RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 ARMC10Q8N2F6 343 aa13.81□□□□□ -0.2
LMO4-201ENST00000370542 OR5T3Q8NGG3 340 aa13.81□□□□□ -0.2
LMO4-201ENST00000370542 SUN3Q8TAQ9 357 aa13.81□□□□□ -0.2
LMO4-201ENST00000370542 ZCCHC10Q8TBK6 192 aa13.81□□□□□ -0.2
LMO4-201ENST00000370542 ELP5Q8TE02 316 aa13.81□□□□□ -0.2
LMO4-201ENST00000370542 SLC5A11Q8WWX8 675 aa13.81□□□□□ -0.2
LMO4-201ENST00000370542 PEX11GQ96HA9 241 aa13.81□□□□□ -0.2
LMO4-201ENST00000370542 PYURFQ96I23 114 aa13.81□□□□□ -0.2
LMO4-201ENST00000370542 MAGEB10Q96LZ2 347 aaPredicted RBP13.81□□□□□ -0.2
LMO4-201ENST00000370542 PITX2Q99697 317 aa13.81□□□□□ -0.2
LMO4-201ENST00000370542 SLC6A16Q9GZN6 736 aa13.81□□□□□ -0.2
LMO4-201ENST00000370542 SPNS1Q9H2V7 528 aa13.81□□□□□ -0.2
LMO4-201ENST00000370542 TRIM45Q9H8W5 580 aaPredicted RBP13.81□□□□□ -0.2
LMO4-201ENST00000370542 PELI2Q9HAT8 420 aa13.81□□□□□ -0.2
LMO4-201ENST00000370542 NUDT4Q9NZJ9 180 aa13.81□□□□□ -0.2
LMO4-201ENST00000370542 ERVK-18Q9QC07 812 aa13.81□□□□□ -0.2
LMO4-201ENST00000370542 GMPPBQ9Y5P6 360 aa13.81□□□□□ -0.2
LMO4-201ENST00000370542 PMF1-BGLAPU3KQ54 211 aa13.81□□□□□ -0.2
LMO4-201ENST00000370542 SPG11Q96JI7 2443 aa13.81□□□□□ -0.2
LMO4-201ENST00000370542 CENPXA8MT69 81 aa13.8□□□□□ -0.2
LMO4-201ENST00000370542 NOTOA8MTQ0 251 aa13.8□□□□□ -0.2
LMO4-201ENST00000370542 NDUFS4O43181 175 aa13.8□□□□□ -0.2
LMO4-201ENST00000370542 CHST10O43529 356 aa13.8□□□□□ -0.2
LMO4-201ENST00000370542 AIREO43918 545 aa13.8□□□□□ -0.2
LMO4-201ENST00000370542 NCF1P14598 390 aaPredicted RBP13.8□□□□□ -0.2
LMO4-201ENST00000370542 TSPAN8P19075 237 aa13.8□□□□□ -0.2
LMO4-201ENST00000370542 FPR1P21462 350 aa13.8□□□□□ -0.2
LMO4-201ENST00000370542 CD96P40200 585 aa13.8□□□□□ -0.2
LMO4-201ENST00000370542 CA7P43166 264 aa13.8□□□□□ -0.2
LMO4-201ENST00000370542 FOXA1P55317 472 aa13.8□□□□□ -0.2
LMO4-201ENST00000370542 VBP1P61758 197 aa13.8□□□□□ -0.2
LMO4-201ENST00000370542 SKP1P63208 163 aa13.8□□□□□ -0.2
LMO4-201ENST00000370542 REEP5Q00765 189 aa13.8□□□□□ -0.2
LMO4-201ENST00000370542 MEF2AQ02078 507 aaPredicted RBP13.8□□□□□ -0.2
LMO4-201ENST00000370542 ABRAXAS2Q15018 415 aa13.8□□□□□ -0.2
LMO4-201ENST00000370542 NSDHLQ15738 373 aa13.8□□□□□ -0.2
LMO4-201ENST00000370542 TBCEQ15813 527 aaPredicted RBP13.8□□□□□ -0.2
LMO4-201ENST00000370542 ZNF766Q5HY98 468 aa13.8□□□□□ -0.2
LMO4-201ENST00000370542 C6orf183Q5T699 404 aa13.8□□□□□ -0.2
LMO4-201ENST00000370542 XKRXQ6PP77 449 aa13.8□□□□□ -0.2
LMO4-201ENST00000370542 CYP20A1Q6UW02 462 aa13.8□□□□□ -0.2
LMO4-201ENST00000370542 QSOX2Q6ZRP7 698 aa13.8□□□□□ -0.2
LMO4-201ENST00000370542 ZBTB46Q86UZ6 589 aa13.8□□□□□ -0.2
LMO4-201ENST00000370542 FJX1Q86VR8 437 aa13.8□□□□□ -0.2
LMO4-201ENST00000370542 BEST3Q8N1M1 668 aa13.8□□□□□ -0.2
LMO4-201ENST00000370542 ANKRD53Q8N9V6 530 aa13.8□□□□□ -0.2
LMO4-201ENST00000370542 UTP15Q8TED0 518 aaKnown RBP13.8□□□□□ -0.2
LMO4-201ENST00000370542 THAP3Q8WTV1 239 aaPredicted RBP13.8□□□□□ -0.2
LMO4-201ENST00000370542 FIG4Q92562 907 aa13.8□□□□□ -0.2
LMO4-201ENST00000370542 EXT2Q93063 718 aa13.8□□□□□ -0.2
LMO4-201ENST00000370542 TP53INP1Q96A56 240 aa13.8□□□□□ -0.2
LMO4-201ENST00000370542 SIGLEC12Q96PQ1 595 aa13.8□□□□□ -0.2
LMO4-201ENST00000370542 LPAR4Q99677 370 aa13.8□□□□□ -0.2
LMO4-201ENST00000370542 MARCH7Q9H992 704 aa13.8□□□□□ -0.2
LMO4-201ENST00000370542 OPTCQ9UBM4 332 aa13.8□□□□□ -0.2
LMO4-201ENST00000370542 TMEFF2Q9UIK5 374 aaPredicted RBP13.8□□□□□ -0.2
LMO4-201ENST00000370542 RPS6KA6Q9UK32 745 aa13.8□□□□□ -0.2
LMO4-201ENST00000370542 PCTPQ9UKL6 214 aa13.8□□□□□ -0.2
LMO4-201ENST00000370542 MED13LQ71F56 2210 aa13.8□□□□□ -0.2
LMO4-201ENST00000370542 IGKV3D-11A0A0A0MRZ8 115 aa13.79□□□□□ -0.2
LMO4-201ENST00000370542 TPD52L2O43399 206 aaKnown RBP13.79□□□□□ -0.2
LMO4-201ENST00000370542 WISP2O76076 250 aa13.79□□□□□ -0.2
LMO4-201ENST00000370542 MT-ND2P03891 347 aa13.79□□□□□ -0.2
LMO4-201ENST00000370542 HOXB4P17483 251 aaPredicted RBP13.79□□□□□ -0.2
LMO4-201ENST00000370542 PTX3P26022 381 aaPredicted RBP13.79□□□□□ -0.2
LMO4-201ENST00000370542 DNAJA1P31689 397 aaKnown RBP13.79□□□□□ -0.2
LMO4-201ENST00000370542 PIGAP37287 484 aa13.79□□□□□ -0.2
LMO4-201ENST00000370542 SLC26A5P58743 744 aa13.79□□□□□ -0.2
LMO4-201ENST00000370542 COPZ1P61923 177 aa13.79□□□□□ -0.2
LMO4-201ENST00000370542 RGS1Q08116 209 aa13.79□□□□□ -0.2
LMO4-201ENST00000370542 MAPK11Q15759 364 aa13.79□□□□□ -0.2
LMO4-201ENST00000370542 DEFB134Q4QY38 66 aa13.79□□□□□ -0.2
LMO4-201ENST00000370542 RUNDC3AQ59EK9 446 aa13.79□□□□□ -0.2
LMO4-201ENST00000370542 SPANXN2Q5MJ10 180 aa13.79□□□□□ -0.2
LMO4-201ENST00000370542 CCNJQ5T5M9 372 aa13.79□□□□□ -0.2
LMO4-201ENST00000370542 MFSD4BQ5TF39 518 aa13.79□□□□□ -0.2
LMO4-201ENST00000370542 STEAP3Q658P3 488 aa13.79□□□□□ -0.2
LMO4-201ENST00000370542 NXPE4Q6UWF7 544 aa13.79□□□□□ -0.2
LMO4-201ENST00000370542 GFRALQ6UXV0 394 aa13.79□□□□□ -0.2
LMO4-201ENST00000370542 SPNS3Q6ZMD2 512 aa13.79□□□□□ -0.2
LMO4-201ENST00000370542 THOC6Q86W42 341 aaKnown RBP13.79□□□□□ -0.2
LMO4-201ENST00000370542 TBC1D19Q8N5T2 526 aa13.79□□□□□ -0.2
LMO4-201ENST00000370542 ZNF540Q8NDQ6 660 aa13.79□□□□□ -0.2
LMO4-201ENST00000370542 FBXO30Q8TB52 745 aa13.79□□□□□ -0.2
LMO4-201ENST00000370542 CREB3L4Q8TEY5 395 aa13.79□□□□□ -0.2
LMO4-201ENST00000370542 ITLN2Q8WWU7 325 aaPredicted RBP13.79□□□□□ -0.2
LMO4-201ENST00000370542 TSLPQ969D9 159 aa13.79□□□□□ -0.2
LMO4-201ENST00000370542 AICDAQ9GZX7 198 aa13.79□□□□□ -0.2
LMO4-201ENST00000370542 RACGAP1Q9H0H5 632 aa13.79□□□□□ -0.2
LMO4-201ENST00000370542 SEMA4BQ9NPR2 832 aaPredicted RBP13.79□□□□□ -0.2
LMO4-201ENST00000370542 SEC14L3Q9UDX4 400 aa13.79□□□□□ -0.2
LMO4-201ENST00000370542 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.79□□□□□ -0.2
LMO4-201ENST00000370542 NDRG4Q9ULP0 352 aaKnown RBP13.79□□□□□ -0.2
LMO4-201ENST00000370542 ZNF835Q9Y2P0 537 aa13.79□□□□□ -0.2
LMO4-201ENST00000370542 KLF2Q9Y5W3 355 aaPredicted RBP13.79□□□□□ -0.2
LMO4-201ENST00000370542 LYVE1Q9Y5Y7 322 aa13.79□□□□□ -0.2
LMO4-201ENST00000370542 NCOA6Q14686 2063 aaPredicted RBP13.79□□□□□ -0.2
LMO4-201ENST00000370542 CCDC168Q8NDH2 2452 aa13.79□□□□□ -0.2
LMO4-201ENST00000370542 A0A075B6Q4 140 aa13.78□□□□□ -0.2
LMO4-201ENST00000370542 TCRBV16S1A1N1A0A5B0 115 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms