RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 RPS19BP1Q86WX3 136 aaKnown RBP19.48■□□□□ 0.71
CPNE1-204ENST00000397443 TMEM102Q8N9M5 508 aaPredicted RBP19.48■□□□□ 0.71
CPNE1-204ENST00000397443 OR6T1Q8NGN1 323 aa19.48■□□□□ 0.71
CPNE1-204ENST00000397443 SLC22A8Q8TCC7 542 aa19.48■□□□□ 0.71
CPNE1-204ENST00000397443 APOBEC4Q8WW27 367 aaKnown RBP19.48■□□□□ 0.71
CPNE1-204ENST00000397443 FGF11Q92914 225 aa19.48■□□□□ 0.71
CPNE1-204ENST00000397443 KLHL28Q9NXS3 571 aa19.48■□□□□ 0.71
CPNE1-204ENST00000397443 C6orf203Q9P0P8 240 aaPredicted RBP19.48■□□□□ 0.71
CPNE1-204ENST00000397443 U3KQV3 271 aa19.48■□□□□ 0.71
CPNE1-204ENST00000397443 SCDO00767 359 aa19.47■□□□□ 0.71
CPNE1-204ENST00000397443 CLOCKO15516 846 aa19.47■□□□□ 0.71
CPNE1-204ENST00000397443 UBTFL6P0CB48 400 aaPredicted RBP19.47■□□□□ 0.71
CPNE1-204ENST00000397443 ITGA3P26006 1051 aa19.47■□□□□ 0.71
CPNE1-204ENST00000397443 SOX3P41225 446 aa19.47■□□□□ 0.71
CPNE1-204ENST00000397443 ID4P47928 161 aa19.47■□□□□ 0.71
CPNE1-204ENST00000397443 IST1P53990 364 aa19.47■□□□□ 0.71
CPNE1-204ENST00000397443 KCNC4Q03721 635 aa19.47■□□□□ 0.71
CPNE1-204ENST00000397443 ATP6AP1Q15904 470 aa19.47■□□□□ 0.71
CPNE1-204ENST00000397443 ZNF141Q15928 474 aa19.47■□□□□ 0.71
CPNE1-204ENST00000397443 APOOLQ6UXV4 268 aa19.47■□□□□ 0.71
CPNE1-204ENST00000397443 KCNE4Q8WWG9 221 aa19.47■□□□□ 0.71
CPNE1-204ENST00000397443 IP6K3Q96PC2 410 aa19.47■□□□□ 0.71
CPNE1-204ENST00000397443 RHCGQ9UBD6 479 aa19.47■□□□□ 0.71
CPNE1-204ENST00000397443 ACACAQ13085 2346 aa19.47■□□□□ 0.71
CPNE1-204ENST00000397443 LAMA5O15230 3695 aa19.47■□□□□ 0.71
CPNE1-204ENST00000397443 ARGFXA6NJG6 315 aa19.47■□□□□ 0.71
CPNE1-204ENST00000397443 SAC3D1A6NKF1 404 aa19.47■□□□□ 0.71
CPNE1-204ENST00000397443 KLK10O43240 276 aa19.47■□□□□ 0.71
CPNE1-204ENST00000397443 TLX3O43711 291 aaPredicted RBP19.47■□□□□ 0.71
CPNE1-204ENST00000397443 PNLIPRP2P54317 469 aa19.47■□□□□ 0.71
CPNE1-204ENST00000397443 RGS8P57771 180 aaPredicted RBP19.47■□□□□ 0.71
CPNE1-204ENST00000397443 EIPR1Q53HC9 387 aa19.47■□□□□ 0.71
CPNE1-204ENST00000397443 SLC5A8Q8N695 610 aa19.47■□□□□ 0.71
CPNE1-204ENST00000397443 ZNF527Q8NB42 609 aa19.47■□□□□ 0.71
CPNE1-204ENST00000397443 NRG4Q8WWG1 115 aa19.47■□□□□ 0.71
CPNE1-204ENST00000397443 CNOT9Q92600 299 aaKnown RBP19.47■□□□□ 0.71
CPNE1-204ENST00000397443 PMM1Q92871 262 aa19.47■□□□□ 0.71
CPNE1-204ENST00000397443 STOML1Q9UBI4 398 aa19.47■□□□□ 0.71
CPNE1-204ENST00000397443 MSRB2Q9Y3D2 182 aa19.47■□□□□ 0.71
CPNE1-204ENST00000397443 FAM32AQ9Y421 112 aaKnown RBP19.47■□□□□ 0.71
CPNE1-204ENST00000397443 TESMINQ9Y4I5 508 aa19.47■□□□□ 0.71
CPNE1-204ENST00000397443 DTNAQ9Y4J8 743 aa19.47■□□□□ 0.71
CPNE1-204ENST00000397443 CDHR4A6H8M9 788 aa19.46■□□□□ 0.71
CPNE1-204ENST00000397443 C17orf51A8MQB3 221 aa19.46■□□□□ 0.71
CPNE1-204ENST00000397443 SCO2O43819 266 aa19.46■□□□□ 0.71
CPNE1-204ENST00000397443 GMFGO60234 142 aa19.46■□□□□ 0.71
CPNE1-204ENST00000397443 DEAF1O75398 565 aaPredicted RBP19.46■□□□□ 0.71
CPNE1-204ENST00000397443 OR6B1O95007 311 aa19.46■□□□□ 0.71
CPNE1-204ENST00000397443 GUSBP08236 651 aa19.46■□□□□ 0.71
CPNE1-204ENST00000397443 PEX2P28328 305 aa19.46■□□□□ 0.71
CPNE1-204ENST00000397443 RAPSNQ13702 412 aa19.46■□□□□ 0.71
CPNE1-204ENST00000397443 CD226Q15762 336 aa19.46■□□□□ 0.71
CPNE1-204ENST00000397443 IQCCQ4KMZ1 466 aa19.46■□□□□ 0.71
CPNE1-204ENST00000397443 IRAK1BP1Q5VVH5 260 aa19.46■□□□□ 0.71
CPNE1-204ENST00000397443 MARCH3Q86UD3 253 aa19.46■□□□□ 0.71
CPNE1-204ENST00000397443 CLEC1AQ8NC01 280 aa19.46■□□□□ 0.71
CPNE1-204ENST00000397443 PHOSPHO1Q8TCT1 267 aa19.46■□□□□ 0.71
CPNE1-204ENST00000397443 ZNF300Q96RE9 604 aaPredicted RBP19.46■□□□□ 0.71
CPNE1-204ENST00000397443 HOXD1Q9GZZ0 328 aa19.46■□□□□ 0.71
CPNE1-204ENST00000397443 ST6GALNAC1Q9NSC7 600 aaPredicted RBP19.46■□□□□ 0.71
CPNE1-204ENST00000397443 ANKRD10Q9NXR5 420 aa19.46■□□□□ 0.71
CPNE1-204ENST00000397443 NTNG1Q9Y2I2 539 aa19.46■□□□□ 0.71
CPNE1-204ENST00000397443 EXPH5Q8NEV8 1989 aa19.46■□□□□ 0.7
CPNE1-204ENST00000397443 SERINC4A6NH21 518 aa19.45■□□□□ 0.7
CPNE1-204ENST00000397443 OR6C70A6NIJ9 312 aa19.45■□□□□ 0.7
CPNE1-204ENST00000397443 SYT5O00445 386 aa19.45■□□□□ 0.7
CPNE1-204ENST00000397443 CSTAP01040 98 aa19.45■□□□□ 0.7
CPNE1-204ENST00000397443 PRG2P13727 222 aa19.45■□□□□ 0.7
CPNE1-204ENST00000397443 PLA2G5P39877 138 aa19.45■□□□□ 0.7
CPNE1-204ENST00000397443 PTDSS1P48651 473 aaKnown RBP19.45■□□□□ 0.7
CPNE1-204ENST00000397443 PLAURQ03405 335 aa19.45■□□□□ 0.7
CPNE1-204ENST00000397443 FGFBP1Q14512 234 aa19.45■□□□□ 0.7
CPNE1-204ENST00000397443 NPTX1Q15818 432 aa19.45■□□□□ 0.7
CPNE1-204ENST00000397443 NRF1Q16656 503 aa19.45■□□□□ 0.7
CPNE1-204ENST00000397443 KLHL26Q53HC5 615 aa19.45■□□□□ 0.7
CPNE1-204ENST00000397443 RNF220Q5VTB9 566 aa19.45■□□□□ 0.7
CPNE1-204ENST00000397443 AP1ARQ63HQ0 302 aa19.45■□□□□ 0.7
CPNE1-204ENST00000397443 OR2T5Q6IEZ7 315 aa19.45■□□□□ 0.7
CPNE1-204ENST00000397443 IL20RBQ6UXL0 311 aa19.45■□□□□ 0.7
CPNE1-204ENST00000397443 LSRQ86X29 649 aaPredicted RBP19.45■□□□□ 0.7
CPNE1-204ENST00000397443 OR10G3Q8NGC4 313 aa19.45■□□□□ 0.7
CPNE1-204ENST00000397443 OR2T29Q8NH02 315 aa19.45■□□□□ 0.7
CPNE1-204ENST00000397443 CENPNQ96H22 339 aaPredicted RBP19.45■□□□□ 0.7
CPNE1-204ENST00000397443 TBL1XR1Q9BZK7 514 aa19.45■□□□□ 0.7
CPNE1-204ENST00000397443 RTN4RQ9BZR6 473 aa19.45■□□□□ 0.7
CPNE1-204ENST00000397443 ARMC7Q9H6L4 198 aa19.45■□□□□ 0.7
CPNE1-204ENST00000397443 ATP13A2Q9NQ11 1180 aa19.45■□□□□ 0.7
CPNE1-204ENST00000397443 VNN3Q9NY84 501 aa19.45■□□□□ 0.7
CPNE1-204ENST00000397443 DNAJB9Q9UBS3 223 aa19.45■□□□□ 0.7
CPNE1-204ENST00000397443 ENPP4Q9Y6X5 453 aa19.45■□□□□ 0.7
CPNE1-204ENST00000397443 CFAP47Q6ZTR5 3102 aa19.45■□□□□ 0.7
CPNE1-204ENST00000397443 SEMA7AO75326 666 aa19.45■□□□□ 0.7
CPNE1-204ENST00000397443 ITGA2P17301 1181 aa19.45■□□□□ 0.7
CPNE1-204ENST00000397443 TBXA2RP21731 343 aa19.45■□□□□ 0.7
CPNE1-204ENST00000397443 SSR4P51571 173 aa19.45■□□□□ 0.7
CPNE1-204ENST00000397443 MLF1P58340 268 aa19.45■□□□□ 0.7
CPNE1-204ENST00000397443 BICRALQ6AI39 1079 aa19.45■□□□□ 0.7
CPNE1-204ENST00000397443 LYPD8Q6UX82 237 aa19.45■□□□□ 0.7
CPNE1-204ENST00000397443 PIWIL3Q7Z3Z3 882 aaKnown RBP19.45■□□□□ 0.7
CPNE1-204ENST00000397443 TMEM156Q8N614 296 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms