RNA–Protein interactions for RNA: ENST00000378610.1

CDKAL1-202, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKAL1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-202ENST00000378610 HMGCS1Q01581 520 aa6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 CRYZQ08257 329 aaKnown RBP6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 LY6KQ17RY6 165 aa6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 PAQR6Q6TCH4 344 aa6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 C3P1Q6ZMU1 363 aa6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 PTCHD4Q6ZW05 846 aa6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 NR2C2APQ86WQ0 139 aa6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 LRRC28Q86X40 367 aaPredicted RBP6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 FAM98AQ8NCA5 519 aaKnown RBP6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 HASPINQ8TF76 798 aa6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 NSMAFQ92636 917 aa6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 VOPP1Q96AW1 172 aa6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 ERMAPQ96PL5 475 aaPredicted RBP6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 HBEGFQ99075 208 aa6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 SPATA5L1Q9BVQ7 753 aa6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 POLDIP3Q9BY77 421 aaKnown RBP6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 FN3KQ9H479 309 aa6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 ELOVL6Q9H5J4 265 aa6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 PDGFCQ9NRA1 345 aa6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 UXTQ9UBK9 157 aaPredicted RBP6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 BAIAP2Q9UQB8 552 aa6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 CHST2Q9Y4C5 530 aa6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 SMIM30A4D0T7 59 aa6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 GSTZ1O43708 216 aaPredicted RBP6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 GATCO43716 136 aaKnown RBP6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 PTBP3O95758 552 aaKnown RBP6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 PEPDP12955 493 aa6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 EGR1P18146 543 aa6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 ELK1P19419 428 aa6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 PPIBP23284 216 aaKnown RBP6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 DNASE1P24855 282 aa6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 TACR1P25103 407 aa6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 SSTR2P30874 369 aa6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 CTBP2P56545 445 aa6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 LILRA4P59901 499 aa6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 WDR5P61964 334 aaKnown RBP6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 SRSF11Q05519 484 aaKnown RBP6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 SOX4Q06945 474 aaPredicted RBP6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 RGNQ15493 299 aa6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 TAF1AQ15573 450 aaPredicted RBP6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 TSC22D1Q15714 1073 aa6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 AADACL4Q5VUY2 407 aa6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 METTL11BQ5VVY1 283 aa6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 RAET1GQ6H3X3 334 aa6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 FAM83HQ6ZRV2 1179 aaPredicted RBP6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 OAFQ86UD1 273 aa6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 CPXM2Q8N436 756 aa6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 SYT14Q8NB59 555 aa6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 FAM71CQ8NEG0 241 aa6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 OR4K2Q8NGD2 314 aa6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 C19orf43Q9BQ61 176 aa6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 SEC22CQ9BRL7 303 aa6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 THAP7Q9BT49 309 aaPredicted RBP6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 NSUN3Q9H649 340 aaKnown RBP6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 NMUR1Q9HB89 426 aa6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 SARS2Q9NP81 518 aaKnown RBP6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 NANSQ9NR45 359 aa6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 CA5BQ9Y2D0 317 aa6.25□□□□□ -1.41
CDKAL1-202ENST00000378610 LINC00587B1AMM8 73 aa6.24□□□□□ -1.41
CDKAL1-202ENST00000378610 NEDD8-MDP1E9PL57 170 aa6.24□□□□□ -1.41
CDKAL1-202ENST00000378610 TLR4O00206 839 aa6.24□□□□□ -1.41
CDKAL1-202ENST00000378610 WNT10BO00744 389 aa6.24□□□□□ -1.41
CDKAL1-202ENST00000378610 CTDSPLO15194 276 aa6.24□□□□□ -1.41
CDKAL1-202ENST00000378610 TNFSF14O43557 240 aa6.24□□□□□ -1.41
CDKAL1-202ENST00000378610 IFNA4P05014 189 aa6.24□□□□□ -1.41
CDKAL1-202ENST00000378610 SPARCP09486 303 aa6.24□□□□□ -1.41
CDKAL1-202ENST00000378610 CKBP12277 381 aa6.24□□□□□ -1.41
CDKAL1-202ENST00000378610 ITGALP20701 1170 aa6.24□□□□□ -1.41
CDKAL1-202ENST00000378610 PRPS1L1P21108 318 aa6.24□□□□□ -1.41
CDKAL1-202ENST00000378610 OPRD1P41143 372 aa6.24□□□□□ -1.41
CDKAL1-202ENST00000378610 SELENOPP49908 381 aa6.24□□□□□ -1.41
CDKAL1-202ENST00000378610 CSTF1Q05048 431 aaKnown RBP6.24□□□□□ -1.41
CDKAL1-202ENST00000378610 MXD1Q05195 221 aa6.24□□□□□ -1.41
CDKAL1-202ENST00000378610 LMAN2Q12907 356 aa6.24□□□□□ -1.41
CDKAL1-202ENST00000378610 C1DQ13901 141 aaKnown RBP6.24□□□□□ -1.41
CDKAL1-202ENST00000378610 IL18Q14116 193 aa6.24□□□□□ -1.41
CDKAL1-202ENST00000378610 ZNF284Q2VY69 593 aa6.24□□□□□ -1.41
CDKAL1-202ENST00000378610 IFI44LQ53G44 452 aa6.24□□□□□ -1.41
CDKAL1-202ENST00000378610 C9orf152Q5JTZ5 239 aa6.24□□□□□ -1.41
CDKAL1-202ENST00000378610 EOGTQ5NDL2 527 aa6.24□□□□□ -1.41
CDKAL1-202ENST00000378610 TMIGD1Q6UXZ0 262 aa6.24□□□□□ -1.41
CDKAL1-202ENST00000378610 L3MBTL4Q8NA19 623 aa6.24□□□□□ -1.41
CDKAL1-202ENST00000378610 OR8J1Q8NGP2 316 aa6.24□□□□□ -1.41
CDKAL1-202ENST00000378610 RFT1Q96AA3 541 aa6.24□□□□□ -1.41
CDKAL1-202ENST00000378610 SFXN2Q96NB2 322 aa6.24□□□□□ -1.41
CDKAL1-202ENST00000378610 NAA11Q9BSU3 229 aaPredicted RBP6.24□□□□□ -1.41
CDKAL1-202ENST00000378610 TRIM62Q9BVG3 475 aa6.24□□□□□ -1.41
CDKAL1-202ENST00000378610 EXOSC4Q9NPD3 245 aaKnown RBP6.24□□□□□ -1.41
CDKAL1-202ENST00000378610 ASB6Q9NWX5 421 aa6.24□□□□□ -1.41
CDKAL1-202ENST00000378610 MPP6Q9NZW5 540 aa6.24□□□□□ -1.41
CDKAL1-202ENST00000378610 FBXL3Q9UKT7 428 aa6.24□□□□□ -1.41
CDKAL1-202ENST00000378610 YARS2Q9Y2Z4 477 aaKnown RBP6.24□□□□□ -1.41
CDKAL1-202ENST00000378610 TEX13CA0A0J9YWL9 993 aa6.24□□□□□ -1.41
CDKAL1-202ENST00000378610 A0A1B0GTQ1 180 aa6.24□□□□□ -1.41
CDKAL1-202ENST00000378610 SMIM28A0A1B0GU29 152 aa6.24□□□□□ -1.41
CDKAL1-202ENST00000378610 ANKRD61A6NGH8 418 aa6.24□□□□□ -1.41
CDKAL1-202ENST00000378610 FAM74A7A6NL05 159 aa6.24□□□□□ -1.41
CDKAL1-202ENST00000378610 GABRR3A8MPY1 467 aa6.24□□□□□ -1.41
CDKAL1-202ENST00000378610 HMSDA8MTL9 139 aa6.24□□□□□ -1.41
CDKAL1-202ENST00000378610 FFAR1O14842 300 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms