RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 PITX2Q99697 317 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 DOHHQ9BU89 302 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 HMX1Q9NP08 348 aaPredicted RBP7.19□□□□□ -1.26
VTI1A-201ENST00000393077 SMIM35A0A1B0GVV1 85 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 ZNF593O00488 134 aaPredicted RBP7.19□□□□□ -1.26
VTI1A-201ENST00000393077 TMEM127O75204 238 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 UBXN7O94888 489 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 AGR2O95994 175 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 USP17L7P0C7H9 530 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 GNSP15586 552 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 MGMTP16455 207 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 TOMM34Q15785 309 aaPredicted RBP7.19□□□□□ -1.26
VTI1A-201ENST00000393077 APOOLQ6UXV4 268 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 HIST2H3AQ71DI3 136 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 ELF4Q99607 663 aaPredicted RBP7.19□□□□□ -1.26
VTI1A-201ENST00000393077 HEXA-AS1Q9H8Q6 139 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 METTL1Q9UBP6 276 aaKnown RBP7.19□□□□□ -1.26
VTI1A-201ENST00000393077 FLVCR2Q9UPI3 526 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 ECM29Q5VYK3 1845 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 SUSD5O60279 629 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 FKTNO75072 461 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 F12P00748 615 aaPredicted RBP7.19□□□□□ -1.26
VTI1A-201ENST00000393077 IGHV2-70P01814 119 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 UCHL1P09936 223 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 PRPS2P11908 318 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 IFNGR1P15260 489 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 SDHBP21912 280 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 EDNRBP24530 442 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 LHX1P48742 406 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 MRPL19P49406 292 aaKnown RBP7.19□□□□□ -1.26
VTI1A-201ENST00000393077 WNT7BP56706 349 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 TARBP2Q15633 366 aaKnown RBP7.19□□□□□ -1.26
VTI1A-201ENST00000393077 NDUFA9Q16795 377 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 RNASE10Q5GAN6 216 aaKnown RBP7.19□□□□□ -1.26
VTI1A-201ENST00000393077 CRB2Q5IJ48 1285 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 DLEU7Q6UYE1 221 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 GAREM2Q75VX8 874 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 OR4E2Q8NGC2 313 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 OR5M3Q8NGP4 307 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 PXYLP1Q8TE99 480 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 NDRG1Q92597 394 aaKnown RBP7.19□□□□□ -1.26
VTI1A-201ENST00000393077 SLC22A18Q96BI1 424 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 DPH2Q9BQC3 489 aaPredicted RBP7.19□□□□□ -1.26
VTI1A-201ENST00000393077 ATG101Q9BSB4 218 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 C20orf24Q9BUV8 137 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 FNDC11Q9BVV2 318 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 ULBP1Q9BZM6 244 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 GABARAPL1Q9H0R8 117 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 RNF208Q9H0X6 261 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 WNT5BQ9H1J7 359 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 RNF39Q9H2S5 420 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 MRPS23Q9Y3D9 190 aaKnown RBP7.19□□□□□ -1.26
VTI1A-201ENST00000393077 RAI2Q9Y5P3 530 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 ZNF705FA8MVS1 300 aaPredicted RBP7.18□□□□□ -1.26
VTI1A-201ENST00000393077 ICOSLGO75144 302 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 SH3BGRLO75368 114 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 ZNF705DP0CH99 300 aaPredicted RBP7.18□□□□□ -1.26
VTI1A-201ENST00000393077 ZNF705BP0CI00 300 aaPredicted RBP7.18□□□□□ -1.26
VTI1A-201ENST00000393077 COX5BP10606 129 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 GDNFP39905 211 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 AGTR2P50052 363 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 E2F1Q01094 437 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 GSG1Q2KHT4 349 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 CTXN3Q4LDR2 81 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 C10orf120Q5SQS8 335 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 KIAA1211LQ6NV74 962 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 PAQR3Q6TCH7 311 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 LRRTM1Q86UE6 522 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 TMEM130Q8N3G9 435 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 JAGN1Q8N5M9 183 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 OR1S2Q8NGQ3 325 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 AUTS2Q8WXX7 1259 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 SLC41A3Q96GZ6 507 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 MS4A4EQ96PG1 132 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 TBX5Q99593 518 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 PRR14Q9BWN1 585 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 KCNJ16Q9NPI9 418 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 B3GAT2Q9NPZ5 323 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 KLHL9Q9P2J3 617 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 DHCR7Q9UBM7 475 aaKnown RBP7.18□□□□□ -1.26
VTI1A-201ENST00000393077 SCML2Q9UQR0 700 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 DYRK1BQ9Y463 629 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 SNX11Q9Y5W9 270 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 STYXL1Q9Y6J8 313 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 KIAA0100Q14667 2235 aaKnown RBP7.18□□□□□ -1.26
VTI1A-201ENST00000393077 TP53BP1Q12888 1972 aaPredicted RBP7.18□□□□□ -1.26
VTI1A-201ENST00000393077 TRBV23OR9-2A0A075B6M9 112 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 TMEM88BA6NKF7 163 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 CACNB4O00305 520 aaPredicted RBP7.18□□□□□ -1.26
VTI1A-201ENST00000393077 MAGEB4O15481 346 aaPredicted RBP7.18□□□□□ -1.26
VTI1A-201ENST00000393077 TCF21O43680 179 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 CILPO75339 1184 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 ENDOD1O94919 500 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 AHSA1O95433 338 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 HIST1H2ABP04908 130 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 NFYBP25208 207 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 GABRA5P31644 462 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 PPM1AP35813 382 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 MAP3K8P41279 467 aa7.18□□□□□ -1.26
VTI1A-201ENST00000393077 CHRNA4P43681 627 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms