RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 FZR1Q9UM11 496 aa0.75□□□□□ -2.29
SNORD28B-201ENST00000390993 SAMD4AQ9UPU9 718 aaKnown RBP0.75□□□□□ -2.29
SNORD28B-201ENST00000390993 PLLPQ9Y342 182 aa0.75□□□□□ -2.29
SNORD28B-201ENST00000390993 L3MBTL1Q9Y468 752 aa0.75□□□□□ -2.29
SNORD28B-201ENST00000390993 ZNFX1Q9P2E3 1918 aaKnown RBP0.75□□□□□ -2.29
SNORD28B-201ENST00000390993 SLIT3O75094 1523 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 KAT6BQ8WYB5 2073 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 ARHGAP21Q5T5U3 1957 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 DHX57Q6P158 1386 aaKnown RBP0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 IGLV2-18A0A075B6J9 118 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 PPIAL4EA0A075B759 164 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 PPIAL4CA0A0B4J2A2 164 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 A0A0U1RQS6 177 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 TTC26A0AVF1 554 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 PPIAL4DF5H284 164 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 PES1O00541 588 aaKnown RBP0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 RIPK2O43353 540 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 PPIHO43447 177 aaKnown RBP0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 RBBP9O75884 186 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 AKR7A3O95154 331 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 TIMP1P01033 207 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 CHRNA1P02708 482 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 PCCAP05165 728 aaPredicted RBP0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 PCCBP05166 539 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 IGKV4-1P06312 121 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 PPIAL4FP0DN26 164 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 UROSP10746 265 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 BCKDHAP12694 445 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 AREGP15514 252 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 IGLL1P15814 213 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 MAT2AP31153 395 aaKnown RBP0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 EPHX2P34913 555 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 RFC2P35250 354 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 TCF7P36402 384 aaPredicted RBP0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 KIR2DS2P43631 304 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 RPS9P46781 194 aaKnown RBP0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 APOC4P55056 127 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 CASP9P55211 416 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 ACTA2P62736 377 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 ACTC1P68032 377 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 KRT83P78385 493 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 VLDLRP98155 873 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 GALK2Q01415 458 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 BDH1Q02338 343 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 EGFEM1PQ0D2K5 195 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 RCN2Q14257 317 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 UBE2V2Q15819 145 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 CMPK2Q5EBM0 449 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 PAGE3Q5JUK9 113 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 PRAMEF8Q5VWM4 474 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 ZNF57Q68EA5 555 aaPredicted RBP0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 OR52W1Q6IF63 320 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 SLC25A34Q6PIV7 304 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 OLFM4Q6UX06 510 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 CXCL17Q6UXB2 119 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 IL34Q6ZMJ4 242 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 FAM47EQ6ZV65 393 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 GALNTL5Q7Z4T8 443 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 VRK2Q86Y07 508 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 UNC45BQ8IWX7 931 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 SKA3Q8IX90 412 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 MTURNQ8N3F0 131 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 BPIFB2Q8N4F0 458 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 ZSCAN4Q8NAM6 433 aaPredicted RBP0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 DUSP18Q8NEJ0 188 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 AENQ8WTP8 325 aaKnown RBP0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 FAM151AQ8WW52 585 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 ARNTL2Q8WYA1 636 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 OR1E3Q8WZA6 343 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 BCL2L2Q92843 193 aaPredicted RBP0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 ART4Q93070 314 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 TMEM45BQ96B21 275 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 EXOSC8Q96B26 276 aaKnown RBP0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 SDSLQ96GA7 329 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 ZNF578Q96N58 590 aaPredicted RBP0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 TSNARE1Q96NA8 513 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 DEFB118Q96PH6 123 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 ARHGDIGQ99819 225 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 SPIN2AQ99865 258 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 SPIN2BQ9BPZ2 258 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 NDUFAF3Q9BU61 184 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 FUT8Q9BYC5 575 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 GRPEL1Q9HAV7 217 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 NTN4Q9HB63 628 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 IL1RAPL2Q9NP60 686 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 STOX2Q9P2F5 926 aaPredicted RBP0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 SPRR3Q9UBC9 169 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 MIOXQ9UGB7 285 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 CRLS1Q9UJA2 301 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 ZNF490Q9ULM2 529 aaPredicted RBP0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 LIPT1Q9Y234 373 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 EXOSC1Q9Y3B2 195 aaKnown RBP0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 GMPPBQ9Y5P6 360 aa0.74□□□□□ -2.29
SNORD28B-201ENST00000390993 PTCH1Q13635 1447 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 COL1A2P08123 1366 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 TTC21BQ7Z4L5 1316 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 IGHV1OR15-1A0A075B7D0 117 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 SAGE2PA6NJ88 616 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 CASKO14936 926 aa0.73□□□□□ -2.29
SNORD28B-201ENST00000390993 B4GALT5O43286 388 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms