202ENST00000403162 BICRALQ6AI39 1079 aa18.49■□□□□ 0.55
CCDC47-202ENST00000403162 KLBQ86Z14 1044 aa18.49■□□□□ 0.55
CCDC47-202ENST00000403162 BBS1Q8NFJ9 593 aa18.49■□□□□ 0.55
CCDC47-202ENST00000403162 WACQ9BTA9 647 aa18.49■□□□□ 0.55
CCDC47-202ENST00000403162 KCNN2Q9H2S1 579 aa18.49■□□□□ 0.55
CCDC47-202ENST00000403162 DIABLOQ9NR28 239 aa18.49■□□□□ 0.55
CCDC47-202ENST00000403162 CYSLTR2Q9NS75 346 aa18.49■□□□□ 0.55
CCDC47-202ENST00000403162 TNFRSF10DQ9UBN6 386 aa18.49■□□□□ 0.55
CCDC47-202ENST00000403162 EXTL2Q9UBQ6 330 aa18.49■□□□□ 0.55
CCDC47-202ENST00000403162 CHST2Q9Y4C5 530 aa18.49■□□□□ 0.55
CCDC47-202ENST00000403162 COL4A2P08572 1712 aa18.49■□□□□ 0.55
CCDC47-202ENST00000403162 IGKV1-8A0A0C4DH67 115 aa18.49■□□□□ 0.55
CCDC47-202ENST00000403162 EDDM13A0A1B0GTR0 161 aa18.49■□□□□ 0.55
CCDC47-202ENST00000403162 GTPBP1O00178 669 aaKnown RBP18.49■□□□□ 0.55
CCDC47-202ENST00000403162 PGRMC2O15173 223 aa18.49■□□□□ 0.55
CCDC47-202ENST00000403162 PLOD3O60568 738 aa18.49■□□□□ 0.55
CCDC47-202ENST00000403162 ALPPL2P10696 532 aa18.49■□□□□ 0.55
CCDC47-202ENST00000403162 EVI2BP34910 448 aa18.49■□□□□ 0.55
CCDC47-202ENST00000403162 PRR5P85299 388 aa18.49■□□□□ 0.55
CCDC47-202ENST00000403162 CSTF1Q05048 431 aaKnown RBP18.49■□□□□ 0.55
CCDC47-202ENST00000403162 DUSP2Q05923 314 aa18.49■□□□□ 0.55
CCDC47-202ENST00000403162 ZIC1Q15915 447 aa18.49■□□□□ 0.55
CCDC47-202ENST00000403162 MRM1Q6IN84 353 aaKnown RBP18.49■□□□□ 0.55
CCDC47-202ENST00000403162 TMEM107Q6UX40 140 aa18.49■□□□□ 0.55
CCDC47-202ENST00000403162 ADCK2Q7Z695 626 aa18.49■□□□□ 0.55
CCDC47-202ENST00000403162 LRRC28Q86X40 367 aaPredicted RBP18.49■□□□□ 0.55
CCDC47-202ENST00000403162 CCDC116Q8IYX3 515 aa18.49■□□□□ 0.55
CCDC47-202ENST00000403162 SLC37A3Q8NCC5 494 aa18.49■□□□□ 0.55
CCDC47-202ENST00000403162 OR5M3Q8NGP4 307 aa18.49■□□□□ 0.55
CCDC47-202ENST00000403162 KLK6Q92876 244 aa18.49■□□□□ 0.55
CCDC47-202ENST00000403162 HYLS1Q96M11 299 aa18.49■□□□□ 0.55
CCDC47-202ENST00000403162 GFM1Q96RP9 751 aaKnown RBP18.49■□□□□ 0.55
CCDC47-202ENST00000403162 KLHL31Q9H511 634 aa18.49■□□□□ 0.55
CCDC47-202ENST00000403162 FOLH1BQ9HBA9 442 aa18.49■□□□□ 0.55
CCDC47-202ENST00000403162 POLMQ9NP87 494 aaPredicted RBP18.49■□□□□ 0.55
CCDC47-202ENST00000403162 A0A1W2PR48 441 aa18.48■□□□□ 0.55
CCDC47-202ENST00000403162 EMC8O43402 210 aa18.48■□□□□ 0.55
CCDC47-202ENST00000403162 RNF13O43567 381 aa18.48■□□□□ 0.55
CCDC47-202ENST00000403162 EGFP01133 1207 aa18.48■□□□□ 0.55
CCDC47-202ENST00000403162 HMGN1P05114 100 aa18.48■□□□□ 0.55
CCDC47-202ENST00000403162 PRKAR1BP31321 381 aa18.48■□□□□ 0.55
CCDC47-202ENST00000403162 WASP42768 502 aa18.48■□□□□ 0.55
CCDC47-202ENST00000403162 PRDX1Q06830 199 aaKnown RBP18.48■□□□□ 0.55
CCDC47-202ENST00000403162 TGM3Q08188 693 aa18.48■□□□□ 0.55
CCDC47-202ENST00000403162 GPR176Q14439 515 aa18.48■□□□□ 0.55
CCDC47-202ENST00000403162 FAM214AQ32MH5 1076 aa18.48■□□□□ 0.55
CCDC47-202ENST00000403162 HBMQ6B0K9 141 aa18.48■□□□□ 0.55
CCDC47-202ENST00000403162 NR2C2APQ86WQ0 139 aa18.48■□□□□ 0.55
CCDC47-202ENST00000403162 NKAIN4Q8IVV8 208 aa18.48■□□□□ 0.55
CCDC47-202ENST00000403162 OR4M2Q8NGB6 313 aa18.48■□□□□ 0.55
CCDC47-202ENST00000403162 SLC2A4RGQ9NR83 387 aa18.48■□□□□ 0.55
CCDC47-202ENST00000403162 TM7SF3Q9NS93 570 aa18.48■□□□□ 0.55
CCDC47-202ENST00000403162 ENTPD4Q9Y227 616 aa18.48■□□□□ 0.55
CCDC47-202ENST00000403162 DNMT3AQ9Y6K1 912 aaPredicted RBP18.48■□□□□ 0.55
CCDC47-202ENST00000403162 ATP6V1E1P36543 226 aa18.48■□□□□ 0.55
CCDC47-202ENST00000403162 GPR4P46093 362 aa18.48■□□□□ 0.55
CCDC47-202ENST00000403162 OR3A3P47888 321 aa18.48■□□□□ 0.55
CCDC47-202ENST00000403162 ZNF750Q32MQ0 723 aa18.48■□□□□ 0.55
CCDC47-202ENST00000403162 PLA1AQ53H76 456 aa18.48■□□□□ 0.55
CCDC47-202ENST00000403162 TMEM196Q5HYL7 178 aa18.48■□□□□ 0.55
CCDC47-202ENST00000403162 SMARCD3Q6STE5 483 aa18.48■□□□□ 0.55
CCDC47-202ENST00000403162 MBOAT2Q6ZWT7 520 aa18.48■□□□□ 0.55
CCDC47-202ENST00000403162 SIRT6Q8N6T7 355 aa18.48■□□□□ 0.55
CCDC47-202ENST00000403162 OR2T33Q8NG76 320 aa18.48■□□□□ 0.55
CCDC47-202ENST00000403162 KCTD12Q96CX2 325 aaKnown RBP18.48■□□□□ 0.55
CCDC47-202ENST00000403162 ZG16BQ96DA0 208 aa18.48■□□□□ 0.55
CCDC47-202ENST00000403162 HDHD2Q9H0R4 259 aa18.48■□□□□ 0.55
CCDC47-202ENST00000403162 KLHL28Q9NXS3 571 aa18.48■□□□□ 0.55
CCDC47-202ENST00000403162 H2AFY2Q9P0M6 372 aaPredicted RBP18.48■□□□□ 0.55
CCDC47-202ENST00000403162 ATG4BQ9Y4P1 393 aa18.48■□□□□ 0.55
CCDC47-202ENST00000403162 HSPB11Q9Y547 144 aa18.48■□□□□ 0.55
CCDC47-202ENST00000403162 STON1Q9Y6Q2 735 aa18.48■□□□□ 0.55
CCDC47-202ENST00000403162 MUC22E2RYF6 1773 aaPredicted RBP18.48■□□□□ 0.55
CCDC47-202ENST00000403162 C4orf51C9J302 202 aa18.47■□□□□ 0.55
CCDC47-202ENST00000403162 SMLR1H3BR10 107 aa18.47■□□□□ 0.55
CCDC47-202ENST00000403162 SLC35G4P0C7Q5 338 aa18.47■□□□□ 0.55
CCDC47-202ENST00000403162 HIST1H1TP22492 207 aaPredicted RBP18.47■□□□□ 0.55
CCDC47-202ENST00000403162 SNRPD2P62316 118 aaKnown RBP18.47■□□□□ 0.55
CCDC47-202ENST00000403162 ELAVL3Q14576 367 aaKnown RBP18.47■□□□□ 0.55
CCDC47-202ENST00000403162 C6orf132Q5T0Z8 1188 aa18.47■□□□□ 0.55
CCDC47-202ENST00000403162 PLEKHM3Q6ZWE6 761 aa18.47■□□□□ 0.55
CCDC47-202ENST00000403162 FAM109AQ8N4B1 249 aa18.47■□□□□ 0.55
CCDC47-202ENST00000403162 RAB42Q8N4Z0 105 aa18.47■□□□□ 0.55
CCDC47-202ENST00000403162 CXorf40AQ8TE69 158 aa18.47■□□□□ 0.55
CCDC47-202ENST00000403162 HINT3Q9NQE9 182 aaKnown RBP18.47■□□□□ 0.55
CCDC47-202ENST00000403162 MRPL39Q9NYK5 338 aaKnown RBP18.47■□□□□ 0.55
CCDC47-202ENST00000403162 PTGFRNQ9P2B2 879 aa18.47■□□□□ 0.55
CCDC47-202ENST00000403162 CES1P1Q9UKY3 287 aa18.47■□□□□ 0.55
CCDC47-202ENST00000403162 CSNK1G3Q9Y6M4 447 aa18.47■□□□□ 0.55
CCDC47-202ENST00000403162 SOCS6O14544 535 aa18.47■□□□□ 0.55
CCDC47-202ENST00000403162 OR5F1O95221 314 aa18.47■□□□□ 0.55
CCDC47-202ENST00000403162 SLC2A10O95528 541 aa18.47■□□□□ 0.55
CCDC47-202ENST00000403162 AIFM1O95831 613 aa18.47■□□□□ 0.55
CCDC47-202ENST00000403162 GLULP15104 373 aa18.47■□□□□ 0.55
CCDC47-202ENST00000403162 CSNK2A2P19784 350 aaPredicted RBP18.47■□□□□ 0.55
CCDC47-202ENST00000403162 PKLRP30613 574 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms