RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 AGRPO00253 132 aa18.37■□□□□ 0.53
PDLIM5-205ENST00000380180 DRD5P21918 477 aa18.37■□□□□ 0.53
PDLIM5-205ENST00000380180 OMPP47874 163 aa18.37■□□□□ 0.53
PDLIM5-205ENST00000380180 MASP1P48740 699 aa18.37■□□□□ 0.53
PDLIM5-205ENST00000380180 LSAMPQ13449 338 aa18.37■□□□□ 0.53
PDLIM5-205ENST00000380180 YOD1Q5VVQ6 348 aaPredicted RBP18.37■□□□□ 0.53
PDLIM5-205ENST00000380180 C12orf73Q69YU5 71 aa18.37■□□□□ 0.53
PDLIM5-205ENST00000380180 QSOX2Q6ZRP7 698 aa18.37■□□□□ 0.53
PDLIM5-205ENST00000380180 ARHGAP22Q7Z5H3 698 aa18.37■□□□□ 0.53
PDLIM5-205ENST00000380180 ZNF614Q8N883 585 aa18.37■□□□□ 0.53
PDLIM5-205ENST00000380180 TMEM105Q8N8V8 129 aa18.37■□□□□ 0.53
PDLIM5-205ENST00000380180 TMEM255BQ8WV15 326 aa18.37■□□□□ 0.53
PDLIM5-205ENST00000380180 CLIP3Q96DZ5 547 aa18.37■□□□□ 0.53
PDLIM5-205ENST00000380180 RNF31Q96EP0 1072 aa18.37■□□□□ 0.53
PDLIM5-205ENST00000380180 FAM46AQ96IP4 442 aaKnown RBP18.37■□□□□ 0.53
PDLIM5-205ENST00000380180 ITPAQ9BY32 194 aa18.37■□□□□ 0.53
PDLIM5-205ENST00000380180 YKT6O15498 198 aa18.37■□□□□ 0.53
PDLIM5-205ENST00000380180 TRMUO75648 421 aaKnown RBP18.37■□□□□ 0.53
PDLIM5-205ENST00000380180 EFNA3P52797 238 aa18.37■□□□□ 0.53
PDLIM5-205ENST00000380180 GP2P55259 537 aaKnown RBP18.37■□□□□ 0.53
PDLIM5-205ENST00000380180 OR1Q1Q15612 314 aa18.37■□□□□ 0.53
PDLIM5-205ENST00000380180 CCDC81Q6ZN84 652 aa18.37■□□□□ 0.53
PDLIM5-205ENST00000380180 KIF18BQ86Y91 864 aa18.37■□□□□ 0.53
PDLIM5-205ENST00000380180 TMEM151BQ8IW70 566 aa18.37■□□□□ 0.53
PDLIM5-205ENST00000380180 GALNT15Q8N3T1 639 aa18.37■□□□□ 0.53
PDLIM5-205ENST00000380180 PIGXQ8TBF5 258 aa18.37■□□□□ 0.53
PDLIM5-205ENST00000380180 IL4I1Q96RQ9 567 aa18.37■□□□□ 0.53
PDLIM5-205ENST00000380180 DOK1Q99704 481 aa18.37■□□□□ 0.53
PDLIM5-205ENST00000380180 FKBP14Q9NWM8 211 aa18.37■□□□□ 0.53
PDLIM5-205ENST00000380180 CNIH4Q9P003 139 aa18.37■□□□□ 0.53
PDLIM5-205ENST00000380180 CBLCQ9ULV8 474 aa18.37■□□□□ 0.53
PDLIM5-205ENST00000380180 COL5A1P20908 1838 aaPredicted RBP18.36■□□□□ 0.53
PDLIM5-205ENST00000380180 AHCYL1O43865 530 aa18.36■□□□□ 0.53
PDLIM5-205ENST00000380180 MAN1A2O60476 641 aa18.36■□□□□ 0.53
PDLIM5-205ENST00000380180 FADS2O95864 444 aaKnown RBP18.36■□□□□ 0.53
PDLIM5-205ENST00000380180 GIPRP48546 466 aa18.36■□□□□ 0.53
PDLIM5-205ENST00000380180 TSPAN31Q12999 210 aa18.36■□□□□ 0.53
PDLIM5-205ENST00000380180 ARHGAP40Q5TG30 622 aa18.36■□□□□ 0.53
PDLIM5-205ENST00000380180 CASP12Q6UXS9 341 aa18.36■□□□□ 0.53
PDLIM5-205ENST00000380180 IQCF1Q8N6M8 205 aa18.36■□□□□ 0.53
PDLIM5-205ENST00000380180 ZNF321PQ8N8H1 164 aa18.36■□□□□ 0.53
PDLIM5-205ENST00000380180 TOR1AIP2Q8NFQ8 470 aa18.36■□□□□ 0.53
PDLIM5-205ENST00000380180 OR7G1Q8NGA0 311 aa18.36■□□□□ 0.53
PDLIM5-205ENST00000380180 CNOT9Q92600 299 aaKnown RBP18.36■□□□□ 0.53
PDLIM5-205ENST00000380180 RORBQ92753 470 aa18.36■□□□□ 0.53
PDLIM5-205ENST00000380180 LRRN3Q9H3W5 708 aa18.36■□□□□ 0.53
PDLIM5-205ENST00000380180 CLN6Q9NWW5 311 aa18.36■□□□□ 0.53
PDLIM5-205ENST00000380180 GPR83Q9NYM4 423 aa18.36■□□□□ 0.53
PDLIM5-205ENST00000380180 PRODH2Q9UF12 536 aa18.36■□□□□ 0.53
PDLIM5-205ENST00000380180 OR10H1Q9Y4A9 318 aa18.36■□□□□ 0.53
PDLIM5-205ENST00000380180 TRAPPC13A5PLN9 417 aa18.35■□□□□ 0.53
PDLIM5-205ENST00000380180 H3BMQ9 156 aa18.35■□□□□ 0.53
PDLIM5-205ENST00000380180 C21orf33P30042 268 aaPredicted RBP18.35■□□□□ 0.53
PDLIM5-205ENST00000380180 RHAGQ02094 409 aa18.35■□□□□ 0.53
PDLIM5-205ENST00000380180 MVKQ03426 396 aa18.35■□□□□ 0.53
PDLIM5-205ENST00000380180 GINS1Q14691 196 aa18.35■□□□□ 0.53
PDLIM5-205ENST00000380180 MBOAT2Q6ZWT7 520 aa18.35■□□□□ 0.53
PDLIM5-205ENST00000380180 ERI1Q8IV48 349 aaKnown RBP18.35■□□□□ 0.53
PDLIM5-205ENST00000380180 NRMQ8IXM6 262 aa18.35■□□□□ 0.53
PDLIM5-205ENST00000380180 SVOPQ8N4V2 548 aa18.35■□□□□ 0.53
PDLIM5-205ENST00000380180 BCORP1Q8N888 145 aa18.35■□□□□ 0.53
PDLIM5-205ENST00000380180 OR4D9Q8NGE8 314 aa18.35■□□□□ 0.53
PDLIM5-205ENST00000380180 MYDGFQ969H8 173 aa18.35■□□□□ 0.53
PDLIM5-205ENST00000380180 ARSGQ96EG1 525 aa18.35■□□□□ 0.53
PDLIM5-205ENST00000380180 COG8Q96MW5 612 aa18.35■□□□□ 0.53
PDLIM5-205ENST00000380180 PRSS27Q9BQR3 290 aa18.35■□□□□ 0.53
PDLIM5-205ENST00000380180 G6PC3Q9BUM1 346 aa18.35■□□□□ 0.53
PDLIM5-205ENST00000380180 POLR2J2Q9GZM3 115 aaKnown RBP18.35■□□□□ 0.53
PDLIM5-205ENST00000380180 EGLN3Q9H6Z9 239 aa18.35■□□□□ 0.53
PDLIM5-205ENST00000380180 ACOT13Q9NPJ3 140 aa18.35■□□□□ 0.53
PDLIM5-205ENST00000380180 WARS2Q9UGM6 360 aaKnown RBP18.35■□□□□ 0.53
PDLIM5-205ENST00000380180 IGHV5-10-1A0A0J9YXX1 117 aa18.35■□□□□ 0.53
PDLIM5-205ENST00000380180 SH3D21A4FU49 640 aa18.35■□□□□ 0.53
PDLIM5-205ENST00000380180 PRKNO60260 465 aaPredicted RBP18.35■□□□□ 0.53
PDLIM5-205ENST00000380180 ANKRD34CP0C6C1 535 aa18.35■□□□□ 0.53
PDLIM5-205ENST00000380180 SLC37A1P57057 533 aa18.35■□□□□ 0.53
PDLIM5-205ENST00000380180 SNRPGP62308 76 aaKnown RBP18.35■□□□□ 0.53
PDLIM5-205ENST00000380180 LAPTM4BQ86VI4 370 aa18.35■□□□□ 0.53
PDLIM5-205ENST00000380180 LSRQ86X29 649 aaPredicted RBP18.35■□□□□ 0.53
PDLIM5-205ENST00000380180 PRSS58Q8IYP2 241 aa18.35■□□□□ 0.53
PDLIM5-205ENST00000380180 ZSCAN1Q8NBB4 408 aa18.35■□□□□ 0.53
PDLIM5-205ENST00000380180 TRUB1Q8WWH5 349 aaKnown RBP18.35■□□□□ 0.53
PDLIM5-205ENST00000380180 PLA2G12AQ9BZM1 189 aa18.35■□□□□ 0.53
PDLIM5-205ENST00000380180 DSN1Q9H410 356 aa18.35■□□□□ 0.53
PDLIM5-205ENST00000380180 SYNDIG1Q9H7V2 258 aa18.35■□□□□ 0.53
PDLIM5-205ENST00000380180 SELENONQ9NZV5 590 aa18.35■□□□□ 0.53
PDLIM5-205ENST00000380180 CLCA3PQ9Y6N3 262 aa18.35■□□□□ 0.53
PDLIM5-205ENST00000380180 WDR87Q6ZQQ6 2873 aa18.34■□□□□ 0.53
PDLIM5-205ENST00000380180 TTC36A6NLP5 189 aa18.34■□□□□ 0.53
PDLIM5-205ENST00000380180 PIP5K1CO60331 668 aa18.34■□□□□ 0.53
PDLIM5-205ENST00000380180 FMO6PO60774 539 aa18.34■□□□□ 0.53
PDLIM5-205ENST00000380180 ATE1O95260 518 aa18.34■□□□□ 0.53
PDLIM5-205ENST00000380180 CDK1P06493 297 aa18.34■□□□□ 0.53
PDLIM5-205ENST00000380180 TMBIM6P55061 237 aa18.34■□□□□ 0.53
PDLIM5-205ENST00000380180 CDK5Q00535 292 aa18.34■□□□□ 0.53
PDLIM5-205ENST00000380180 ZNF141Q15928 474 aa18.34■□□□□ 0.53
PDLIM5-205ENST00000380180 TRIM61Q5EBN2 209 aa18.34■□□□□ 0.53
PDLIM5-205ENST00000380180 ACSM5Q6NUN0 579 aa18.34■□□□□ 0.53
PDLIM5-205ENST00000380180 DTWD2Q8NBA8 298 aa18.34■□□□□ 0.53
PDLIM5-205ENST00000380180 B3GNT7Q8NFL0 401 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms