RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 AGAP20933 346 aa17.44■□□□□ 0.38
RTN4-207ENST00000402434 CASP9P55211 416 aa17.44■□□□□ 0.38
RTN4-207ENST00000402434 TXNL4AP83876 142 aaKnown RBP17.44■□□□□ 0.38
RTN4-207ENST00000402434 STX5Q13190 355 aa17.44■□□□□ 0.38
RTN4-207ENST00000402434 GANABQ14697 944 aaKnown RBP17.44■□□□□ 0.38
RTN4-207ENST00000402434 RTL6Q6ICC9 239 aa17.44■□□□□ 0.38
RTN4-207ENST00000402434 TMEM211Q6ICI0 200 aa17.44■□□□□ 0.38
RTN4-207ENST00000402434 ZNF585AQ6P3V2 769 aa17.44■□□□□ 0.38
RTN4-207ENST00000402434 TNFAIP8L2Q6P589 184 aaPredicted RBP17.44■□□□□ 0.38
RTN4-207ENST00000402434 XKRXQ6PP77 449 aa17.44■□□□□ 0.38
RTN4-207ENST00000402434 MRGPRGQ86SM5 289 aa17.44■□□□□ 0.38
RTN4-207ENST00000402434 MARVELD2Q8N4S9 558 aa17.44■□□□□ 0.38
RTN4-207ENST00000402434 ZNF808Q8N4W9 903 aaPredicted RBP17.44■□□□□ 0.38
RTN4-207ENST00000402434 XAGE5Q8WWM1 108 aa17.44■□□□□ 0.38
RTN4-207ENST00000402434 GTF2H4Q92759 462 aa17.44■□□□□ 0.38
RTN4-207ENST00000402434 ABTB1Q969K4 478 aaPredicted RBP17.44■□□□□ 0.38
RTN4-207ENST00000402434 ITCHQ96J02 903 aa17.44■□□□□ 0.38
RTN4-207ENST00000402434 UGT2B28Q9BY64 529 aa17.44■□□□□ 0.38
RTN4-207ENST00000402434 PRDM14Q9GZV8 571 aa17.44■□□□□ 0.38
RTN4-207ENST00000402434 PTGES2Q9H7Z7 377 aa17.44■□□□□ 0.38
RTN4-207ENST00000402434 SLC52A3Q9NQ40 469 aa17.44■□□□□ 0.38
RTN4-207ENST00000402434 FAM215AQ9Y5M1 114 aa17.44■□□□□ 0.38
RTN4-207ENST00000402434 PHF3Q92576 2039 aaKnown RBP17.43■□□□□ 0.38
RTN4-207ENST00000402434 CLDN1O95832 211 aa17.43■□□□□ 0.38
RTN4-207ENST00000402434 OR12D1P0DN82 309 aa17.43■□□□□ 0.38
RTN4-207ENST00000402434 SMSP52788 366 aa17.43■□□□□ 0.38
RTN4-207ENST00000402434 ATP12AP54707 1039 aa17.43■□□□□ 0.38
RTN4-207ENST00000402434 SQLEQ14534 574 aa17.43■□□□□ 0.38
RTN4-207ENST00000402434 FLYWCH1Q4VC44 716 aa17.43■□□□□ 0.38
RTN4-207ENST00000402434 METTL21CQ5VZV1 264 aa17.43■□□□□ 0.38
RTN4-207ENST00000402434 NCCRP1Q6ZVX7 275 aaPredicted RBP17.43■□□□□ 0.38
RTN4-207ENST00000402434 IFNEQ86WN2 208 aa17.43■□□□□ 0.38
RTN4-207ENST00000402434 RNF130Q86XS8 419 aa17.43■□□□□ 0.38
RTN4-207ENST00000402434 MISPQ8IVT2 679 aa17.43■□□□□ 0.38
RTN4-207ENST00000402434 PM20D2Q8IYS1 436 aa17.43■□□□□ 0.38
RTN4-207ENST00000402434 ULK2Q8IYT8 1036 aa17.43■□□□□ 0.38
RTN4-207ENST00000402434 RPRMLQ8N4K4 120 aa17.43■□□□□ 0.38
RTN4-207ENST00000402434 ZNF527Q8NB42 609 aa17.43■□□□□ 0.38
RTN4-207ENST00000402434 ZFP90Q8TF47 636 aa17.43■□□□□ 0.38
RTN4-207ENST00000402434 RAB8BQ92930 207 aa17.43■□□□□ 0.38
RTN4-207ENST00000402434 C1GALT1C1Q96EU7 318 aa17.43■□□□□ 0.38
RTN4-207ENST00000402434 NMUR2Q9GZQ4 415 aa17.43■□□□□ 0.38
RTN4-207ENST00000402434 ZNF350Q9GZX5 532 aa17.43■□□□□ 0.38
RTN4-207ENST00000402434 RABEP2Q9H5N1 569 aa17.43■□□□□ 0.38
RTN4-207ENST00000402434 ZNF385DQ9H6B1 395 aa17.43■□□□□ 0.38
RTN4-207ENST00000402434 FGFR1OP2Q9NVK5 253 aa17.43■□□□□ 0.38
RTN4-207ENST00000402434 CCDC167Q9P0B6 97 aa17.43■□□□□ 0.38
RTN4-207ENST00000402434 DKKL1Q9UK85 242 aa17.43■□□□□ 0.38
RTN4-207ENST00000402434 TRIM33Q9UPN9 1127 aa17.43■□□□□ 0.38
RTN4-207ENST00000402434 SETXQ7Z333 2677 aaKnown RBP17.42■□□□□ 0.38
RTN4-207ENST00000402434 A0A0G2JND7 137 aa17.42■□□□□ 0.38
RTN4-207ENST00000402434 AHRRA9YTQ3 701 aa17.42■□□□□ 0.38
RTN4-207ENST00000402434 HMGN4O00479 90 aa17.42■□□□□ 0.38
RTN4-207ENST00000402434 FCMRO60667 390 aa17.42■□□□□ 0.38
RTN4-207ENST00000402434 STX11O75558 287 aa17.42■□□□□ 0.38
RTN4-207ENST00000402434 KRT75O95678 551 aa17.42■□□□□ 0.38
RTN4-207ENST00000402434 CPN1P15169 458 aa17.42■□□□□ 0.38
RTN4-207ENST00000402434 CHMP24386 653 aa17.42■□□□□ 0.38
RTN4-207ENST00000402434 MSX1P28360 303 aa17.42■□□□□ 0.38
RTN4-207ENST00000402434 PTGER4P35408 488 aa17.42■□□□□ 0.38
RTN4-207ENST00000402434 GCKP35557 465 aa17.42■□□□□ 0.38
RTN4-207ENST00000402434 DCTP40126 519 aa17.42■□□□□ 0.38
RTN4-207ENST00000402434 MDH1P40925 334 aaKnown RBP17.42■□□□□ 0.38
RTN4-207ENST00000402434 MAGEA8P43361 318 aa17.42■□□□□ 0.38
RTN4-207ENST00000402434 KHKP50053 298 aa17.42■□□□□ 0.38
RTN4-207ENST00000402434 CD226Q15762 336 aa17.42■□□□□ 0.38
RTN4-207ENST00000402434 DCST1Q5T197 706 aa17.42■□□□□ 0.38
RTN4-207ENST00000402434 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.42■□□□□ 0.38
RTN4-207ENST00000402434 ATAD3BQ5T9A4 648 aa17.42■□□□□ 0.38
RTN4-207ENST00000402434 MAMDC2Q7Z304 686 aaPredicted RBP17.42■□□□□ 0.38
RTN4-207ENST00000402434 C16orf62Q7Z3J2 963 aa17.42■□□□□ 0.38
RTN4-207ENST00000402434 MTERF4Q7Z6M4 381 aaKnown RBP17.42■□□□□ 0.38
RTN4-207ENST00000402434 WDYHV1Q96HA8 205 aa17.42■□□□□ 0.38
RTN4-207ENST00000402434 TTYH2Q9BSA4 534 aa17.42■□□□□ 0.38
RTN4-207ENST00000402434 SAP130Q9H0E3 1048 aa17.42■□□□□ 0.38
RTN4-207ENST00000402434 POLE3Q9NRF9 147 aa17.42■□□□□ 0.38
RTN4-207ENST00000402434 PLEKHB1Q9UF11 243 aaPredicted RBP17.42■□□□□ 0.38
RTN4-207ENST00000402434 MVDP53602 400 aa17.41■□□□□ 0.38
RTN4-207ENST00000402434 B3GALT5-AS1P59052 145 aa17.41■□□□□ 0.38
RTN4-207ENST00000402434 ZNF141Q15928 474 aa17.41■□□□□ 0.38
RTN4-207ENST00000402434 GLYR1Q49A26 553 aaPredicted RBP17.41■□□□□ 0.38
RTN4-207ENST00000402434 AAGABQ6PD74 315 aa17.41■□□□□ 0.38
RTN4-207ENST00000402434 B3GNT6Q6ZMB0 384 aa17.41■□□□□ 0.38
RTN4-207ENST00000402434 SPDL1Q96EA4 605 aa17.41■□□□□ 0.38
RTN4-207ENST00000402434 ALKBH4Q9NXW9 302 aa17.41■□□□□ 0.38
RTN4-207ENST00000402434 KCNE5Q9UJ90 142 aa17.41■□□□□ 0.38
RTN4-207ENST00000402434 DTNAQ9Y4J8 743 aa17.41■□□□□ 0.38
RTN4-207ENST00000402434 NPIPA5A0A0B4J1W7 369 aa17.4■□□□□ 0.38
RTN4-207ENST00000402434 A1L4Q6 167 aa17.4■□□□□ 0.38
RTN4-207ENST00000402434 PRAMEF27A3QJZ7 478 aa17.4■□□□□ 0.38
RTN4-207ENST00000402434 NPIPA7E9PJI5 369 aa17.4■□□□□ 0.38
RTN4-207ENST00000402434 NPIPA8P0DM63 369 aa17.4■□□□□ 0.38
RTN4-207ENST00000402434 TROVE2P10155 538 aaKnown RBP eCLIP17.4■□□□□ 0.38
RTN4-207ENST00000402434 GP1BBP13224 206 aa17.4■□□□□ 0.38
RTN4-207ENST00000402434 HOXB9P17482 250 aaPredicted RBP17.4■□□□□ 0.38
RTN4-207ENST00000402434 NCF2P19878 526 aaPredicted RBP17.4■□□□□ 0.38
RTN4-207ENST00000402434 ANXA11P50995 505 aaKnown RBP17.4■□□□□ 0.38
RTN4-207ENST00000402434 PMPCAQ10713 525 aa17.4■□□□□ 0.38
RTN4-207ENST00000402434 FUT5Q11128 374 aa17.4■□□□□ 0.38
RTN4-207ENST00000402434 ART3Q13508 389 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms