RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 LINC00471Q8N535 108 aa13.04□□□□□ -0.32
MSH5-202ENST00000375740 CAMKVQ8NCB2 501 aa13.04□□□□□ -0.32
MSH5-202ENST00000375740 CDS1Q92903 461 aa13.04□□□□□ -0.32
MSH5-202ENST00000375740 MGLLQ99685 303 aa13.04□□□□□ -0.32
MSH5-202ENST00000375740 ARHGDIGQ99819 225 aa13.04□□□□□ -0.32
MSH5-202ENST00000375740 ASPNQ9BXN1 380 aa13.04□□□□□ -0.32
MSH5-202ENST00000375740 SNTG1Q9NSN8 517 aa13.04□□□□□ -0.32
MSH5-202ENST00000375740 CALML5Q9NZT1 146 aa13.04□□□□□ -0.32
MSH5-202ENST00000375740 SLC13A4Q9UKG4 626 aa13.04□□□□□ -0.32
MSH5-202ENST00000375740 POLHQ9Y253 713 aa13.04□□□□□ -0.32
MSH5-202ENST00000375740 KLK4Q9Y5K2 254 aa13.04□□□□□ -0.32
MSH5-202ENST00000375740 PRAMEF26H0Y7S4 382 aa13.04□□□□□ -0.32
MSH5-202ENST00000375740 SYT5O00445 386 aa13.04□□□□□ -0.32
MSH5-202ENST00000375740 OR2B3O76000 313 aa13.04□□□□□ -0.32
MSH5-202ENST00000375740 ENPP1P22413 925 aa13.04□□□□□ -0.32
MSH5-202ENST00000375740 ERP29P30040 261 aaKnown RBP13.04□□□□□ -0.32
MSH5-202ENST00000375740 RABIFP47224 123 aa13.04□□□□□ -0.32
MSH5-202ENST00000375740 TAS2R41P59536 307 aa13.04□□□□□ -0.32
MSH5-202ENST00000375740 ID2Q02363 134 aa13.04□□□□□ -0.32
MSH5-202ENST00000375740 TMEM201Q5SNT2 666 aa13.04□□□□□ -0.32
MSH5-202ENST00000375740 PRSS41Q7RTY9 318 aa13.04□□□□□ -0.32
MSH5-202ENST00000375740 RDH10Q8IZV5 341 aa13.04□□□□□ -0.32
MSH5-202ENST00000375740 WDR36Q8NI36 951 aaKnown RBP13.04□□□□□ -0.32
MSH5-202ENST00000375740 ZFPM2Q8WW38 1151 aa13.04□□□□□ -0.32
MSH5-202ENST00000375740 SLC9A6Q92581 669 aa13.04□□□□□ -0.32
MSH5-202ENST00000375740 PMEPA1Q969W9 287 aa13.04□□□□□ -0.32
MSH5-202ENST00000375740 FRMD6Q96NE9 622 aa13.04□□□□□ -0.32
MSH5-202ENST00000375740 ZFYVE21Q9BQ24 234 aa13.04□□□□□ -0.32
MSH5-202ENST00000375740 HRASLS2Q9NWW9 162 aa13.04□□□□□ -0.32
MSH5-202ENST00000375740 NTMQ9P121 344 aa13.04□□□□□ -0.32
MSH5-202ENST00000375740 HSPB11Q9Y547 144 aa13.04□□□□□ -0.32
MSH5-202ENST00000375740 SLC22A7Q9Y694 548 aa13.04□□□□□ -0.32
MSH5-202ENST00000375740 A0A087WUU8 490 aa13.03□□□□□ -0.32
MSH5-202ENST00000375740 CPSF4LA6NMK7 179 aaKnown RBP13.03□□□□□ -0.32
MSH5-202ENST00000375740 A8MUA0 341 aa13.03□□□□□ -0.32
MSH5-202ENST00000375740 C2orf74A8MZ97 194 aa13.03□□□□□ -0.32
MSH5-202ENST00000375740 WWP2O00308 870 aa13.03□□□□□ -0.32
MSH5-202ENST00000375740 PLA2G10O15496 165 aa13.03□□□□□ -0.32
MSH5-202ENST00000375740 TSC22D2O75157 780 aa13.03□□□□□ -0.32
MSH5-202ENST00000375740 CSF3P09919 207 aa13.03□□□□□ -0.32
MSH5-202ENST00000375740 PIPP12273 146 aaPredicted RBP13.03□□□□□ -0.32
MSH5-202ENST00000375740 ZNF250P15622 560 aa13.03□□□□□ -0.32
MSH5-202ENST00000375740 AP2S1P53680 142 aaPredicted RBP13.03□□□□□ -0.32
MSH5-202ENST00000375740 MXD1Q05195 221 aa13.03□□□□□ -0.32
MSH5-202ENST00000375740 GINS1Q14691 196 aa13.03□□□□□ -0.32
MSH5-202ENST00000375740 HEPHL1Q6MZM0 1159 aa13.03□□□□□ -0.32
MSH5-202ENST00000375740 ACSM5Q6NUN0 579 aa13.03□□□□□ -0.32
MSH5-202ENST00000375740 CDC73Q6P1J9 531 aa13.03□□□□□ -0.32
MSH5-202ENST00000375740 USP53Q70EK8 1073 aa13.03□□□□□ -0.32
MSH5-202ENST00000375740 ABHD13Q7L211 337 aa13.03□□□□□ -0.32
MSH5-202ENST00000375740 ZNF367Q7RTV3 350 aa13.03□□□□□ -0.32
MSH5-202ENST00000375740 PRICKLE2Q7Z3G6 844 aa13.03□□□□□ -0.32
MSH5-202ENST00000375740 CAMKK1Q8N5S9 505 aa13.03□□□□□ -0.32
MSH5-202ENST00000375740 OR8J1Q8NGP2 316 aa13.03□□□□□ -0.32
MSH5-202ENST00000375740 OR52P1PQ8NH57 321 aa13.03□□□□□ -0.32
MSH5-202ENST00000375740 RERGQ96A58 199 aaPredicted RBP13.03□□□□□ -0.32
MSH5-202ENST00000375740 MS4A4EQ96PG1 132 aa13.03□□□□□ -0.32
MSH5-202ENST00000375740 RNF121Q9H920 327 aa13.03□□□□□ -0.32
MSH5-202ENST00000375740 SEMA4GQ9NTN9 838 aa13.03□□□□□ -0.32
MSH5-202ENST00000375740 USP36Q9P275 1121 aaKnown RBP13.03□□□□□ -0.32
MSH5-202ENST00000375740 A0A075B6Q4 140 aa13.03□□□□□ -0.32
MSH5-202ENST00000375740 SMIM30A4D0T7 59 aa13.03□□□□□ -0.32
MSH5-202ENST00000375740 DUXAA6NLW8 204 aa13.03□□□□□ -0.32
MSH5-202ENST00000375740 TRIM77I1YAP6 450 aa13.03□□□□□ -0.32
MSH5-202ENST00000375740 NTN1O95631 604 aa13.03□□□□□ -0.32
MSH5-202ENST00000375740 TRHRP34981 398 aaPredicted RBP13.03□□□□□ -0.32
MSH5-202ENST00000375740 SOX18P35713 384 aa13.03□□□□□ -0.32
MSH5-202ENST00000375740 AVPR1BP47901 424 aa13.03□□□□□ -0.32
MSH5-202ENST00000375740 GIPRP48546 466 aa13.03□□□□□ -0.32
MSH5-202ENST00000375740 EIF2B5Q13144 721 aaKnown RBP13.03□□□□□ -0.32
MSH5-202ENST00000375740 NDUFA9Q16795 377 aa13.03□□□□□ -0.32
MSH5-202ENST00000375740 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.03□□□□□ -0.32
MSH5-202ENST00000375740 TRMT12Q53H54 448 aaKnown RBP13.03□□□□□ -0.32
MSH5-202ENST00000375740 ZNF761Q86XN6 746 aaPredicted RBP13.03□□□□□ -0.32
MSH5-202ENST00000375740 SAMD14Q8IZD0 417 aaPredicted RBP13.03□□□□□ -0.32
MSH5-202ENST00000375740 VWA5B2Q8N398 1253 aa13.03□□□□□ -0.32
MSH5-202ENST00000375740 BAHD1Q8TBE0 780 aaPredicted RBP13.03□□□□□ -0.32
MSH5-202ENST00000375740 ZNF576Q9H609 170 aa13.03□□□□□ -0.32
MSH5-202ENST00000375740 POT1Q9NUX5 634 aa13.03□□□□□ -0.32
MSH5-202ENST00000375740 FBXO9Q9UK97 447 aaPredicted RBP13.03□□□□□ -0.32
MSH5-202ENST00000375740 CYP8B1Q9UNU6 501 aa13.03□□□□□ -0.32
MSH5-202ENST00000375740 SPTBN5Q9NRC6 3674 aaKnown RBP13.02□□□□□ -0.32
MSH5-202ENST00000375740 CIB4A0PJX0 185 aa13.02□□□□□ -0.32
MSH5-202ENST00000375740 C10orf142B7Z368 130 aa13.02□□□□□ -0.32
MSH5-202ENST00000375740 TLX2O43763 284 aaPredicted RBP13.02□□□□□ -0.32
MSH5-202ENST00000375740 PRKYO43930 277 aa13.02□□□□□ -0.32
MSH5-202ENST00000375740 CPMP14384 443 aa13.02□□□□□ -0.32
MSH5-202ENST00000375740 NAGAP17050 411 aa13.02□□□□□ -0.32
MSH5-202ENST00000375740 SOX3P41225 446 aa13.02□□□□□ -0.32
MSH5-202ENST00000375740 MLLT3P42568 568 aaPredicted RBP13.02□□□□□ -0.32
MSH5-202ENST00000375740 UBE2IP63279 158 aaKnown RBP13.02□□□□□ -0.32
MSH5-202ENST00000375740 ENTPD8Q5MY95 495 aa13.02□□□□□ -0.32
MSH5-202ENST00000375740 OR2L13Q8N349 312 aa13.02□□□□□ -0.32
MSH5-202ENST00000375740 SLC37A2Q8TED4 501 aa13.02□□□□□ -0.32
MSH5-202ENST00000375740 TOE1Q96GM8 510 aaKnown RBP13.02□□□□□ -0.32
MSH5-202ENST00000375740 GSDMCQ9BYG8 508 aa13.02□□□□□ -0.32
MSH5-202ENST00000375740 SLC22A4Q9H015 551 aa13.02□□□□□ -0.32
MSH5-202ENST00000375740 C12orf10Q9HB07 376 aa13.02□□□□□ -0.32
MSH5-202ENST00000375740 NDRG2Q9UN36 371 aaKnown RBP13.02□□□□□ -0.32
MSH5-202ENST00000375740 NTNG1Q9Y2I2 539 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms