RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 POU2F2P09086 479 aa13.56□□□□□ -0.24
MSH5-201ENST00000375703 C5AR1P21730 350 aa13.56□□□□□ -0.24
MSH5-201ENST00000375703 RIN1Q13671 783 aa13.56□□□□□ -0.24
MSH5-201ENST00000375703 SF3A2Q15428 464 aaKnown RBP13.56□□□□□ -0.24
MSH5-201ENST00000375703 YIF1BQ5BJH7 314 aa13.56□□□□□ -0.24
MSH5-201ENST00000375703 IDNKQ5T6J7 187 aa13.56□□□□□ -0.24
MSH5-201ENST00000375703 ZNF57Q68EA5 555 aaPredicted RBP13.56□□□□□ -0.24
MSH5-201ENST00000375703 ZNF836Q6ZNA1 936 aa13.56□□□□□ -0.24
MSH5-201ENST00000375703 VASH1Q7L8A9 365 aaPredicted RBP13.56□□□□□ -0.24
MSH5-201ENST00000375703 ZFPM2Q8WW38 1151 aa13.56□□□□□ -0.24
MSH5-201ENST00000375703 C10orf90Q96M02 699 aa13.56□□□□□ -0.24
MSH5-201ENST00000375703 RIPOR3Q96MK2 946 aa13.56□□□□□ -0.24
MSH5-201ENST00000375703 MS4A4EQ96PG1 132 aa13.56□□□□□ -0.24
MSH5-201ENST00000375703 KCNJ15Q99712 375 aa13.56□□□□□ -0.24
MSH5-201ENST00000375703 JAM3Q9BX67 310 aa13.56□□□□□ -0.24
MSH5-201ENST00000375703 SYNDIG1Q9H7V2 258 aa13.56□□□□□ -0.24
MSH5-201ENST00000375703 BABAM2Q9NXR7 383 aa13.56□□□□□ -0.24
MSH5-201ENST00000375703 KLHL21Q9UJP4 597 aa13.56□□□□□ -0.24
MSH5-201ENST00000375703 SLC17A4Q9Y2C5 497 aa13.56□□□□□ -0.24
MSH5-201ENST00000375703 C12orf71A8MTZ7 269 aa13.55□□□□□ -0.24
MSH5-201ENST00000375703 J3QRE1 110 aa13.55□□□□□ -0.24
MSH5-201ENST00000375703 RNGTTO60942 597 aaKnown RBP13.55□□□□□ -0.24
MSH5-201ENST00000375703 FAM157BP0CG42 384 aa13.55□□□□□ -0.24
MSH5-201ENST00000375703 ZNF888P0CJ79 500 aaPredicted RBP13.55□□□□□ -0.24
MSH5-201ENST00000375703 GALP22466 123 aa13.55□□□□□ -0.24
MSH5-201ENST00000375703 ADAM15Q13444 863 aa13.55□□□□□ -0.24
MSH5-201ENST00000375703 RUNX3Q13761 415 aa13.55□□□□□ -0.24
MSH5-201ENST00000375703 GPR68Q15743 365 aa13.55□□□□□ -0.24
MSH5-201ENST00000375703 ARHGAP11BQ3KRB8 267 aa13.55□□□□□ -0.24
MSH5-201ENST00000375703 LSRQ86X29 649 aaPredicted RBP13.55□□□□□ -0.24
MSH5-201ENST00000375703 GID4Q8IVV7 300 aa13.55□□□□□ -0.24
MSH5-201ENST00000375703 OR4N5Q8IXE1 308 aa13.55□□□□□ -0.24
MSH5-201ENST00000375703 TCTE3Q8IZS6 198 aa13.55□□□□□ -0.24
MSH5-201ENST00000375703 TBX5Q99593 518 aa13.55□□□□□ -0.24
MSH5-201ENST00000375703 C1QTNF2Q9BXJ5 285 aa13.55□□□□□ -0.24
MSH5-201ENST00000375703 DPH1Q9BZG8 443 aa13.55□□□□□ -0.24
MSH5-201ENST00000375703 KCNN2Q9H2S1 579 aa13.55□□□□□ -0.24
MSH5-201ENST00000375703 OR52D1Q9H346 318 aa13.55□□□□□ -0.24
MSH5-201ENST00000375703 MED20Q9H944 212 aa13.55□□□□□ -0.24
MSH5-201ENST00000375703 COLEC10Q9Y6Z7 277 aa13.55□□□□□ -0.24
MSH5-201ENST00000375703 ZC3H12DA2A288 527 aaKnown RBP13.55□□□□□ -0.24
MSH5-201ENST00000375703 LINC01553A4QN01 128 aa13.55□□□□□ -0.24
MSH5-201ENST00000375703 UNC119BA6NIH7 251 aa13.55□□□□□ -0.24
MSH5-201ENST00000375703 RGS9O75916 674 aaPredicted RBP13.55□□□□□ -0.24
MSH5-201ENST00000375703 ADH1BP00325 375 aa13.55□□□□□ -0.24
MSH5-201ENST00000375703 ZGLP1P0C6A0 271 aa13.55□□□□□ -0.24
MSH5-201ENST00000375703 ELK1P19419 428 aa13.55□□□□□ -0.24
MSH5-201ENST00000375703 SOX9P48436 509 aa13.55□□□□□ -0.24
MSH5-201ENST00000375703 RPS21P63220 83 aaKnown RBP13.55□□□□□ -0.24
MSH5-201ENST00000375703 CSTF1Q05048 431 aaKnown RBP13.55□□□□□ -0.24
MSH5-201ENST00000375703 RGS1Q08116 209 aa13.55□□□□□ -0.24
MSH5-201ENST00000375703 TANGO2Q6ICL3 276 aa13.55□□□□□ -0.24
MSH5-201ENST00000375703 SMARCD3Q6STE5 483 aa13.55□□□□□ -0.24
MSH5-201ENST00000375703 MEPCEQ7L2J0 689 aaKnown RBP13.55□□□□□ -0.24
MSH5-201ENST00000375703 OR4K14Q8NGD5 310 aa13.55□□□□□ -0.24
MSH5-201ENST00000375703 ACOT12Q8WYK0 555 aa13.55□□□□□ -0.24
MSH5-201ENST00000375703 GAL3ST3Q96A11 431 aa13.55□□□□□ -0.24
MSH5-201ENST00000375703 RPRD1BQ9NQG5 326 aaKnown RBP13.55□□□□□ -0.24
MSH5-201ENST00000375703 NTMQ9P121 344 aa13.55□□□□□ -0.24
MSH5-201ENST00000375703 SIRT4Q9Y6E7 314 aaPredicted RBP13.55□□□□□ -0.24
MSH5-201ENST00000375703 MAU2Q9Y6X3 613 aa13.55□□□□□ -0.24
MSH5-201ENST00000375703 LOC102723532A0A0G2JNH3 316 aa13.55□□□□□ -0.24
MSH5-201ENST00000375703 PRR19A6NJB7 356 aa13.55□□□□□ -0.24
MSH5-201ENST00000375703 ERP29P30040 261 aaKnown RBP13.55□□□□□ -0.24
MSH5-201ENST00000375703 CLDN20P56880 219 aa13.55□□□□□ -0.24
MSH5-201ENST00000375703 BDH1Q02338 343 aa13.55□□□□□ -0.24
MSH5-201ENST00000375703 FAPQ12884 760 aa13.55□□□□□ -0.24
MSH5-201ENST00000375703 DUSP5Q16690 384 aa13.55□□□□□ -0.24
MSH5-201ENST00000375703 C2orf27AQ580R0 203 aa13.55□□□□□ -0.24
MSH5-201ENST00000375703 SNAP47Q5SQN1 464 aa13.55□□□□□ -0.24
MSH5-201ENST00000375703 VN1R4Q7Z5H5 301 aa13.55□□□□□ -0.24
MSH5-201ENST00000375703 AMIGO1Q86WK6 493 aa13.55□□□□□ -0.24
MSH5-201ENST00000375703 LCN9Q8WX39 176 aa13.55□□□□□ -0.24
MSH5-201ENST00000375703 SDF2Q99470 211 aa13.55□□□□□ -0.24
MSH5-201ENST00000375703 MARVELD1Q9BSK0 173 aa13.55□□□□□ -0.24
MSH5-201ENST00000375703 WACQ9BTA9 647 aa13.55□□□□□ -0.24
MSH5-201ENST00000375703 ALG8Q9BVK2 526 aa13.55□□□□□ -0.24
MSH5-201ENST00000375703 SLC17A9Q9BYT1 436 aa13.55□□□□□ -0.24
MSH5-201ENST00000375703 EXTL2Q9UBQ6 330 aa13.55□□□□□ -0.24
MSH5-201ENST00000375703 DOCK9Q9BZ29 2069 aa13.54□□□□□ -0.24
MSH5-201ENST00000375703 DAPL1A0PJW8 107 aa13.54□□□□□ -0.24
MSH5-201ENST00000375703 SGK494L7N484 410 aa13.54□□□□□ -0.24
MSH5-201ENST00000375703 NARSO43776 548 aaKnown RBP13.54□□□□□ -0.24
MSH5-201ENST00000375703 TRIM3O75382 744 aaPredicted RBP13.54□□□□□ -0.24
MSH5-201ENST00000375703 BMP7P18075 431 aa13.54□□□□□ -0.24
MSH5-201ENST00000375703 FUT1P19526 365 aa13.54□□□□□ -0.24
MSH5-201ENST00000375703 MTNR1BP49286 362 aa13.54□□□□□ -0.24
MSH5-201ENST00000375703 ZNF136P52737 540 aa13.54□□□□□ -0.24
MSH5-201ENST00000375703 DUSP8Q13202 625 aa13.54□□□□□ -0.24
MSH5-201ENST00000375703 CCDC85BQ15834 202 aaPredicted RBP13.54□□□□□ -0.24
MSH5-201ENST00000375703 CCNJQ5T5M9 372 aa13.54□□□□□ -0.24
MSH5-201ENST00000375703 TIGD3Q6B0B8 471 aa13.54□□□□□ -0.24
MSH5-201ENST00000375703 SYCE2Q6PIF2 218 aa13.54□□□□□ -0.24
MSH5-201ENST00000375703 TRILQ7L0X0 811 aa13.54□□□□□ -0.24
MSH5-201ENST00000375703 RANBP3LQ86VV4 465 aaPredicted RBP13.54□□□□□ -0.24
MSH5-201ENST00000375703 OR52L1Q8NGH7 329 aa13.54□□□□□ -0.24
MSH5-201ENST00000375703 BRIX1Q8TDN6 353 aaKnown RBP13.54□□□□□ -0.24
MSH5-201ENST00000375703 UPRTQ96BW1 309 aa13.54□□□□□ -0.24
MSH5-201ENST00000375703 CD180Q99467 661 aa13.54□□□□□ -0.24
MSH5-201ENST00000375703 PRSS27Q9BQR3 290 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms