RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 WBP1Q96G27 269 aa12.52□□□□□ -0.4
PTN-202ENST00000393083 ART5Q96L15 291 aa12.52□□□□□ -0.4
PTN-202ENST00000393083 FER1L6-AS2Q96M78 137 aa12.52□□□□□ -0.4
PTN-202ENST00000393083 WDR77Q9BQA1 342 aaPredicted RBP12.52□□□□□ -0.4
PTN-202ENST00000393083 OSBPL11Q9BXB4 747 aa12.52□□□□□ -0.4
PTN-202ENST00000393083 OR8D2Q9GZM6 311 aa12.52□□□□□ -0.4
PTN-202ENST00000393083 SLC13A4Q9UKG4 626 aa12.52□□□□□ -0.4
PTN-202ENST00000393083 ZNF443Q9Y2A4 671 aaPredicted RBP12.52□□□□□ -0.4
PTN-202ENST00000393083 SLC9A8Q9Y2E8 581 aa12.52□□□□□ -0.4
PTN-202ENST00000393083 FAM32AQ9Y421 112 aaKnown RBP12.52□□□□□ -0.4
PTN-202ENST00000393083 EXPH5Q8NEV8 1989 aa12.52□□□□□ -0.41
PTN-202ENST00000393083 TTC36A6NLP5 189 aa12.52□□□□□ -0.41
PTN-202ENST00000393083 M0R3H8 397 aa12.52□□□□□ -0.41
PTN-202ENST00000393083 KIAA0513O60268 411 aa12.52□□□□□ -0.41
PTN-202ENST00000393083 DDAH2O95865 285 aa12.52□□□□□ -0.41
PTN-202ENST00000393083 HPP00738 406 aa12.52□□□□□ -0.41
PTN-202ENST00000393083 HPRP00739 348 aa12.52□□□□□ -0.41
PTN-202ENST00000393083 RPSAP08865 295 aaKnown RBP12.52□□□□□ -0.41
PTN-202ENST00000393083 TRHRP34981 398 aaPredicted RBP12.52□□□□□ -0.41
PTN-202ENST00000393083 RFX3P48380 749 aa12.52□□□□□ -0.41
PTN-202ENST00000393083 ARHGDIAP52565 204 aa12.52□□□□□ -0.41
PTN-202ENST00000393083 RRADP55042 308 aa12.52□□□□□ -0.41
PTN-202ENST00000393083 Q0VFX4 171 aa12.52□□□□□ -0.41
PTN-202ENST00000393083 NNATQ16517 81 aa12.52□□□□□ -0.41
PTN-202ENST00000393083 C6orf52Q5T4I8 152 aa12.52□□□□□ -0.41
PTN-202ENST00000393083 DHRS4L2Q6PKH6 230 aa12.52□□□□□ -0.41
PTN-202ENST00000393083 DEF8Q6ZN54 512 aa12.52□□□□□ -0.41
PTN-202ENST00000393083 CPEB2Q7Z5Q1 589 aaKnown RBP12.52□□□□□ -0.41
PTN-202ENST00000393083 AMER2Q8N7J2 671 aa12.52□□□□□ -0.41
PTN-202ENST00000393083 ZNF321PQ8N8H1 164 aa12.52□□□□□ -0.41
PTN-202ENST00000393083 EXD3Q8N9H8 876 aa12.52□□□□□ -0.41
PTN-202ENST00000393083 OR4D11Q8NGI4 311 aa12.52□□□□□ -0.41
PTN-202ENST00000393083 DAZLQ92904 295 aaKnown RBP12.52□□□□□ -0.41
PTN-202ENST00000393083 SENP5Q96HI0 755 aaPredicted RBP12.52□□□□□ -0.41
PTN-202ENST00000393083 IMMP1LQ96LU5 166 aa12.52□□□□□ -0.41
PTN-202ENST00000393083 UBL7Q96S82 380 aaPredicted RBP12.52□□□□□ -0.41
PTN-202ENST00000393083 EPYCQ99645 322 aa12.52□□□□□ -0.41
PTN-202ENST00000393083 PIP5K1AQ99755 562 aa12.52□□□□□ -0.41
PTN-202ENST00000393083 GABARAPL1Q9H0R8 117 aa12.52□□□□□ -0.41
PTN-202ENST00000393083 MTHFD2LQ9H903 347 aaPredicted RBP12.52□□□□□ -0.41
PTN-202ENST00000393083 Q9N2J8 555 aa12.52□□□□□ -0.41
PTN-202ENST00000393083 POLE3Q9NRF9 147 aa12.52□□□□□ -0.41
PTN-202ENST00000393083 FBXO34Q9NWN3 711 aa12.52□□□□□ -0.41
PTN-202ENST00000393083 SMPD3Q9NY59 655 aaPredicted RBP12.52□□□□□ -0.41
PTN-202ENST00000393083 MED13Q9UHV7 2174 aa12.51□□□□□ -0.41
PTN-202ENST00000393083 NPIPA5A0A0B4J1W7 369 aa12.51□□□□□ -0.41
PTN-202ENST00000393083 IGHV3-20A0A0C4DH32 117 aa12.51□□□□□ -0.41
PTN-202ENST00000393083 NPIPA7E9PJI5 369 aa12.51□□□□□ -0.41
PTN-202ENST00000393083 SYT5O00445 386 aa12.51□□□□□ -0.41
PTN-202ENST00000393083 CEACAM4O75871 244 aa12.51□□□□□ -0.41
PTN-202ENST00000393083 KCNK2O95069 426 aa12.51□□□□□ -0.41
PTN-202ENST00000393083 EPPINO95925 133 aa12.51□□□□□ -0.41
PTN-202ENST00000393083 LGI1O95970 557 aa12.51□□□□□ -0.41
PTN-202ENST00000393083 ALPLP05186 524 aa12.51□□□□□ -0.41
PTN-202ENST00000393083 FAM87AP0C7U9 286 aa12.51□□□□□ -0.41
PTN-202ENST00000393083 NPIPA8P0DM63 369 aa12.51□□□□□ -0.41
PTN-202ENST00000393083 RHCEP18577 417 aa12.51□□□□□ -0.41
PTN-202ENST00000393083 RPS4Y1P22090 263 aaKnown RBP12.51□□□□□ -0.41
PTN-202ENST00000393083 PRKAR1BP31321 381 aa12.51□□□□□ -0.41
PTN-202ENST00000393083 CDH12P55289 794 aa12.51□□□□□ -0.41
PTN-202ENST00000393083 SLC37A1P57057 533 aa12.51□□□□□ -0.41
PTN-202ENST00000393083 SOX8P57073 446 aa12.51□□□□□ -0.41
PTN-202ENST00000393083 GANABQ14697 944 aaKnown RBP12.51□□□□□ -0.41
PTN-202ENST00000393083 LAPTM4AQ15012 233 aa12.51□□□□□ -0.41
PTN-202ENST00000393083 ZNF836Q6ZNA1 936 aa12.51□□□□□ -0.41
PTN-202ENST00000393083 ZNF605Q86T29 641 aa12.51□□□□□ -0.41
PTN-202ENST00000393083 CYP4Z1Q86W10 505 aa12.51□□□□□ -0.41
PTN-202ENST00000393083 LACC1Q8IV20 430 aa12.51□□□□□ -0.41
PTN-202ENST00000393083 ZNF721Q8TF20 911 aa12.51□□□□□ -0.41
PTN-202ENST00000393083 ZG16BQ96DA0 208 aa12.51□□□□□ -0.41
PTN-202ENST00000393083 BARD1Q99728 777 aaKnown RBP12.51□□□□□ -0.41
PTN-202ENST00000393083 RBM4BQ9BQ04 359 aaKnown RBP12.51□□□□□ -0.41
PTN-202ENST00000393083 RBM4Q9BWF3 364 aaKnown RBP12.51□□□□□ -0.41
PTN-202ENST00000393083 OSBPL10Q9BXB5 764 aa12.51□□□□□ -0.41
PTN-202ENST00000393083 SAP130Q9H0E3 1048 aa12.51□□□□□ -0.41
PTN-202ENST00000393083 SMURF2Q9HAU4 748 aa12.51□□□□□ -0.41
PTN-202ENST00000393083 ZNF160Q9HCG1 818 aa12.51□□□□□ -0.41
PTN-202ENST00000393083 ATP13A2Q9NQ11 1180 aa12.51□□□□□ -0.41
PTN-202ENST00000393083 USE1Q9NZ43 259 aa12.51□□□□□ -0.41
PTN-202ENST00000393083 C19orf25Q9UFG5 118 aaPredicted RBP12.51□□□□□ -0.41
PTN-202ENST00000393083 CFL2Q9Y281 166 aa12.51□□□□□ -0.41
PTN-202ENST00000393083 IFT52Q9Y366 437 aa12.51□□□□□ -0.41
PTN-202ENST00000393083 LYVE1Q9Y5Y7 322 aa12.51□□□□□ -0.41
PTN-202ENST00000393083 ZFYVE26Q68DK2 2539 aa12.5□□□□□ -0.41
PTN-202ENST00000393083 NSG1A0A0A6YYJ2 146 aa12.5□□□□□ -0.41
PTN-202ENST00000393083 CENPVL1A0A0U1RR11 272 aa12.5□□□□□ -0.41
PTN-202ENST00000393083 TNFRSF11BO00300 401 aa12.5□□□□□ -0.41
PTN-202ENST00000393083 DLGAP1O14490 977 aa12.5□□□□□ -0.41
PTN-202ENST00000393083 ATXN7O15265 892 aaPredicted RBP12.5□□□□□ -0.41
PTN-202ENST00000393083 HS6ST1O60243 411 aa12.5□□□□□ -0.41
PTN-202ENST00000393083 IGKV3-11P04433 115 aa12.5□□□□□ -0.41
PTN-202ENST00000393083 DBIP07108 87 aaKnown RBP12.5□□□□□ -0.41
PTN-202ENST00000393083 THBS1P07996 1170 aa12.5□□□□□ -0.41
PTN-202ENST00000393083 CT45A8P0DMV1 189 aa12.5□□□□□ -0.41
PTN-202ENST00000393083 CT45A9P0DMV2 189 aa12.5□□□□□ -0.41
PTN-202ENST00000393083 THRBP10828 461 aa12.5□□□□□ -0.41
PTN-202ENST00000393083 CCL11P51671 97 aa12.5□□□□□ -0.41
PTN-202ENST00000393083 PPP2R2BQ00005 443 aa12.5□□□□□ -0.41
PTN-202ENST00000393083 AIMP2Q13155 320 aaKnown RBP12.5□□□□□ -0.41
PTN-202ENST00000393083 MED21Q13503 144 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms