RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 ACTR10Q9NZ32 417 aa13.41□□□□□ -0.26
RTF1-201ENST00000389629 KCNK6Q9Y257 313 aa13.41□□□□□ -0.26
RTF1-201ENST00000389629 XIRP1Q702N8 1843 aaKnown RBP13.41□□□□□ -0.26
RTF1-201ENST00000389629 PEX14O75381 377 aa13.41□□□□□ -0.26
RTF1-201ENST00000389629 AK4P27144 223 aaPredicted RBP13.41□□□□□ -0.26
RTF1-201ENST00000389629 C3orf38Q5JPI3 329 aa13.41□□□□□ -0.26
RTF1-201ENST00000389629 WDR53Q7Z5U6 358 aaPredicted RBP13.41□□□□□ -0.26
RTF1-201ENST00000389629 ZMYND19Q96E35 227 aaPredicted RBP13.41□□□□□ -0.26
RTF1-201ENST00000389629 EMC7Q9NPA0 242 aa13.41□□□□□ -0.26
RTF1-201ENST00000389629 WASH6PQ9NQA3 447 aa13.41□□□□□ -0.26
RTF1-201ENST00000389629 C1SP09871 688 aa13.41□□□□□ -0.26
RTF1-201ENST00000389629 NFYAP23511 347 aaPredicted RBP13.41□□□□□ -0.26
RTF1-201ENST00000389629 ELAVL4P26378 380 aaKnown RBP13.41□□□□□ -0.26
RTF1-201ENST00000389629 IMPA1P29218 277 aa13.41□□□□□ -0.26
RTF1-201ENST00000389629 MLIPQ5VWP3 458 aa13.41□□□□□ -0.26
RTF1-201ENST00000389629 SSX6Q7RTT6 188 aa13.41□□□□□ -0.26
RTF1-201ENST00000389629 C4orf36Q96KX1 117 aa13.41□□□□□ -0.26
RTF1-201ENST00000389629 SLC22A12Q96S37 553 aa13.41□□□□□ -0.26
RTF1-201ENST00000389629 TREX2Q9BQ50 279 aaPredicted RBP13.41□□□□□ -0.26
RTF1-201ENST00000389629 TMEM43Q9BTV4 400 aa13.41□□□□□ -0.26
RTF1-201ENST00000389629 TRIM2Q9C040 744 aa13.41□□□□□ -0.26
RTF1-201ENST00000389629 METTL21EPA6NDL7 271 aa13.4□□□□□ -0.26
RTF1-201ENST00000389629 GMDSO60547 372 aa13.4□□□□□ -0.26
RTF1-201ENST00000389629 FBXO45P0C2W1 286 aa13.4□□□□□ -0.26
RTF1-201ENST00000389629 SLC6A6P31641 620 aa13.4□□□□□ -0.26
RTF1-201ENST00000389629 DSC1Q08554 894 aa13.4□□□□□ -0.26
RTF1-201ENST00000389629 ZBTB37Q5TC79 503 aa13.4□□□□□ -0.26
RTF1-201ENST00000389629 ADGRF3Q8IZF5 1079 aa13.4□□□□□ -0.26
RTF1-201ENST00000389629 C10orf111Q8N326 155 aa13.4□□□□□ -0.26
RTF1-201ENST00000389629 DNAJA3Q96EY1 480 aa13.4□□□□□ -0.26
RTF1-201ENST00000389629 C1QTNF7Q9BXJ2 289 aa13.4□□□□□ -0.26
RTF1-201ENST00000389629 FBXL2Q9UKC9 423 aa13.4□□□□□ -0.26
RTF1-201ENST00000389629 SLC9B1P1A6NJY1 282 aa13.4□□□□□ -0.26
RTF1-201ENST00000389629 FURINP09958 794 aa13.4□□□□□ -0.26
RTF1-201ENST00000389629 M6PRP20645 277 aa13.4□□□□□ -0.26
RTF1-201ENST00000389629 ART1P52961 327 aa13.4□□□□□ -0.26
RTF1-201ENST00000389629 QSOX2Q6ZRP7 698 aa13.4□□□□□ -0.26
RTF1-201ENST00000389629 PRSS45Q7RTY3 260 aa13.4□□□□□ -0.26
RTF1-201ENST00000389629 OR52E2Q8NGJ4 325 aa13.4□□□□□ -0.26
RTF1-201ENST00000389629 CXorf36Q9H7Y0 433 aa13.4□□□□□ -0.26
RTF1-201ENST00000389629 NDUFB11Q9NX14 153 aa13.4□□□□□ -0.26
RTF1-201ENST00000389629 PTTG3PQ9NZH4 202 aa13.4□□□□□ -0.26
RTF1-201ENST00000389629 hCG_1807616A0A1W2PRN6 198 aa13.4□□□□□ -0.26
RTF1-201ENST00000389629 SYPP08247 313 aa13.4□□□□□ -0.26
RTF1-201ENST00000389629 ZNF8P17098 575 aaPredicted RBP13.4□□□□□ -0.26
RTF1-201ENST00000389629 MAT2AP31153 395 aaKnown RBP13.4□□□□□ -0.26
RTF1-201ENST00000389629 PSMB10P40306 273 aa13.4□□□□□ -0.26
RTF1-201ENST00000389629 ETV6P41212 452 aa13.4□□□□□ -0.26
RTF1-201ENST00000389629 CLDN12P56749 244 aa13.4□□□□□ -0.26
RTF1-201ENST00000389629 CLVS2Q5SYC1 327 aa13.4□□□□□ -0.26
RTF1-201ENST00000389629 PSRC1Q6PGN9 363 aaPredicted RBP13.4□□□□□ -0.26
RTF1-201ENST00000389629 TCTE3Q8IZS6 198 aa13.4□□□□□ -0.26
RTF1-201ENST00000389629 OR5AR1Q8NGP9 310 aa13.4□□□□□ -0.26
RTF1-201ENST00000389629 IRF7Q92985 503 aa13.4□□□□□ -0.26
RTF1-201ENST00000389629 S100PBPQ96BU1 408 aa13.4□□□□□ -0.26
RTF1-201ENST00000389629 SEC22CQ9BRL7 303 aa13.4□□□□□ -0.26
RTF1-201ENST00000389629 DPH7Q9BTV6 452 aa13.4□□□□□ -0.26
RTF1-201ENST00000389629 ATG5Q9H1Y0 275 aa13.4□□□□□ -0.26
RTF1-201ENST00000389629 TDP1Q9NUW8 608 aa13.4□□□□□ -0.26
RTF1-201ENST00000389629 LGALS8O00214 317 aa13.4□□□□□ -0.26
RTF1-201ENST00000389629 LATS1O95835 1130 aa13.4□□□□□ -0.26
RTF1-201ENST00000389629 UCHL1P09936 223 aa13.4□□□□□ -0.26
RTF1-201ENST00000389629 GDNFP39905 211 aa13.4□□□□□ -0.26
RTF1-201ENST00000389629 XCR1P46094 333 aa13.4□□□□□ -0.26
RTF1-201ENST00000389629 MINDY4Q4G0A6 757 aa13.4□□□□□ -0.26
RTF1-201ENST00000389629 BAIAP2L2Q6UXY1 529 aa13.4□□□□□ -0.26
RTF1-201ENST00000389629 TMC8Q8IU68 726 aa13.4□□□□□ -0.26
RTF1-201ENST00000389629 GTPBP8Q8N3Z3 284 aaPredicted RBP13.4□□□□□ -0.26
RTF1-201ENST00000389629 NSMAFQ92636 917 aa13.4□□□□□ -0.26
RTF1-201ENST00000389629 CST11Q9H112 138 aa13.4□□□□□ -0.26
RTF1-201ENST00000389629 NEU3Q9UQ49 428 aa13.4□□□□□ -0.26
RTF1-201ENST00000389629 FAM171A2A8MVW0 826 aa13.39□□□□□ -0.27
RTF1-201ENST00000389629 SGCEO43556 437 aa13.39□□□□□ -0.27
RTF1-201ENST00000389629 PRAF2O60831 178 aa13.39□□□□□ -0.27
RTF1-201ENST00000389629 UBXN7O94888 489 aa13.39□□□□□ -0.27
RTF1-201ENST00000389629 LIPCP11150 499 aa13.39□□□□□ -0.27
RTF1-201ENST00000389629 PRKXP51817 358 aa13.39□□□□□ -0.27
RTF1-201ENST00000389629 TAS2R38P59533 333 aa13.39□□□□□ -0.27
RTF1-201ENST00000389629 HTR4Q13639 388 aa13.39□□□□□ -0.27
RTF1-201ENST00000389629 SYT14P1Q58G82 188 aa13.39□□□□□ -0.27
RTF1-201ENST00000389629 TIGD3Q6B0B8 471 aa13.39□□□□□ -0.27
RTF1-201ENST00000389629 FAM124AQ86V42 546 aa13.39□□□□□ -0.27
RTF1-201ENST00000389629 SETD7Q8WTS6 366 aaKnown RBP13.39□□□□□ -0.27
RTF1-201ENST00000389629 SLC41A3Q96GZ6 507 aa13.39□□□□□ -0.27
RTF1-201ENST00000389629 POLDIP3Q9BY77 421 aaKnown RBP13.39□□□□□ -0.27
RTF1-201ENST00000389629 BCL2L14Q9BZR8 327 aa13.39□□□□□ -0.27
RTF1-201ENST00000389629 ACOXLQ9NUZ1 547 aa13.39□□□□□ -0.27
RTF1-201ENST00000389629 SSC5DA1L4H1 1573 aa13.39□□□□□ -0.27
RTF1-201ENST00000389629 TBC1D3DA0A087WVF3 549 aa13.39□□□□□ -0.27
RTF1-201ENST00000389629 TBC1D3IA0A087WXS9 549 aa13.39□□□□□ -0.27
RTF1-201ENST00000389629 TBC1D3EA0A087X179 549 aa13.39□□□□□ -0.27
RTF1-201ENST00000389629 TBC1D3KA0A087X1G2 549 aa13.39□□□□□ -0.27
RTF1-201ENST00000389629 TBC1D3FA6NER0 549 aaPredicted RBP13.39□□□□□ -0.27
RTF1-201ENST00000389629 TBC1D3LB9A6J9 549 aa13.39□□□□□ -0.27
RTF1-201ENST00000389629 TBC1D3HP0C7X1 549 aa13.39□□□□□ -0.27
RTF1-201ENST00000389629 RBMS1P29558 406 aaKnown RBP13.39□□□□□ -0.27
RTF1-201ENST00000389629 AQP2P41181 271 aa13.39□□□□□ -0.27
RTF1-201ENST00000389629 GAS6Q14393 721 aa13.39□□□□□ -0.27
RTF1-201ENST00000389629 HBMQ6B0K9 141 aa13.39□□□□□ -0.27
RTF1-201ENST00000389629 TBC1D3GQ6DHY5 549 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms