RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 TFAP2EQ6VUC0 442 aa13.7□□□□□ -0.22
CHMP3-202ENST00000393773 ATG4DQ86TL0 474 aaPredicted RBP13.7□□□□□ -0.22
CHMP3-202ENST00000393773 STK32CQ86UX6 486 aa13.7□□□□□ -0.22
CHMP3-202ENST00000393773 HIPK1Q86Z02 1210 aa13.7□□□□□ -0.22
CHMP3-202ENST00000393773 RELL1Q8IUW5 271 aa13.7□□□□□ -0.22
CHMP3-202ENST00000393773 WDR75Q8IWA0 830 aaKnown RBP13.7□□□□□ -0.22
CHMP3-202ENST00000393773 GABRG1Q8N1C3 465 aa13.7□□□□□ -0.22
CHMP3-202ENST00000393773 STEAP2Q8NFT2 490 aa13.7□□□□□ -0.22
CHMP3-202ENST00000393773 OR2V1Q8NHB1 315 aa13.7□□□□□ -0.22
CHMP3-202ENST00000393773 CDC26Q8NHZ8 85 aa13.7□□□□□ -0.22
CHMP3-202ENST00000393773 METTL6Q8TCB7 284 aa13.7□□□□□ -0.22
CHMP3-202ENST00000393773 RNF128Q8TEB7 428 aa13.7□□□□□ -0.22
CHMP3-202ENST00000393773 SLC9A6Q92581 669 aa13.7□□□□□ -0.22
CHMP3-202ENST00000393773 NEUROG1Q92886 237 aa13.7□□□□□ -0.22
CHMP3-202ENST00000393773 ELP4Q96EB1 424 aa13.7□□□□□ -0.22
CHMP3-202ENST00000393773 KCNA7Q96RP8 456 aa13.7□□□□□ -0.22
CHMP3-202ENST00000393773 KLHDC3Q9BQ90 382 aa13.7□□□□□ -0.22
CHMP3-202ENST00000393773 MYNNQ9NPC7 610 aa13.7□□□□□ -0.22
CHMP3-202ENST00000393773 TAS2R7Q9NYW3 318 aa13.7□□□□□ -0.22
CHMP3-202ENST00000393773 MRTO4Q9UKD2 239 aaKnown RBP13.7□□□□□ -0.22
CHMP3-202ENST00000393773 GRID1Q9ULK0 1009 aa13.7□□□□□ -0.22
CHMP3-202ENST00000393773 NFU1Q9UMS0 254 aa13.7□□□□□ -0.22
CHMP3-202ENST00000393773 A0A087WZY1 265 aa13.69□□□□□ -0.22
CHMP3-202ENST00000393773 A0A0J9YW62 118 aa13.69□□□□□ -0.22
CHMP3-202ENST00000393773 SERTM1A2A2V5 107 aa13.69□□□□□ -0.22
CHMP3-202ENST00000393773 ALG1L2C9J202 215 aa13.69□□□□□ -0.22
CHMP3-202ENST00000393773 CLOCKO15516 846 aa13.69□□□□□ -0.22
CHMP3-202ENST00000393773 DLX3O60479 287 aa13.69□□□□□ -0.22
CHMP3-202ENST00000393773 SYNGR4O95473 234 aa13.69□□□□□ -0.22
CHMP3-202ENST00000393773 OXSR1O95747 527 aaPredicted RBP13.69□□□□□ -0.22
CHMP3-202ENST00000393773 OPN1LWP04000 364 aa13.69□□□□□ -0.22
CHMP3-202ENST00000393773 TP53P04637 393 aaPredicted RBP13.69□□□□□ -0.22
CHMP3-202ENST00000393773 ENO1P06733 434 aaKnown RBP13.69□□□□□ -0.22
CHMP3-202ENST00000393773 NGFRP08138 427 aa13.69□□□□□ -0.22
CHMP3-202ENST00000393773 NTSP30990 170 aa13.69□□□□□ -0.22
CHMP3-202ENST00000393773 IDUAP35475 653 aa13.69□□□□□ -0.22
CHMP3-202ENST00000393773 MAP3K8P41279 467 aa13.69□□□□□ -0.22
CHMP3-202ENST00000393773 RAC1P63000 192 aa13.69□□□□□ -0.22
CHMP3-202ENST00000393773 SLC7A5Q01650 507 aa13.69□□□□□ -0.22
CHMP3-202ENST00000393773 ZNHIT3Q15649 155 aaPredicted RBP13.69□□□□□ -0.22
CHMP3-202ENST00000393773 TSC22D1Q15714 1073 aa13.69□□□□□ -0.22
CHMP3-202ENST00000393773 ZNF239Q16600 458 aaKnown RBP13.69□□□□□ -0.22
CHMP3-202ENST00000393773 PGGHGQ32M88 737 aa13.69□□□□□ -0.22
CHMP3-202ENST00000393773 PODNL1Q6PEZ8 512 aa13.69□□□□□ -0.22
CHMP3-202ENST00000393773 ESPNLQ6ZVH7 1005 aa13.69□□□□□ -0.22
CHMP3-202ENST00000393773 KBTBD8Q8NFY9 601 aa13.69□□□□□ -0.22
CHMP3-202ENST00000393773 POC1BQ8TC44 478 aa13.69□□□□□ -0.22
CHMP3-202ENST00000393773 PIK3R3Q92569 461 aa13.69□□□□□ -0.22
CHMP3-202ENST00000393773 ZBTB8AQ96BR9 441 aa13.69□□□□□ -0.22
CHMP3-202ENST00000393773 TRMT61AQ96FX7 289 aaKnown RBP13.69□□□□□ -0.22
CHMP3-202ENST00000393773 RNF145Q96MT1 663 aa13.69□□□□□ -0.22
CHMP3-202ENST00000393773 TACO1Q9BSH4 297 aaKnown RBP13.69□□□□□ -0.22
CHMP3-202ENST00000393773 TMEM185BQ9H7F4 350 aa13.69□□□□□ -0.22
CHMP3-202ENST00000393773 LRTM1Q9HBL6 345 aa13.69□□□□□ -0.22
CHMP3-202ENST00000393773 MIEF1Q9NQG6 463 aa13.69□□□□□ -0.22
CHMP3-202ENST00000393773 STOML1Q9UBI4 398 aa13.69□□□□□ -0.22
CHMP3-202ENST00000393773 ZNF180Q9UJW8 692 aa13.69□□□□□ -0.22
CHMP3-202ENST00000393773 TIMM22Q9Y584 194 aa13.69□□□□□ -0.22
CHMP3-202ENST00000393773 SVEP1Q4LDE5 3571 aa13.68□□□□□ -0.22
CHMP3-202ENST00000393773 A0A1W2PRB8 838 aa13.68□□□□□ -0.22
CHMP3-202ENST00000393773 KCNH1O95259 989 aa13.68□□□□□ -0.22
CHMP3-202ENST00000393773 SHC1P29353 583 aa13.68□□□□□ -0.22
CHMP3-202ENST00000393773 SLC18A2Q05940 514 aa13.68□□□□□ -0.22
CHMP3-202ENST00000393773 BTKQ06187 659 aa13.68□□□□□ -0.22
CHMP3-202ENST00000393773 C2orf80Q0P641 193 aa13.68□□□□□ -0.22
CHMP3-202ENST00000393773 LCP2Q13094 533 aa13.68□□□□□ -0.22
CHMP3-202ENST00000393773 TAB1Q15750 504 aa13.68□□□□□ -0.22
CHMP3-202ENST00000393773 ZNF672Q499Z4 452 aaPredicted RBP13.68□□□□□ -0.22
CHMP3-202ENST00000393773 HBMQ6B0K9 141 aa13.68□□□□□ -0.22
CHMP3-202ENST00000393773 FIGNL1Q6PIW4 674 aa13.68□□□□□ -0.22
CHMP3-202ENST00000393773 ABHD3Q8WU67 409 aa13.68□□□□□ -0.22
CHMP3-202ENST00000393773 SMAP2Q8WU79 429 aaPredicted RBP13.68□□□□□ -0.22
CHMP3-202ENST00000393773 EQTNQ9NQ60 294 aa13.68□□□□□ -0.22
CHMP3-202ENST00000393773 MED17Q9NVC6 651 aa13.68□□□□□ -0.22
CHMP3-202ENST00000393773 TMEM216Q9P0N5 145 aa13.68□□□□□ -0.22
CHMP3-202ENST00000393773 LIPT1Q9Y234 373 aa13.68□□□□□ -0.22
CHMP3-202ENST00000393773 STK38LQ9Y2H1 464 aa13.68□□□□□ -0.22
CHMP3-202ENST00000393773 A0A096LNT2 108 aa13.67□□□□□ -0.22
CHMP3-202ENST00000393773 TTC36A6NLP5 189 aa13.67□□□□□ -0.22
CHMP3-202ENST00000393773 ADAM11O75078 769 aa13.67□□□□□ -0.22
CHMP3-202ENST00000393773 NDUFS7O75251 213 aa13.67□□□□□ -0.22
CHMP3-202ENST00000393773 NKX2-2O95096 273 aa13.67□□□□□ -0.22
CHMP3-202ENST00000393773 IFNA2P01563 188 aa13.67□□□□□ -0.22
CHMP3-202ENST00000393773 CD3EP07766 207 aa13.67□□□□□ -0.22
CHMP3-202ENST00000393773 GABRA3P34903 492 aa13.67□□□□□ -0.22
CHMP3-202ENST00000393773 ZNF41P51814 821 aaPredicted RBP13.67□□□□□ -0.22
CHMP3-202ENST00000393773 FOXA1P55317 472 aa13.67□□□□□ -0.22
CHMP3-202ENST00000393773 PKNOX1P55347 436 aa13.67□□□□□ -0.22
CHMP3-202ENST00000393773 SLC29A2Q14542 456 aa13.67□□□□□ -0.22
CHMP3-202ENST00000393773 TEX35Q5T0J7 233 aa13.67□□□□□ -0.22
CHMP3-202ENST00000393773 ALKBH2Q6NS38 261 aa13.67□□□□□ -0.22
CHMP3-202ENST00000393773 C8orf74Q6P047 294 aa13.67□□□□□ -0.22
CHMP3-202ENST00000393773 DNAJC14Q6Y2X3 702 aaPredicted RBP13.67□□□□□ -0.22
CHMP3-202ENST00000393773 ZAR1Q86SH2 424 aa13.67□□□□□ -0.22
CHMP3-202ENST00000393773 ZNF619Q8N2I2 560 aa13.67□□□□□ -0.22
CHMP3-202ENST00000393773 GATSQ8NAP1 163 aa13.67□□□□□ -0.22
CHMP3-202ENST00000393773 OR4C3Q8NH37 302 aa13.67□□□□□ -0.22
CHMP3-202ENST00000393773 ACTRT2Q8TDY3 377 aa13.67□□□□□ -0.22
CHMP3-202ENST00000393773 GTPBP3Q969Y2 492 aaKnown RBP13.67□□□□□ -0.22
CHMP3-202ENST00000393773 L3HYPDHQ96EM0 354 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms